RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Ubl5Q9EPV8 73 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ighv1-9A0A0A6YW37 117 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ighv1-20A0A0A6YX66 117 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Igkv4-53A0A0G2JFC6 119 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P04946 108 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 B230307C23RikQ8BLB2 64 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 March3Q8BRX9 218 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm28539A0A087WSL9 92 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Zcchc24B2RVL6 241 aaKnown RBP11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01741 114 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ly6g6dQ9Z1Q3 135 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ighv1-69A0A0G2JFS5 117 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Igkv6-23A0A140T8N5 115 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Vwc2lQ505H4 222 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm10384Q3UQ87 92 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Olfr313Q5NC55 308 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Igf2rQ07113 2483 aaKnown RBP11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Lect2O88803 151 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Sdhaf1Q3U276 118 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Cysrt1Q9D1E4 142 aa11.67□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01723 117 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Rpl36aP83882 106 aaKnown RBP11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Dock8Q8C147 2100 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Cdkn1aP39689 159 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Srsf2Q62093 221 aaKnown RBP11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Rbmy1bQ60990 380 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm5468Q8C3D3 155 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Lage3Q9CR70 148 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Klf13Q9JJZ6 289 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ank3G5E8K5 1961 aa11.66□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Zfp36P22893 319 aaKnown RBP11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Znf740Q6NZQ6 180 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Casp8ap2Q9WUF3 1962 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 B1ARW8 110 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01674 108 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ifi27l2aQ8R412 90 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Igkv5-37A0A140T8N4 115 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01649 108 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ccl6P27784 116 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Tmem258P61166 79 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Lgals4Q8K419 326 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ifitm1Q9D103 106 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 CtrlQ9ER05 264 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm15294V9GXA7 121 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm2174F6ZVF2 133 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 CntfrO88507 372 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Ighv1-62-3P01754 117 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Foxc1Q61572 553 aa11.65□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm15093A2BI72 449 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Gm15085Q62012 449 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Gm29666A0A087WQ99 126 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Cxcl13O55038 109 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Gm10295Q8CCF3 114 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Fhl3Q9R059 289 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Igkv4-70A0A0B4J1I5 116 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Tctex1d4Q8CDY7 219 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 1700001C19RikQ8K168 210 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Gm12830F6XVH0 157 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Taf15Q8BQ46 557 aaKnown RBP11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Fam110aQ8R184 296 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 GlrxQ9QUH0 107 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Loxhd1C8YR32 2068 aa11.64□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Zfp951A0A087WRH0 451 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Tmem243B2RVB9 118 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Atp5g3P56384 141 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Usmg5Q78IK2 58 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Atp5g1Q9CR84 136 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Atg2aQ6P4T0 1914 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Ighv1-81A0A075B5Y4 117 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Trav4d-3A0A075B625 110 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Iglv1A0A075B663 117 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Lyg1Q9D7Q0 197 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Ighv1-80A0A075B5Y3 117 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Trav6-4A0A075B6B4 115 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Ighv3-6P18531 116 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Igkv20-101-2A0A0G2JDU3 113 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Zfp648D3Z0W3 525 aa11.63□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Dock4P59764 1978 aa11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 7420426K07RikQ3UX66 186 aa11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Lamtor3O88653 124 aa11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Mpv17l2Q8VIK2 200 aa11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 PpdpfQ9CR37 115 aa11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 MylkQ6PDN3 1941 aaKnown RBP11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Znrd1Q791N7 123 aa11.62□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Spink1P09036 80 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Tcf15Q60756 195 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Ighv3-8A0A075B5T0 131 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Ighv2-6A0A075B6A7 116 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Gatd1Q8BFQ8 220 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 P01630 113 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Olfr311Q5NC59 308 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Rpl32P62911 135 aaKnown RBP11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Rchy1Q9CR50 261 aa11.61□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Parp4E9PYK3 1969 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 P01837 106 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Svs5P30933 122 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 9930022D16RikQ8BG27 128 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Tanc1Q0VGY8 1856 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Dpm3Q9D1Q4 92 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Ighv1-55A0A075B5W6 117 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms