RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 Q96NJ1 140 aa7.25□□□□□ -1.25
PHGDH-220ENST00000641570 C9orf92A6NGG3 77 aa7.24□□□□□ -1.25
PHGDH-220ENST00000641570 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
PHGDH-220ENST00000641570 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
PHGDH-220ENST00000641570 A0A1B0GVX0 72 aa7.23□□□□□ -1.25
PHGDH-220ENST00000641570 LINC00313P59037 77 aa7.22□□□□□ -1.25
PHGDH-220ENST00000641570 CXCL6P80162 114 aa7.22□□□□□ -1.25
PHGDH-220ENST00000641570 LINC00643Q86TS7 51 aa7.21□□□□□ -1.26
PHGDH-220ENST00000641570 DSCR10P59022 87 aa7.19□□□□□ -1.26
PHGDH-220ENST00000641570 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
PHGDH-220ENST00000641570 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
PHGDH-220ENST00000641570 K7EQZ3 153 aa7.17□□□□□ -1.26
PHGDH-220ENST00000641570 HIST1H4AP62805 103 aaKnown RBP7.17□□□□□ -1.26
PHGDH-220ENST00000641570 KRTAP13-3Q3SY46 172 aa7.17□□□□□ -1.26
PHGDH-220ENST00000641570 HERC1Q15751 4861 aa7.16□□□□□ -1.26
PHGDH-220ENST00000641570 C8orf17Q9NRJ1 99 aa7.15□□□□□ -1.26
PHGDH-220ENST00000641570 Q8N9L7 120 aa7.14□□□□□ -1.27
PHGDH-220ENST00000641570 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
PHGDH-220ENST00000641570 NDUFS5O43920 106 aa7.12□□□□□ -1.27
PHGDH-220ENST00000641570 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
PHGDH-220ENST00000641570 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
PHGDH-220ENST00000641570 WFDC13Q8IUB5 93 aa7.11□□□□□ -1.27
PHGDH-220ENST00000641570 XP32Q5T750 250 aa7.1□□□□□ -1.27
PHGDH-220ENST00000641570 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
PHGDH-220ENST00000641570 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
PHGDH-220ENST00000641570 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
PHGDH-220ENST00000641570 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
PHGDH-220ENST00000641570 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
PHGDH-220ENST00000641570 Q75L30 129 aa7.06□□□□□ -1.28
PHGDH-220ENST00000641570 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
PHGDH-220ENST00000641570 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
PHGDH-220ENST00000641570 HMCN2Q8NDA2 5059 aa7.04□□□□□ -1.28
PHGDH-220ENST00000641570 C20orf166-AS1Q96NR2 134 aa7.03□□□□□ -1.28
PHGDH-220ENST00000641570 SCGB1A1P11684 91 aa7.02□□□□□ -1.29
PHGDH-220ENST00000641570 IMUPQ9GZP8 106 aa7.02□□□□□ -1.29
PHGDH-220ENST00000641570 A8MUU9 505 aa7.01□□□□□ -1.29
PHGDH-220ENST00000641570 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
PHGDH-220ENST00000641570 MT-ATP8P03928 68 aa7□□□□□ -1.29
PHGDH-220ENST00000641570 A0A087WVE0 104 aa6.99□□□□□ -1.29
PHGDH-220ENST00000641570 Q8N9P0 234 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-220ENST00000641570 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
PHGDH-220ENST00000641570 PCOTHQ58A44 107 aa6.97□□□□□ -1.29
PHGDH-220ENST00000641570 LPAP08519 4548 aa6.95□□□□□ -1.3
PHGDH-220ENST00000641570 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
PHGDH-220ENST00000641570 LRP2P98164 4655 aa6.92□□□□□ -1.3
PHGDH-220ENST00000641570 FAM236AA0A1B0GUQ0 79 aa6.91□□□□□ -1.3
PHGDH-220ENST00000641570 FAM236BA0A1B0GV22 79 aa6.91□□□□□ -1.3
PHGDH-220ENST00000641570 UQCRQO14949 82 aa6.89□□□□□ -1.31
PHGDH-220ENST00000641570 SMIM20Q8N5G0 67 aa6.89□□□□□ -1.31
PHGDH-220ENST00000641570 TRAV22A0A0B4J277 110 aa6.86□□□□□ -1.31
PHGDH-220ENST00000641570 ATOX1O00244 68 aa6.86□□□□□ -1.31
PHGDH-220ENST00000641570 MP68P56378 58 aa6.86□□□□□ -1.31
PHGDH-220ENST00000641570 IGKV2D-30A0A075B6S6 120 aa6.84□□□□□ -1.31
PHGDH-220ENST00000641570 A0A0U1RQV1 116 aa6.84□□□□□ -1.31
PHGDH-220ENST00000641570 IGKV2-30P06310 120 aa6.84□□□□□ -1.31
PHGDH-220ENST00000641570 C7orf65Q6ZTY9 151 aa6.83□□□□□ -1.32
PHGDH-220ENST00000641570 H0Y9P7 68 aa6.82□□□□□ -1.32
PHGDH-220ENST00000641570 Q5W150 140 aa6.8□□□□□ -1.32
PHGDH-220ENST00000641570 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
PHGDH-220ENST00000641570 SPINK7P58062 85 aa6.79□□□□□ -1.32
PHGDH-220ENST00000641570 C5orf47Q569G3 176 aa6.79□□□□□ -1.32
PHGDH-220ENST00000641570 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
PHGDH-220ENST00000641570 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
PHGDH-220ENST00000641570 RBM12B-AS1Q9P1G2 102 aa6.78□□□□□ -1.32
PHGDH-220ENST00000641570 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
PHGDH-220ENST00000641570 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
PHGDH-220ENST00000641570 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
PHGDH-220ENST00000641570 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
PHGDH-220ENST00000641570 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
PHGDH-220ENST00000641570 H3BPC8 53 aa6.75□□□□□ -1.33
PHGDH-220ENST00000641570 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
PHGDH-220ENST00000641570 LINC00208Q96KT6 92 aa6.74□□□□□ -1.33
PHGDH-220ENST00000641570 SERP2Q8N6R1 65 aa6.71□□□□□ -1.34
PHGDH-220ENST00000641570 ANAPC13Q9BS18 74 aa6.7□□□□□ -1.34
PHGDH-220ENST00000641570 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
PHGDH-220ENST00000641570 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
PHGDH-220ENST00000641570 LCE2BO14633 110 aa6.65□□□□□ -1.34
PHGDH-220ENST00000641570 RNF213Q63HN8 5207 aa6.65□□□□□ -1.34
PHGDH-220ENST00000641570 HRES1P13985 223 aa6.63□□□□□ -1.35
PHGDH-220ENST00000641570 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
PHGDH-220ENST00000641570 COX7CP15954 63 aa6.62□□□□□ -1.35
PHGDH-220ENST00000641570 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
PHGDH-220ENST00000641570 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
PHGDH-220ENST00000641570 MUC2Q02817 5179 aa6.57□□□□□ -1.36
PHGDH-220ENST00000641570 M0R2T5 61 aa6.54□□□□□ -1.36
PHGDH-220ENST00000641570 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
PHGDH-220ENST00000641570 MPLKIPQ8TAP9 179 aa6.54□□□□□ -1.36
PHGDH-220ENST00000641570 NDUFC1O43677 76 aa6.53□□□□□ -1.36
PHGDH-220ENST00000641570 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
PHGDH-220ENST00000641570 A8MUN3 132 aa6.52□□□□□ -1.37
PHGDH-220ENST00000641570 S4R3F8 94 aa6.47□□□□□ -1.37
PHGDH-220ENST00000641570 SPANXA2-OT1Q8N9U9 137 aa6.44□□□□□ -1.38
PHGDH-220ENST00000641570 CCDC179H3BU77 68 aa6.43□□□□□ -1.38
PHGDH-220ENST00000641570 ACYP2P14621 99 aa6.43□□□□□ -1.38
PHGDH-220ENST00000641570 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
PHGDH-220ENST00000641570 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
PHGDH-220ENST00000641570 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
PHGDH-220ENST00000641570 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.39
PHGDH-220ENST00000641570 MT1HP80294 61 aa6.39□□□□□ -1.39
PHGDH-220ENST00000641570 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms