RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-222ENST00000640769 CHD7Q9P2D1 2997 aa4.51□□□□□ -1.69
RTTN-222ENST00000640769 SPEGQ15772 3267 aa4.5□□□□□ -1.69
RTTN-222ENST00000640769 UTP20O75691 2785 aaKnown RBP4.49□□□□□ -1.69
RTTN-222ENST00000640769 KRTAP13-1Q8IUC0 172 aa4.49□□□□□ -1.69
RTTN-222ENST00000640769 DCHS1Q96JQ0 3298 aa4.49□□□□□ -1.69
RTTN-222ENST00000640769 IGSF10Q6WRI0 2623 aa4.49□□□□□ -1.69
RTTN-222ENST00000640769 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
RTTN-222ENST00000640769 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
RTTN-222ENST00000640769 ATMQ13315 3056 aa4.46□□□□□ -1.7
RTTN-222ENST00000640769 TEP1Q99973 2627 aaKnown RBP4.45□□□□□ -1.7
RTTN-222ENST00000640769 CHD9Q3L8U1 2897 aa4.45□□□□□ -1.7
RTTN-222ENST00000640769 CRYBG3Q68DQ2 2970 aa4.44□□□□□ -1.7
RTTN-222ENST00000640769 MYO15AQ9UKN7 3530 aa4.44□□□□□ -1.7
RTTN-222ENST00000640769 KMT2BQ9UMN6 2715 aaPredicted RBP4.42□□□□□ -1.7
RTTN-222ENST00000640769 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
RTTN-222ENST00000640769 XP32Q5T750 250 aa4.41□□□□□ -1.7
RTTN-222ENST00000640769 VCANP13611 3396 aa4.41□□□□□ -1.7
RTTN-222ENST00000640769 WDFY3Q8IZQ1 3526 aa4.41□□□□□ -1.7
RTTN-222ENST00000640769 MAP1AP78559 2803 aaPredicted RBP4.41□□□□□ -1.7
RTTN-222ENST00000640769 DMXL2Q8TDJ6 3036 aa4.4□□□□□ -1.7
RTTN-222ENST00000640769 LAMA1P25391 3075 aa4.4□□□□□ -1.7
RTTN-222ENST00000640769 ITPR2Q14571 2701 aa4.38□□□□□ -1.71
RTTN-222ENST00000640769 ASPMQ8IZT6 3477 aa4.37□□□□□ -1.71
RTTN-222ENST00000640769 FRYLO94915 3013 aa4.36□□□□□ -1.71
RTTN-222ENST00000640769 LOC400499M0QZD8 3231 aa4.36□□□□□ -1.71
RTTN-222ENST00000640769 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
RTTN-222ENST00000640769 KRTAP13-4Q3LI77 160 aa4.34□□□□□ -1.72
RTTN-222ENST00000640769 DMXL1Q9Y485 3027 aa4.34□□□□□ -1.72
RTTN-222ENST00000640769 SETXQ7Z333 2677 aaKnown RBP4.33□□□□□ -1.72
RTTN-222ENST00000640769 FLNBO75369 2602 aaKnown RBP4.33□□□□□ -1.72
RTTN-222ENST00000640769 BOD1L1Q8NFC6 3051 aa4.33□□□□□ -1.72
RTTN-222ENST00000640769 ZFHX3Q15911 3703 aa4.33□□□□□ -1.72
RTTN-222ENST00000640769 ZZEF1O43149 2961 aa4.33□□□□□ -1.72
RTTN-222ENST00000640769 ZFHX4Q86UP3 3567 aa4.33□□□□□ -1.72
RTTN-222ENST00000640769 INE1O15225 51 aa4.32□□□□□ -1.72
RTTN-222ENST00000640769 USP34Q70CQ2 3546 aa4.32□□□□□ -1.72
RTTN-222ENST00000640769 ZNF292O60281 2723 aa4.3□□□□□ -1.72
RTTN-222ENST00000640769 CSMD1Q96PZ7 3565 aa4.29□□□□□ -1.72
RTTN-222ENST00000640769 TGP01266 2768 aa4.29□□□□□ -1.72
RTTN-222ENST00000640769 LAMA5O15230 3695 aa4.28□□□□□ -1.72
RTTN-222ENST00000640769 HIVEP1P15822 2718 aa4.28□□□□□ -1.72
RTTN-222ENST00000640769 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
RTTN-222ENST00000640769 TNRC18O15417 2968 aaPredicted RBP4.27□□□□□ -1.73
RTTN-222ENST00000640769 NBEAQ8NFP9 2946 aa4.27□□□□□ -1.73
RTTN-222ENST00000640769 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
RTTN-222ENST00000640769 TACC2O95359 2948 aa4.26□□□□□ -1.73
RTTN-222ENST00000640769 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
RTTN-222ENST00000640769 CELSR1Q9NYQ6 3014 aa4.23□□□□□ -1.73
RTTN-222ENST00000640769 SRRM2Q9UQ35 2752 aaKnown RBP4.23□□□□□ -1.73
RTTN-222ENST00000640769 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
RTTN-222ENST00000640769 RELNP78509 3460 aa4.22□□□□□ -1.73
RTTN-222ENST00000640769 EYSQ5T1H1 3165 aa4.16□□□□□ -1.74
RTTN-222ENST00000640769 DMDP11532 3685 aa4.16□□□□□ -1.74
RTTN-222ENST00000640769 SMG1Q96Q15 3661 aaKnown RBP4.15□□□□□ -1.75
RTTN-222ENST00000640769 TENM3Q9P273 2699 aa4.14□□□□□ -1.75
RTTN-222ENST00000640769 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
RTTN-222ENST00000640769 CELSR2Q9HCU4 2923 aa4.12□□□□□ -1.75
RTTN-222ENST00000640769 SPENQ96T58 3664 aaKnown RBP4.11□□□□□ -1.75
RTTN-222ENST00000640769 NBPF19A0A087WUL8 3843 aa4.1□□□□□ -1.75
RTTN-222ENST00000640769 NF1P21359 2839 aa4.06□□□□□ -1.76
RTTN-222ENST00000640769 TENM1Q9UKZ4 2725 aa4.06□□□□□ -1.76
RTTN-222ENST00000640769 DCHS2Q6V1P9 2916 aa4.05□□□□□ -1.76
RTTN-222ENST00000640769 PDZD2O15018 2839 aa4.05□□□□□ -1.76
RTTN-222ENST00000640769 NIPBLQ6KC79 2804 aaeCLIP4.01□□□□□ -1.77
RTTN-222ENST00000640769 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
RTTN-222ENST00000640769 CUBNO60494 3623 aa3.95□□□□□ -1.78
RTTN-222ENST00000640769 TENM4Q6N022 2769 aa3.95□□□□□ -1.78
RTTN-222ENST00000640769 ZANQ9Y493 2812 aa3.95□□□□□ -1.78
RTTN-222ENST00000640769 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
RTTN-222ENST00000640769 FLNCQ14315 2725 aa3.93□□□□□ -1.78
RTTN-222ENST00000640769 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
RTTN-222ENST00000640769 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
RTTN-222ENST00000640769 FBN2P35556 2912 aa3.92□□□□□ -1.78
RTTN-222ENST00000640769 SVEP1Q4LDE5 3571 aa3.9□□□□□ -1.79
RTTN-222ENST00000640769 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
RTTN-222ENST00000640769 MXRA5Q9NR99 2828 aa3.85□□□□□ -1.79
RTTN-222ENST00000640769 VWFP04275 2813 aa3.85□□□□□ -1.79
RTTN-222ENST00000640769 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.79
RTTN-222ENST00000640769 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
RTTN-222ENST00000640769 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
RTTN-222ENST00000640769 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
RTTN-222ENST00000640769 OTOGQ6ZRI0 2925 aa3.81□□□□□ -1.8
RTTN-222ENST00000640769 VPS13CQ709C8 3753 aa3.81□□□□□ -1.8
RTTN-222ENST00000640769 KRTAP21-3Q3LHN1 58 aa3.78□□□□□ -1.8
RTTN-222ENST00000640769 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
RTTN-222ENST00000640769 COL7A1Q02388 2944 aa3.77□□□□□ -1.81
RTTN-222ENST00000640769 MEGF8Q7Z7M0 2845 aa3.77□□□□□ -1.81
RTTN-222ENST00000640769 HRNRQ86YZ3 2850 aaPredicted RBP3.75□□□□□ -1.81
RTTN-222ENST00000640769 PKD1L1Q8TDX9 2849 aa3.75□□□□□ -1.81
RTTN-222ENST00000640769 MUC3AQ02505 3323 aa3.74□□□□□ -1.81
RTTN-222ENST00000640769 KRTAP3-2Q9BYR7 98 aa3.73□□□□□ -1.81
RTTN-222ENST00000640769 KRTAP3-3Q9BYR6 98 aa3.7□□□□□ -1.82
RTTN-222ENST00000640769 CSMD2Q7Z408 3487 aa3.7□□□□□ -1.82
RTTN-222ENST00000640769 AKAP9Q99996 3911 aa3.7□□□□□ -1.82
RTTN-222ENST00000640769 FBN3Q75N90 2809 aa3.61□□□□□ -1.83
RTTN-222ENST00000640769 FBN1P35555 2871 aaKnown RBP3.6□□□□□ -1.83
RTTN-222ENST00000640769 TRRAPQ9Y4A5 3859 aa3.59□□□□□ -1.83
RTTN-222ENST00000640769 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
RTTN-222ENST00000640769 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
RTTN-222ENST00000640769 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms