RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ZNF706Q9Y5V0 76 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-223ENST00000641597 LRP1BQ9NZR2 4599 aa9.93□□□□□ -0.82
PHGDH-223ENST00000641597 IGLV7-43P04211 117 aa9.92□□□□□ -0.82
PHGDH-223ENST00000641597 CD164Q04900 197 aa9.92□□□□□ -0.82
PHGDH-223ENST00000641597 Q1T7F1 81 aa9.92□□□□□ -0.82
PHGDH-223ENST00000641597 A8MUN3 132 aa9.9□□□□□ -0.82
PHGDH-223ENST00000641597 H3BPC8 53 aa9.89□□□□□ -0.83
PHGDH-223ENST00000641597 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
PHGDH-223ENST00000641597 SEC61GP60059 68 aa9.89□□□□□ -0.83
PHGDH-223ENST00000641597 SPANXA2-OT1Q8N9U9 137 aa9.88□□□□□ -0.83
PHGDH-223ENST00000641597 A8MU10 97 aa9.87□□□□□ -0.83
PHGDH-223ENST00000641597 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
PHGDH-223ENST00000641597 Q5W150 140 aa9.85□□□□□ -0.83
PHGDH-223ENST00000641597 PKD1P98161 4303 aa9.85□□□□□ -0.83
PHGDH-223ENST00000641597 COA5Q86WW8 74 aa9.83□□□□□ -0.84
PHGDH-223ENST00000641597 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
PHGDH-223ENST00000641597 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
PHGDH-223ENST00000641597 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-223ENST00000641597 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
PHGDH-223ENST00000641597 KRTAP10-1P60331 282 aa9.78□□□□□ -0.84
PHGDH-223ENST00000641597 Q5VV11 94 aa9.78□□□□□ -0.84
PHGDH-223ENST00000641597 RETNLBQ9BQ08 111 aa9.77□□□□□ -0.84
PHGDH-223ENST00000641597 VPS13BQ7Z7G8 4022 aa9.77□□□□□ -0.85
PHGDH-223ENST00000641597 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
PHGDH-223ENST00000641597 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
PHGDH-223ENST00000641597 PKHD1P08F94 4074 aa9.72□□□□□ -0.85
PHGDH-223ENST00000641597 SPAG11AQ6PDA7 123 aa9.71□□□□□ -0.85
PHGDH-223ENST00000641597 HRES1P13985 223 aa9.71□□□□□ -0.86
PHGDH-223ENST00000641597 KRTAP13-3Q3SY46 172 aa9.7□□□□□ -0.86
PHGDH-223ENST00000641597 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
PHGDH-223ENST00000641597 SSBP3-AS1Q7Z2R9 100 aa9.67□□□□□ -0.86
PHGDH-223ENST00000641597 V9GYY9 64 aa9.67□□□□□ -0.86
PHGDH-223ENST00000641597 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
PHGDH-223ENST00000641597 Q6ZSA8 131 aa9.65□□□□□ -0.87
PHGDH-223ENST00000641597 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
PHGDH-223ENST00000641597 LIMD2Q9BT23 127 aa9.64□□□□□ -0.87
PHGDH-223ENST00000641597 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
PHGDH-223ENST00000641597 LINC00313P59037 77 aa9.62□□□□□ -0.87
PHGDH-223ENST00000641597 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
PHGDH-223ENST00000641597 KRTAP21-3Q3LHN1 58 aa9.58□□□□□ -0.88
PHGDH-223ENST00000641597 LCA10Q71F78 164 aa9.57□□□□□ -0.88
PHGDH-223ENST00000641597 A6NED7 52 aa9.55□□□□□ -0.88
PHGDH-223ENST00000641597 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
PHGDH-223ENST00000641597 KRTAP16-1A8MUX0 517 aa9.54□□□□□ -0.88
PHGDH-223ENST00000641597 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
PHGDH-223ENST00000641597 Q75L30 129 aa9.53□□□□□ -0.88
PHGDH-223ENST00000641597 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
PHGDH-223ENST00000641597 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
PHGDH-223ENST00000641597 SACSQ9NZJ4 4579 aa9.5□□□□□ -0.89
PHGDH-223ENST00000641597 SPINK7P58062 85 aa9.5□□□□□ -0.89
PHGDH-223ENST00000641597 FAT1Q14517 4588 aa9.49□□□□□ -0.89
PHGDH-223ENST00000641597 SMR3BP02814 79 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-223ENST00000641597 IGKV2D-30A0A075B6S6 120 aa9.47□□□□□ -0.89
PHGDH-223ENST00000641597 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
PHGDH-223ENST00000641597 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
PHGDH-223ENST00000641597 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.89
PHGDH-223ENST00000641597 PMAIP1Q13794 54 aa9.46□□□□□ -0.9
PHGDH-223ENST00000641597 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
PHGDH-223ENST00000641597 ACYP2P14621 99 aa9.43□□□□□ -0.9
PHGDH-223ENST00000641597 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
PHGDH-223ENST00000641597 C4orf48Q5BLP8 95 aa9.41□□□□□ -0.9
PHGDH-223ENST00000641597 CDC42SE1Q9NRR8 79 aa9.35□□□□□ -0.91
PHGDH-223ENST00000641597 SPINK1P00995 79 aa9.33□□□□□ -0.92
PHGDH-223ENST00000641597 LINC00304Q8N9R0 145 aa9.31□□□□□ -0.92
PHGDH-223ENST00000641597 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
PHGDH-223ENST00000641597 C9orf92A6NGG3 77 aa9.29□□□□□ -0.92
PHGDH-223ENST00000641597 Q8N1X5 172 aa9.29□□□□□ -0.92
PHGDH-223ENST00000641597 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
PHGDH-223ENST00000641597 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
PHGDH-223ENST00000641597 KMT2CQ8NEZ4 4911 aaKnown RBP9.27□□□□□ -0.93
PHGDH-223ENST00000641597 A6NN06 94 aa9.25□□□□□ -0.93
PHGDH-223ENST00000641597 A0A1B0GU69 56 aa9.23□□□□□ -0.93
PHGDH-223ENST00000641597 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-223ENST00000641597 RYR2Q92736 4967 aa9.18□□□□□ -0.94
PHGDH-223ENST00000641597 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
PHGDH-223ENST00000641597 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
PHGDH-223ENST00000641597 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
PHGDH-223ENST00000641597 KTN1-AS1Q86SY8 53 aa9.16□□□□□ -0.94
PHGDH-223ENST00000641597 FLG2Q5D862 2391 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-223ENST00000641597 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
PHGDH-223ENST00000641597 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
PHGDH-223ENST00000641597 A8MUU9 505 aa9.04□□□□□ -0.96
PHGDH-223ENST00000641597 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
PHGDH-223ENST00000641597 MIR22HGQ0VDD5 57 aa9.03□□□□□ -0.96
PHGDH-223ENST00000641597 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
PHGDH-223ENST00000641597 MYCBP2O75592 4640 aa9.03□□□□□ -0.96
PHGDH-223ENST00000641597 SPATA8Q6RVD6 105 aa9.03□□□□□ -0.96
PHGDH-223ENST00000641597 DMBT1Q9UGM3 2413 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-223ENST00000641597 UQCR11O14957 56 aa9.01□□□□□ -0.97
PHGDH-223ENST00000641597 PRAC1Q96KF2 57 aa9.01□□□□□ -0.97
PHGDH-223ENST00000641597 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
PHGDH-223ENST00000641597 HSPG2P98160 4391 aa8.98□□□□□ -0.97
PHGDH-223ENST00000641597 FAT3Q8TDW7 4589 aa8.97□□□□□ -0.97
PHGDH-223ENST00000641597 TNXBP22105 4242 aa8.94□□□□□ -0.98
PHGDH-223ENST00000641597 RYR3Q15413 4870 aa8.94□□□□□ -0.98
PHGDH-223ENST00000641597 KRTAP17-1Q9BYP8 105 aa8.89□□□□□ -0.99
PHGDH-223ENST00000641597 H3BS24 57 aa8.88□□□□□ -0.99
PHGDH-223ENST00000641597 H0YAA0 97 aa8.85□□□□□ -0.99
PHGDH-223ENST00000641597 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
PHGDH-223ENST00000641597 Q5VSD8 79 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms