RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
PAX6-277ENST00000640735 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
PAX6-277ENST00000640735 RTL8CO15255 209 aa9.15□□□□□ -0.94
PAX6-277ENST00000640735 PRR4Q16378 134 aa9.15□□□□□ -0.94
PAX6-277ENST00000640735 CASC2Q6XLA1 102 aa9.15□□□□□ -0.94
PAX6-277ENST00000640735 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
PAX6-277ENST00000640735 LCE2BO14633 110 aa9.13□□□□□ -0.95
PAX6-277ENST00000640735 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
PAX6-277ENST00000640735 hDV103S1A0JD37 113 aa9.12□□□□□ -0.95
PAX6-277ENST00000640735 H3BPC8 53 aa9.12□□□□□ -0.95
PAX6-277ENST00000640735 NDUFB1O75438 58 aa9.12□□□□□ -0.95
PAX6-277ENST00000640735 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
PAX6-277ENST00000640735 DNAH17Q9UFH2 4485 aa9.12□□□□□ -0.95
PAX6-277ENST00000640735 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
PAX6-277ENST00000640735 Q96NJ1 140 aa9.11□□□□□ -0.95
PAX6-277ENST00000640735 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
PAX6-277ENST00000640735 MMP24-AS1A0A0U1RRL7 71 aa9.09□□□□□ -0.95
PAX6-277ENST00000640735 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
PAX6-277ENST00000640735 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
PAX6-277ENST00000640735 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
PAX6-277ENST00000640735 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
PAX6-277ENST00000640735 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
PAX6-277ENST00000640735 HECTD4Q9Y4D8 3996 aa9.07□□□□□ -0.96
PAX6-277ENST00000640735 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
PAX6-277ENST00000640735 H0Y9P7 68 aa9.06□□□□□ -0.96
PAX6-277ENST00000640735 ZNF861PO60384 105 aa9.06□□□□□ -0.96
PAX6-277ENST00000640735 LINC00208Q96KT6 92 aa9.05□□□□□ -0.96
PAX6-277ENST00000640735 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
PAX6-277ENST00000640735 SPANXA2-OT1Q8N9U9 137 aa9.04□□□□□ -0.96
PAX6-277ENST00000640735 MOBPQ13875 183 aa9.03□□□□□ -0.96
PAX6-277ENST00000640735 DNAH11Q96DT5 4516 aa9□□□□□ -0.97
PAX6-277ENST00000640735 PKD1P98161 4303 aa9□□□□□ -0.97
PAX6-277ENST00000640735 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
PAX6-277ENST00000640735 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
PAX6-277ENST00000640735 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
PAX6-277ENST00000640735 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
PAX6-277ENST00000640735 Q1T7F1 81 aa8.98□□□□□ -0.97
PAX6-277ENST00000640735 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
PAX6-277ENST00000640735 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
PAX6-277ENST00000640735 IGLV7-43P04211 117 aa8.95□□□□□ -0.98
PAX6-277ENST00000640735 ANAPC11Q9NYG5 84 aa8.95□□□□□ -0.98
PAX6-277ENST00000640735 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
PAX6-277ENST00000640735 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
PAX6-277ENST00000640735 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
PAX6-277ENST00000640735 EPPK1P58107 5090 aaKnown RBP8.88□□□□□ -0.99
PAX6-277ENST00000640735 C7orf65Q6ZTY9 151 aa8.88□□□□□ -0.99
PAX6-277ENST00000640735 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
PAX6-277ENST00000640735 PKHD1P08F94 4074 aa8.87□□□□□ -0.99
PAX6-277ENST00000640735 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
PAX6-277ENST00000640735 A0A087X002 238 aa8.84□□□□□ -0.99
PAX6-277ENST00000640735 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
PAX6-277ENST00000640735 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
PAX6-277ENST00000640735 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
PAX6-277ENST00000640735 LUZP6Q538Z0 58 aa8.81□□□□□ -1
PAX6-277ENST00000640735 Q6ZSA8 131 aa8.8□□□□□ -1
PAX6-277ENST00000640735 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
PAX6-277ENST00000640735 LRP1BQ9NZR2 4599 aa8.79□□□□□ -1
PAX6-277ENST00000640735 KRTAP13-3Q3SY46 172 aa8.78□□□□□ -1
PAX6-277ENST00000640735 PCOTHQ58A44 107 aa8.77□□□□□ -1
PAX6-277ENST00000640735 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1
PAX6-277ENST00000640735 COA5Q86WW8 74 aa8.77□□□□□ -1.01
PAX6-277ENST00000640735 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
PAX6-277ENST00000640735 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
PAX6-277ENST00000640735 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
PAX6-277ENST00000640735 CAMK2N1Q7Z7J9 78 aa8.73□□□□□ -1.01
PAX6-277ENST00000640735 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
PAX6-277ENST00000640735 BIRC6Q9NR09 4857 aa8.72□□□□□ -1.01
PAX6-277ENST00000640735 APOBP04114 4563 aaKnown RBP8.72□□□□□ -1.01
PAX6-277ENST00000640735 Q5VV11 94 aa8.71□□□□□ -1.01
PAX6-277ENST00000640735 Q5W150 140 aa8.71□□□□□ -1.01
PAX6-277ENST00000640735 A6NED7 52 aa8.68□□□□□ -1.02
PAX6-277ENST00000640735 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
PAX6-277ENST00000640735 HRES1P13985 223 aa8.66□□□□□ -1.02
PAX6-277ENST00000640735 K7ERS5 55 aa8.65□□□□□ -1.02
PAX6-277ENST00000640735 RYR1P21817 5038 aa8.65□□□□□ -1.02
PAX6-277ENST00000640735 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
PAX6-277ENST00000640735 PRR15LQ9BU68 103 aa8.62□□□□□ -1.03
PAX6-277ENST00000640735 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
PAX6-277ENST00000640735 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
PAX6-277ENST00000640735 HSPG2P98160 4391 aa8.61□□□□□ -1.03
PAX6-277ENST00000640735 Q8N1X5 172 aa8.6□□□□□ -1.03
PAX6-277ENST00000640735 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
PAX6-277ENST00000640735 A6NN06 94 aa8.57□□□□□ -1.04
PAX6-277ENST00000640735 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
PAX6-277ENST00000640735 ATP11AUNQ6ZP68 121 aa8.55□□□□□ -1.04
PAX6-277ENST00000640735 ACYP2P14621 99 aa8.53□□□□□ -1.04
PAX6-277ENST00000640735 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
PAX6-277ENST00000640735 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
PAX6-277ENST00000640735 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
PAX6-277ENST00000640735 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
PAX6-277ENST00000640735 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
PAX6-277ENST00000640735 VPS13BQ7Z7G8 4022 aa8.52□□□□□ -1.05
PAX6-277ENST00000640735 HERC2O95714 4834 aa8.52□□□□□ -1.05
PAX6-277ENST00000640735 FAT1Q14517 4588 aa8.51□□□□□ -1.05
PAX6-277ENST00000640735 SPINK1P00995 79 aa8.51□□□□□ -1.05
PAX6-277ENST00000640735 Q5VSD8 79 aa8.51□□□□□ -1.05
PAX6-277ENST00000640735 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
PAX6-277ENST00000640735 A8MU10 97 aa8.48□□□□□ -1.05
PAX6-277ENST00000640735 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
PAX6-277ENST00000640735 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms