RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SPINK1P00995 79 aa9.98□□□□□ -0.81
PHGDH-208ENST00000641023 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
PHGDH-208ENST00000641023 SNURFQ9Y675 71 aa9.97□□□□□ -0.81
PHGDH-208ENST00000641023 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
PHGDH-208ENST00000641023 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
PHGDH-208ENST00000641023 SPAG11AQ6PDA7 123 aa9.93□□□□□ -0.82
PHGDH-208ENST00000641023 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
PHGDH-208ENST00000641023 TMEM258P61165 79 aa9.92□□□□□ -0.82
PHGDH-208ENST00000641023 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
PHGDH-208ENST00000641023 NDUFC1O43677 76 aa9.91□□□□□ -0.82
PHGDH-208ENST00000641023 RPS29P62273 56 aaKnown RBP9.9□□□□□ -0.82
PHGDH-208ENST00000641023 H7BZZ5 65 aa9.89□□□□□ -0.83
PHGDH-208ENST00000641023 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
PHGDH-208ENST00000641023 C8orf87E5RJ46 101 aa9.88□□□□□ -0.83
PHGDH-208ENST00000641023 NOTCH2NLQ7Z3S9 236 aa9.88□□□□□ -0.83
PHGDH-208ENST00000641023 MP68P56378 58 aa9.87□□□□□ -0.83
PHGDH-208ENST00000641023 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
PHGDH-208ENST00000641023 Q5VSD8 79 aa9.86□□□□□ -0.83
PHGDH-208ENST00000641023 NDUFS5O43920 106 aa9.84□□□□□ -0.83
PHGDH-208ENST00000641023 LINC00313P59037 77 aa9.84□□□□□ -0.83
PHGDH-208ENST00000641023 HSPG2P98160 4391 aa9.83□□□□□ -0.84
PHGDH-208ENST00000641023 H0Y9P7 68 aa9.81□□□□□ -0.84
PHGDH-208ENST00000641023 H3BPC8 53 aa9.81□□□□□ -0.84
PHGDH-208ENST00000641023 RYR1P21817 5038 aa9.81□□□□□ -0.84
PHGDH-208ENST00000641023 TRAV22A0A0B4J277 110 aa9.8□□□□□ -0.84
PHGDH-208ENST00000641023 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
PHGDH-208ENST00000641023 LINC00208Q96KT6 92 aa9.79□□□□□ -0.84
PHGDH-208ENST00000641023 FAM236DA0A1B0GTK5 79 aa9.78□□□□□ -0.84
PHGDH-208ENST00000641023 FAM236CP0DP71 79 aa9.78□□□□□ -0.84
PHGDH-208ENST00000641023 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
PHGDH-208ENST00000641023 C1orf64Q8NEQ6 169 aa9.73□□□□□ -0.85
PHGDH-208ENST00000641023 RPS28P62857 69 aaKnown RBP9.72□□□□□ -0.85
PHGDH-208ENST00000641023 KIAA1109Q2LD37 5005 aa9.72□□□□□ -0.85
PHGDH-208ENST00000641023 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.85
PHGDH-208ENST00000641023 EPPK1P58107 5090 aaKnown RBP9.71□□□□□ -0.86
PHGDH-208ENST00000641023 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-208ENST00000641023 Q8N1X5 172 aa9.69□□□□□ -0.86
PHGDH-208ENST00000641023 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
PHGDH-208ENST00000641023 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
PHGDH-208ENST00000641023 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
PHGDH-208ENST00000641023 LRP1Q07954 4544 aaKnown RBP9.65□□□□□ -0.86
PHGDH-208ENST00000641023 Q5W150 140 aa9.63□□□□□ -0.87
PHGDH-208ENST00000641023 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
PHGDH-208ENST00000641023 SERP1Q9Y6X1 66 aa9.6□□□□□ -0.87
PHGDH-208ENST00000641023 TNXBP22105 4242 aa9.59□□□□□ -0.87
PHGDH-208ENST00000641023 LOC101927531A0A1B0GV80 90 aa9.59□□□□□ -0.87
PHGDH-208ENST00000641023 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
PHGDH-208ENST00000641023 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
PHGDH-208ENST00000641023 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-208ENST00000641023 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
PHGDH-208ENST00000641023 PCOTHQ58A44 107 aa9.55□□□□□ -0.88
PHGDH-208ENST00000641023 CYP4F30PQ9H0H9 118 aa9.54□□□□□ -0.88
PHGDH-208ENST00000641023 C9orf92A6NGG3 77 aa9.53□□□□□ -0.88
PHGDH-208ENST00000641023 PRR4Q16378 134 aa9.52□□□□□ -0.88
PHGDH-208ENST00000641023 OXTP01178 125 aa9.51□□□□□ -0.89
PHGDH-208ENST00000641023 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
PHGDH-208ENST00000641023 MYCBP2O75592 4640 aa9.47□□□□□ -0.89
PHGDH-208ENST00000641023 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-208ENST00000641023 MT1HL1P0DM35 61 aa9.46□□□□□ -0.89
PHGDH-208ENST00000641023 IGKV2-30P06310 120 aa9.46□□□□□ -0.9
PHGDH-208ENST00000641023 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
PHGDH-208ENST00000641023 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-208ENST00000641023 A8MUU9 505 aa9.44□□□□□ -0.9
PHGDH-208ENST00000641023 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.91
PHGDH-208ENST00000641023 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
PHGDH-208ENST00000641023 C4orf26Q17RF5 130 aa9.37□□□□□ -0.91
PHGDH-208ENST00000641023 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
PHGDH-208ENST00000641023 HRES1P13985 223 aa9.36□□□□□ -0.91
PHGDH-208ENST00000641023 Q75L30 129 aa9.35□□□□□ -0.91
PHGDH-208ENST00000641023 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
PHGDH-208ENST00000641023 COA5Q86WW8 74 aa9.29□□□□□ -0.92
PHGDH-208ENST00000641023 ACYP2P14621 99 aa9.25□□□□□ -0.93
PHGDH-208ENST00000641023 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
PHGDH-208ENST00000641023 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
PHGDH-208ENST00000641023 ATP11AUNQ6ZP68 121 aa9.25□□□□□ -0.93
PHGDH-208ENST00000641023 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
PHGDH-208ENST00000641023 XP32Q5T750 250 aa9.23□□□□□ -0.93
PHGDH-208ENST00000641023 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
PHGDH-208ENST00000641023 MPLKIPQ8TAP9 179 aa9.22□□□□□ -0.93
PHGDH-208ENST00000641023 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
PHGDH-208ENST00000641023 SPINK7P58062 85 aa9.2□□□□□ -0.94
PHGDH-208ENST00000641023 HERC2O95714 4834 aa9.17□□□□□ -0.94
PHGDH-208ENST00000641023 J3QL48 77 aa9.16□□□□□ -0.94
PHGDH-208ENST00000641023 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
PHGDH-208ENST00000641023 Q1T7F1 81 aa9.16□□□□□ -0.94
PHGDH-208ENST00000641023 V9GYY9 64 aa9.14□□□□□ -0.95
PHGDH-208ENST00000641023 CHKB-CPT1BH3BT56 60 aa9.12□□□□□ -0.95
PHGDH-208ENST00000641023 A8MUN3 132 aa9.12□□□□□ -0.95
PHGDH-208ENST00000641023 SEC61GP60059 68 aa9.03□□□□□ -0.96
PHGDH-208ENST00000641023 PSPHP1O15172 72 aa9□□□□□ -0.97
PHGDH-208ENST00000641023 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
PHGDH-208ENST00000641023 LRP2P98164 4655 aa8.99□□□□□ -0.97
PHGDH-208ENST00000641023 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
PHGDH-208ENST00000641023 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
PHGDH-208ENST00000641023 LPAP08519 4548 aa8.97□□□□□ -0.97
PHGDH-208ENST00000641023 PRR15LQ9BU68 103 aa8.95□□□□□ -0.98
PHGDH-208ENST00000641023 BRK1Q8WUW1 75 aa8.94□□□□□ -0.98
PHGDH-208ENST00000641023 Q5VV11 94 aa8.89□□□□□ -0.99
PHGDH-208ENST00000641023 SPTSSBQ8NFR3 76 aa8.89□□□□□ -0.99
PHGDH-208ENST00000641023 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms