RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.01
SCARB2-221ENST00000640341 LY6G6CO95867 125 aa8.71□□□□□ -1.01
SCARB2-221ENST00000640341 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
SCARB2-221ENST00000640341 Q5VV11 94 aa8.7□□□□□ -1.02
SCARB2-221ENST00000640341 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
SCARB2-221ENST00000640341 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
SCARB2-221ENST00000640341 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
SCARB2-221ENST00000640341 LINC00483Q53H64 154 aa8.67□□□□□ -1.02
SCARB2-221ENST00000640341 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
SCARB2-221ENST00000640341 A6NED7 52 aa8.66□□□□□ -1.02
SCARB2-221ENST00000640341 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
SCARB2-221ENST00000640341 DNAH2Q9P225 4427 aa8.65□□□□□ -1.02
SCARB2-221ENST00000640341 HECTD4Q9Y4D8 3996 aa8.64□□□□□ -1.03
SCARB2-221ENST00000640341 LIMD2Q9BT23 127 aa8.64□□□□□ -1.03
SCARB2-221ENST00000640341 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
SCARB2-221ENST00000640341 DNAH17Q9UFH2 4485 aa8.63□□□□□ -1.03
SCARB2-221ENST00000640341 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
SCARB2-221ENST00000640341 DYNC2H1Q8NCM8 4307 aaKnown RBP8.62□□□□□ -1.03
SCARB2-221ENST00000640341 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
SCARB2-221ENST00000640341 Q5W150 140 aa8.61□□□□□ -1.03
SCARB2-221ENST00000640341 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
SCARB2-221ENST00000640341 Q6ZR54 194 aa8.59□□□□□ -1.03
SCARB2-221ENST00000640341 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
SCARB2-221ENST00000640341 HRES1P13985 223 aa8.58□□□□□ -1.04
SCARB2-221ENST00000640341 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
SCARB2-221ENST00000640341 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
SCARB2-221ENST00000640341 LCA10Q71F78 164 aa8.52□□□□□ -1.04
SCARB2-221ENST00000640341 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.05
SCARB2-221ENST00000640341 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
SCARB2-221ENST00000640341 LINC00313P59037 77 aa8.49□□□□□ -1.05
SCARB2-221ENST00000640341 Q75L30 129 aa8.48□□□□□ -1.05
SCARB2-221ENST00000640341 SPINK7P58062 85 aa8.47□□□□□ -1.05
SCARB2-221ENST00000640341 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
SCARB2-221ENST00000640341 KTN1-AS1Q86SY8 53 aa8.44□□□□□ -1.06
SCARB2-221ENST00000640341 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
SCARB2-221ENST00000640341 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
SCARB2-221ENST00000640341 IGKV2-30P06310 120 aa8.43□□□□□ -1.06
SCARB2-221ENST00000640341 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
SCARB2-221ENST00000640341 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
SCARB2-221ENST00000640341 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
SCARB2-221ENST00000640341 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
SCARB2-221ENST00000640341 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
SCARB2-221ENST00000640341 ACYP2P14621 99 aa8.41□□□□□ -1.06
SCARB2-221ENST00000640341 RBM12B-AS1Q9P1G2 102 aa8.39□□□□□ -1.07
SCARB2-221ENST00000640341 DNAH5Q8TE73 4624 aa8.39□□□□□ -1.07
SCARB2-221ENST00000640341 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
SCARB2-221ENST00000640341 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
SCARB2-221ENST00000640341 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
SCARB2-221ENST00000640341 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
SCARB2-221ENST00000640341 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
SCARB2-221ENST00000640341 HYDINQ4G0P3 5121 aa8.36□□□□□ -1.07
SCARB2-221ENST00000640341 PLA2G1BP04054 148 aaKnown RBP8.35□□□□□ -1.07
SCARB2-221ENST00000640341 SPINK1P00995 79 aa8.32□□□□□ -1.08
SCARB2-221ENST00000640341 A6NN06 94 aa8.3□□□□□ -1.08
SCARB2-221ENST00000640341 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
SCARB2-221ENST00000640341 A0A1B0GU69 56 aa8.29□□□□□ -1.08
SCARB2-221ENST00000640341 VPS13BQ7Z7G8 4022 aa8.29□□□□□ -1.08
SCARB2-221ENST00000640341 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
SCARB2-221ENST00000640341 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
SCARB2-221ENST00000640341 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-221ENST00000640341 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
SCARB2-221ENST00000640341 Q8N1X5 172 aa8.24□□□□□ -1.09
SCARB2-221ENST00000640341 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
SCARB2-221ENST00000640341 FAT2Q9NYQ8 4349 aa8.22□□□□□ -1.09
SCARB2-221ENST00000640341 Q6ZSA8 131 aa8.21□□□□□ -1.09
SCARB2-221ENST00000640341 PRAC1Q96KF2 57 aa8.21□□□□□ -1.09
SCARB2-221ENST00000640341 PKHD1P08F94 4074 aa8.19□□□□□ -1.1
SCARB2-221ENST00000640341 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
SCARB2-221ENST00000640341 PKD1P98161 4303 aa8.15□□□□□ -1.1
SCARB2-221ENST00000640341 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
SCARB2-221ENST00000640341 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
SCARB2-221ENST00000640341 MIR22HGQ0VDD5 57 aa8.11□□□□□ -1.11
SCARB2-221ENST00000640341 FAT1Q14517 4588 aa8.1□□□□□ -1.11
SCARB2-221ENST00000640341 UQCR11O14957 56 aa8.09□□□□□ -1.11
SCARB2-221ENST00000640341 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
SCARB2-221ENST00000640341 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
SCARB2-221ENST00000640341 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
SCARB2-221ENST00000640341 DYNC1H1Q14204 4646 aaKnown RBP7.96□□□□□ -1.14
SCARB2-221ENST00000640341 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
SCARB2-221ENST00000640341 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
SCARB2-221ENST00000640341 SACSQ9NZJ4 4579 aa7.93□□□□□ -1.14
SCARB2-221ENST00000640341 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
SCARB2-221ENST00000640341 CSAG1Q6PB30 78 aa7.89□□□□□ -1.15
SCARB2-221ENST00000640341 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
SCARB2-221ENST00000640341 A8MUU9 505 aa7.82□□□□□ -1.16
SCARB2-221ENST00000640341 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
SCARB2-221ENST00000640341 RPS29P62273 56 aaKnown RBP7.81□□□□□ -1.16
SCARB2-221ENST00000640341 H0YAA0 97 aa7.8□□□□□ -1.16
SCARB2-221ENST00000640341 A0A1B0GU33 70 aa7.8□□□□□ -1.16
SCARB2-221ENST00000640341 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
SCARB2-221ENST00000640341 MYCBP2O75592 4640 aa7.79□□□□□ -1.16
SCARB2-221ENST00000640341 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.17
SCARB2-221ENST00000640341 KRTAP10-4P60372 401 aaPredicted RBP7.73□□□□□ -1.17
SCARB2-221ENST00000640341 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
SCARB2-221ENST00000640341 A0A1B0GVY2 172 aa7.71□□□□□ -1.17
SCARB2-221ENST00000640341 H3BS24 57 aa7.71□□□□□ -1.17
SCARB2-221ENST00000640341 H1FX-AS1Q4G0G2 97 aa7.7□□□□□ -1.18
SCARB2-221ENST00000640341 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
SCARB2-221ENST00000640341 RYR3Q15413 4870 aa7.67□□□□□ -1.18
SCARB2-221ENST00000640341 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms