RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ZFHX4Q86UP3 3567 aa5.01□□□□□ -1.61
NECAP1-227ENST00000640648 SMG1Q96Q15 3661 aaKnown RBP5.01□□□□□ -1.61
NECAP1-227ENST00000640648 KRTAP4-16G5E9R7 235 aaPredicted RBP5.01□□□□□ -1.61
NECAP1-227ENST00000640648 KMT2BQ9UMN6 2715 aaPredicted RBP5.01□□□□□ -1.61
NECAP1-227ENST00000640648 FBN2P35556 2912 aa5□□□□□ -1.61
NECAP1-227ENST00000640648 PANO1I0J062 215 aa5□□□□□ -1.61
NECAP1-227ENST00000640648 A8MU10 97 aa4.99□□□□□ -1.61
NECAP1-227ENST00000640648 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
NECAP1-227ENST00000640648 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
NECAP1-227ENST00000640648 DCHS2Q6V1P9 2916 aa4.99□□□□□ -1.61
NECAP1-227ENST00000640648 HRNRQ86YZ3 2850 aaPredicted RBP4.97□□□□□ -1.61
NECAP1-227ENST00000640648 NIPBLQ6KC79 2804 aaeCLIP4.97□□□□□ -1.61
NECAP1-227ENST00000640648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.95□□□□□ -1.62
NECAP1-227ENST00000640648 CRYBG3Q68DQ2 2970 aa4.95□□□□□ -1.62
NECAP1-227ENST00000640648 A8MUU9 505 aa4.95□□□□□ -1.62
NECAP1-227ENST00000640648 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
NECAP1-227ENST00000640648 Q8N1X5 172 aa4.94□□□□□ -1.62
NECAP1-227ENST00000640648 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
NECAP1-227ENST00000640648 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
NECAP1-227ENST00000640648 RELNP78509 3460 aa4.93□□□□□ -1.62
NECAP1-227ENST00000640648 SMR3BP02814 79 aaPredicted RBP4.93□□□□□ -1.62
NECAP1-227ENST00000640648 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
NECAP1-227ENST00000640648 LINC00304Q8N9R0 145 aa4.91□□□□□ -1.62
NECAP1-227ENST00000640648 KRTAP1-5Q9BYS1 174 aa4.91□□□□□ -1.62
NECAP1-227ENST00000640648 WWC2-AS2Q96NR7 200 aa4.9□□□□□ -1.62
NECAP1-227ENST00000640648 A0A0D9SG42 100 aa4.88□□□□□ -1.63
NECAP1-227ENST00000640648 TENM4Q6N022 2769 aa4.87□□□□□ -1.63
NECAP1-227ENST00000640648 MXRA5Q9NR99 2828 aa4.85□□□□□ -1.63
NECAP1-227ENST00000640648 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
NECAP1-227ENST00000640648 J3QL48 77 aa4.81□□□□□ -1.64
NECAP1-227ENST00000640648 BSNQ9UPA5 3926 aa4.8□□□□□ -1.64
NECAP1-227ENST00000640648 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
NECAP1-227ENST00000640648 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
NECAP1-227ENST00000640648 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
NECAP1-227ENST00000640648 SPENQ96T58 3664 aaKnown RBP4.77□□□□□ -1.65
NECAP1-227ENST00000640648 S4R3F8 94 aa4.76□□□□□ -1.65
NECAP1-227ENST00000640648 M0QZ58 72 aa4.75□□□□□ -1.65
NECAP1-227ENST00000640648 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
NECAP1-227ENST00000640648 RPS29P62273 56 aaKnown RBP4.73□□□□□ -1.65
NECAP1-227ENST00000640648 CUBNO60494 3623 aa4.71□□□□□ -1.65
NECAP1-227ENST00000640648 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.66
NECAP1-227ENST00000640648 P0C880 135 aa4.69□□□□□ -1.66
NECAP1-227ENST00000640648 Q6ZSA8 131 aa4.69□□□□□ -1.66
NECAP1-227ENST00000640648 TENM3Q9P273 2699 aa4.69□□□□□ -1.66
NECAP1-227ENST00000640648 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
NECAP1-227ENST00000640648 SVEP1Q4LDE5 3571 aa4.67□□□□□ -1.66
NECAP1-227ENST00000640648 KRTAP10-1P60331 282 aa4.66□□□□□ -1.66
NECAP1-227ENST00000640648 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.66
NECAP1-227ENST00000640648 H0YAA0 97 aa4.64□□□□□ -1.67
NECAP1-227ENST00000640648 KRTAP13-1Q8IUC0 172 aa4.64□□□□□ -1.67
NECAP1-227ENST00000640648 PDZD2O15018 2839 aa4.63□□□□□ -1.67
NECAP1-227ENST00000640648 KRTAP21-3Q3LHN1 58 aa4.62□□□□□ -1.67
NECAP1-227ENST00000640648 TENM1Q9UKZ4 2725 aa4.61□□□□□ -1.67
NECAP1-227ENST00000640648 R4GN34 69 aa4.61□□□□□ -1.67
NECAP1-227ENST00000640648 OTOGQ6ZRI0 2925 aa4.61□□□□□ -1.67
NECAP1-227ENST00000640648 FBN1P35555 2871 aaKnown RBP4.6□□□□□ -1.67
NECAP1-227ENST00000640648 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
NECAP1-227ENST00000640648 VWFP04275 2813 aa4.59□□□□□ -1.67
NECAP1-227ENST00000640648 ZFHX3Q15911 3703 aa4.59□□□□□ -1.67
NECAP1-227ENST00000640648 PKD1L1Q8TDX9 2849 aa4.59□□□□□ -1.67
NECAP1-227ENST00000640648 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
NECAP1-227ENST00000640648 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
NECAP1-227ENST00000640648 TGP01266 2768 aa4.51□□□□□ -1.69
NECAP1-227ENST00000640648 VPS13CQ709C8 3753 aa4.49□□□□□ -1.69
NECAP1-227ENST00000640648 INE1O15225 51 aa4.48□□□□□ -1.69
NECAP1-227ENST00000640648 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
NECAP1-227ENST00000640648 AKAP9Q99996 3911 aa4.46□□□□□ -1.7
NECAP1-227ENST00000640648 Q5VSD8 79 aa4.46□□□□□ -1.7
NECAP1-227ENST00000640648 TENM2Q9NT68 2774 aa4.46□□□□□ -1.7
NECAP1-227ENST00000640648 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
NECAP1-227ENST00000640648 TNP1P09430 55 aa4.42□□□□□ -1.7
NECAP1-227ENST00000640648 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
NECAP1-227ENST00000640648 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
NECAP1-227ENST00000640648 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.71
NECAP1-227ENST00000640648 M0R2T5 61 aa4.38□□□□□ -1.71
NECAP1-227ENST00000640648 TPRXLQ17RH7 258 aa4.36□□□□□ -1.71
NECAP1-227ENST00000640648 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
NECAP1-227ENST00000640648 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
NECAP1-227ENST00000640648 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
NECAP1-227ENST00000640648 TRRAPQ9Y4A5 3859 aa4.29□□□□□ -1.72
NECAP1-227ENST00000640648 XP32Q5T750 250 aa4.24□□□□□ -1.73
NECAP1-227ENST00000640648 COL7A1Q02388 2944 aa4.23□□□□□ -1.73
NECAP1-227ENST00000640648 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
NECAP1-227ENST00000640648 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
NECAP1-227ENST00000640648 KRTAP10-8P60410 259 aa4.2□□□□□ -1.74
NECAP1-227ENST00000640648 DNHD1Q96M86 4753 aa4.2□□□□□ -1.74
NECAP1-227ENST00000640648 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
NECAP1-227ENST00000640648 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
NECAP1-227ENST00000640648 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
NECAP1-227ENST00000640648 ANK2Q01484 3957 aa4.08□□□□□ -1.76
NECAP1-227ENST00000640648 CSMD3Q7Z407 3707 aa4.07□□□□□ -1.76
NECAP1-227ENST00000640648 KRTAP10-6P60371 365 aaPredicted RBP4.06□□□□□ -1.76
NECAP1-227ENST00000640648 A0A1B0GVY2 172 aa4.02□□□□□ -1.77
NECAP1-227ENST00000640648 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
NECAP1-227ENST00000640648 PRKDCP78527 4128 aaKnown RBP3.95□□□□□ -1.78
NECAP1-227ENST00000640648 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
NECAP1-227ENST00000640648 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
NECAP1-227ENST00000640648 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
NECAP1-227ENST00000640648 DNAH9Q9NYC9 4486 aa3.88□□□□□ -1.79
NECAP1-227ENST00000640648 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms