RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
CASC19-243ENST00000641588 HIVEP2P31629 2446 aa4□□□□□ -1.77
CASC19-243ENST00000641588 USP9YO00507 2555 aaPredicted RBP3.99□□□□□ -1.77
CASC19-243ENST00000641588 APCP25054 2843 aa3.99□□□□□ -1.77
CASC19-243ENST00000641588 CRYBG3Q68DQ2 2970 aa3.99□□□□□ -1.77
CASC19-243ENST00000641588 C20orf166-AS1Q96NR2 134 aa3.99□□□□□ -1.77
CASC19-243ENST00000641588 ASH1LQ9NR48 2969 aaKnown RBP3.98□□□□□ -1.77
CASC19-243ENST00000641588 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
CASC19-243ENST00000641588 CASC10Q5T4H9 136 aa3.98□□□□□ -1.77
CASC19-243ENST00000641588 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
CASC19-243ENST00000641588 H0YAA0 97 aa3.96□□□□□ -1.78
CASC19-243ENST00000641588 Q6ZSA8 131 aa3.96□□□□□ -1.78
CASC19-243ENST00000641588 CELSR2Q9HCU4 2923 aa3.96□□□□□ -1.78
CASC19-243ENST00000641588 A0A1B0GU33 70 aa3.95□□□□□ -1.78
CASC19-243ENST00000641588 FLNBO75369 2602 aaKnown RBP3.95□□□□□ -1.78
CASC19-243ENST00000641588 HECTD1Q9ULT8 2610 aa3.94□□□□□ -1.78
CASC19-243ENST00000641588 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
CASC19-243ENST00000641588 F8P00451 2351 aa3.94□□□□□ -1.78
CASC19-243ENST00000641588 A0A087WTM6 91 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 KRTAP10-3P60369 221 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 SSBP3-AS1Q7Z2R9 100 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 ABCA12Q86UK0 2595 aa3.92□□□□□ -1.78
CASC19-243ENST00000641588 ITPR2Q14571 2701 aa3.92□□□□□ -1.78
CASC19-243ENST00000641588 BAHCC1Q9P281 2608 aa3.91□□□□□ -1.78
CASC19-243ENST00000641588 MXRA5Q9NR99 2828 aa3.91□□□□□ -1.78
CASC19-243ENST00000641588 FBN2P35556 2912 aa3.91□□□□□ -1.78
CASC19-243ENST00000641588 J3QKU1 62 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 COX6B2Q6YFQ2 88 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 PSORS1C2Q9UIG4 136 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 TENM2Q9NT68 2774 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 NOTCH2Q04721 2471 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
CASC19-243ENST00000641588 CSMD2Q7Z408 3487 aa3.9□□□□□ -1.79
CASC19-243ENST00000641588 POLQO75417 2590 aa3.9□□□□□ -1.79
CASC19-243ENST00000641588 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
CASC19-243ENST00000641588 NBEAL2Q6ZNJ1 2754 aa3.89□□□□□ -1.79
CASC19-243ENST00000641588 NAV2Q8IVL1 2488 aa3.88□□□□□ -1.79
CASC19-243ENST00000641588 NBPF19A0A087WUL8 3843 aa3.87□□□□□ -1.79
CASC19-243ENST00000641588 SONP18583 2426 aaKnown RBP3.87□□□□□ -1.79
CASC19-243ENST00000641588 TEX15Q9BXT5 2789 aa3.87□□□□□ -1.79
CASC19-243ENST00000641588 SVEP1Q4LDE5 3571 aa3.87□□□□□ -1.79
CASC19-243ENST00000641588 NF1P21359 2839 aa3.86□□□□□ -1.79
CASC19-243ENST00000641588 CCDC168Q8NDH2 2452 aa3.86□□□□□ -1.79
CASC19-243ENST00000641588 MTORP42345 2549 aa3.86□□□□□ -1.79
CASC19-243ENST00000641588 KRTAP10-9P60411 292 aa3.85□□□□□ -1.79
CASC19-243ENST00000641588 KRTAP10-11P60412 298 aa3.85□□□□□ -1.79
CASC19-243ENST00000641588 PDZD2O15018 2839 aa3.85□□□□□ -1.79
CASC19-243ENST00000641588 MAST4O15021 2626 aa3.84□□□□□ -1.79
CASC19-243ENST00000641588 SPINK1P00995 79 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 SPACA4Q8TDM5 124 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 VPS13CQ709C8 3753 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 ZANQ9Y493 2812 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
CASC19-243ENST00000641588 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
CASC19-243ENST00000641588 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
CASC19-243ENST00000641588 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
CASC19-243ENST00000641588 ITPR3Q14573 2671 aa3.81□□□□□ -1.8
CASC19-243ENST00000641588 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 AKAP9Q99996 3911 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 TPRXLQ17RH7 258 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 TYMSOSQ8TAI1 123 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 FLNAP21333 2647 aaKnown RBP3.79□□□□□ -1.8
CASC19-243ENST00000641588 SETD2Q9BYW2 2564 aaPredicted RBP3.79□□□□□ -1.8
CASC19-243ENST00000641588 ACANP16112 2415 aa3.78□□□□□ -1.8
CASC19-243ENST00000641588 ZNF469Q96JG9 3925 aaPredicted RBP3.78□□□□□ -1.8
CASC19-243ENST00000641588 HIVEP1P15822 2718 aa3.77□□□□□ -1.81
CASC19-243ENST00000641588 NBDYA0A0U1RRE5 68 aa3.77□□□□□ -1.81
CASC19-243ENST00000641588 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
CASC19-243ENST00000641588 KRTAP1-5Q9BYS1 174 aa3.76□□□□□ -1.81
CASC19-243ENST00000641588 NIPBLQ6KC79 2804 aaeCLIP3.75□□□□□ -1.81
CASC19-243ENST00000641588 TEP1Q99973 2627 aaKnown RBP3.74□□□□□ -1.81
CASC19-243ENST00000641588 UBE2DNLQ8IWF7 75 aa3.74□□□□□ -1.81
CASC19-243ENST00000641588 NSD1Q96L73 2696 aaPredicted RBP3.73□□□□□ -1.81
CASC19-243ENST00000641588 FLG2Q5D862 2391 aaPredicted RBP3.72□□□□□ -1.81
CASC19-243ENST00000641588 DNAH1Q9P2D7 4330 aa3.71□□□□□ -1.82
CASC19-243ENST00000641588 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
CASC19-243ENST00000641588 ANK3Q12955 4377 aaKnown RBP3.69□□□□□ -1.82
CASC19-243ENST00000641588 SRRM2Q9UQ35 2752 aaKnown RBP3.68□□□□□ -1.82
CASC19-243ENST00000641588 APLNQ9ULZ1 77 aa3.68□□□□□ -1.82
CASC19-243ENST00000641588 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
CASC19-243ENST00000641588 ATRQ13535 2644 aa3.66□□□□□ -1.82
CASC19-243ENST00000641588 CUBNO60494 3623 aa3.64□□□□□ -1.83
CASC19-243ENST00000641588 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
CASC19-243ENST00000641588 SMR3AQ99954 134 aa3.63□□□□□ -1.83
CASC19-243ENST00000641588 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
CASC19-243ENST00000641588 S4R3F8 94 aa3.62□□□□□ -1.83
CASC19-243ENST00000641588 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
CASC19-243ENST00000641588 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
CASC19-243ENST00000641588 COL6A5A8TX70 2615 aa3.61□□□□□ -1.83
CASC19-243ENST00000641588 TENM1Q9UKZ4 2725 aa3.6□□□□□ -1.83
CASC19-243ENST00000641588 FBN1P35555 2871 aaKnown RBP3.6□□□□□ -1.83
CASC19-243ENST00000641588 VWFP04275 2813 aa3.59□□□□□ -1.83
CASC19-243ENST00000641588 STAB1Q9NY15 2570 aa3.59□□□□□ -1.84
CASC19-243ENST00000641588 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
CASC19-243ENST00000641588 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
CASC19-243ENST00000641588 TENM3Q9P273 2699 aa3.57□□□□□ -1.84
CASC19-243ENST00000641588 A0A0D9SG42 100 aa3.57□□□□□ -1.84
CASC19-243ENST00000641588 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms