RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 KRTAP13-1Q8IUC0 172 aa4.84□□□□□ -1.63
SCARB2-220ENST00000640076 Q9BRP9 147 aa4.84□□□□□ -1.63
SCARB2-220ENST00000640076 SMR3BP02814 79 aaPredicted RBP4.84□□□□□ -1.64
SCARB2-220ENST00000640076 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.64
SCARB2-220ENST00000640076 A6NED7 52 aa4.83□□□□□ -1.64
SCARB2-220ENST00000640076 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
SCARB2-220ENST00000640076 SLC25A20O43772 301 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 IGLV7-43P04211 117 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 ATXN8Q156A1 80 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 SMCR5Q8TEV8 140 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 CYSTM1Q9H1C7 97 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 K7ERS5 55 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 ERC2-IT1O76042 136 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 HIGD2AQ9BW72 106 aa4.82□□□□□ -1.64
SCARB2-220ENST00000640076 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
SCARB2-220ENST00000640076 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
SCARB2-220ENST00000640076 ZNF861PO60384 105 aa4.81□□□□□ -1.64
SCARB2-220ENST00000640076 RPL37AP61513 92 aaKnown RBP4.81□□□□□ -1.64
SCARB2-220ENST00000640076 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
SCARB2-220ENST00000640076 DNAL4O96015 105 aa4.8□□□□□ -1.64
SCARB2-220ENST00000640076 Q6ZQY7 126 aa4.8□□□□□ -1.64
SCARB2-220ENST00000640076 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
SCARB2-220ENST00000640076 BPY2O14599 106 aa4.79□□□□□ -1.64
SCARB2-220ENST00000640076 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-220ENST00000640076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-220ENST00000640076 ST20-AS1Q8NBB2 130 aa4.78□□□□□ -1.64
SCARB2-220ENST00000640076 A8MWP4 228 aa4.78□□□□□ -1.64
SCARB2-220ENST00000640076 Q1T7F1 81 aa4.77□□□□□ -1.65
SCARB2-220ENST00000640076 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
SCARB2-220ENST00000640076 ORMDL1Q9P0S3 153 aa4.77□□□□□ -1.65
SCARB2-220ENST00000640076 IGLV5-48A0A075B6I7 105 aa4.76□□□□□ -1.65
SCARB2-220ENST00000640076 BAALC-AS2P0C853 105 aa4.76□□□□□ -1.65
SCARB2-220ENST00000640076 DEFB105AQ8NG35 78 aa4.76□□□□□ -1.65
SCARB2-220ENST00000640076 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
SCARB2-220ENST00000640076 Q5VSD8 79 aa4.75□□□□□ -1.65
SCARB2-220ENST00000640076 SPRR4Q96PI1 79 aa4.75□□□□□ -1.65
SCARB2-220ENST00000640076 TEX49A0A1B0GTD5 131 aa4.74□□□□□ -1.65
SCARB2-220ENST00000640076 SPINK6Q6UWN8 80 aa4.74□□□□□ -1.65
SCARB2-220ENST00000640076 H3BQ85 93 aa4.74□□□□□ -1.65
SCARB2-220ENST00000640076 SPRR1BP22528 89 aa4.74□□□□□ -1.65
SCARB2-220ENST00000640076 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
SCARB2-220ENST00000640076 LINC01600Q96MT4 127 aa4.73□□□□□ -1.65
SCARB2-220ENST00000640076 NDUFC1O43677 76 aa4.73□□□□□ -1.65
SCARB2-220ENST00000640076 TYMSOSQ8TAI1 123 aa4.73□□□□□ -1.65
SCARB2-220ENST00000640076 ACYP1P07311 99 aa4.72□□□□□ -1.65
SCARB2-220ENST00000640076 IGKV2D-30A0A075B6S6 120 aa4.71□□□□□ -1.66
SCARB2-220ENST00000640076 KRTAP1-4P0C5Y4 121 aa4.71□□□□□ -1.66
SCARB2-220ENST00000640076 ANAPC11Q9NYG5 84 aa4.71□□□□□ -1.66
SCARB2-220ENST00000640076 HERC2O95714 4834 aa4.71□□□□□ -1.66
SCARB2-220ENST00000640076 LINC00643Q86TS7 51 aa4.71□□□□□ -1.66
SCARB2-220ENST00000640076 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
SCARB2-220ENST00000640076 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
SCARB2-220ENST00000640076 hDV103S1A0JD37 113 aa4.7□□□□□ -1.66
SCARB2-220ENST00000640076 H7BZZ5 65 aa4.69□□□□□ -1.66
SCARB2-220ENST00000640076 FAM229BQ4G0N7 80 aa4.69□□□□□ -1.66
SCARB2-220ENST00000640076 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
SCARB2-220ENST00000640076 C1orf64Q8NEQ6 169 aa4.69□□□□□ -1.66
SCARB2-220ENST00000640076 F8WEM9 126 aa4.68□□□□□ -1.66
SCARB2-220ENST00000640076 OBSCN-AS1Q96MR7 158 aa4.68□□□□□ -1.66
SCARB2-220ENST00000640076 JMJD7-PLA2G4BH0Y9G9 81 aa4.67□□□□□ -1.66
SCARB2-220ENST00000640076 ROMO1P60602 79 aa4.67□□□□□ -1.66
SCARB2-220ENST00000640076 KRTAP4-5Q9BYR2 181 aa4.67□□□□□ -1.66
SCARB2-220ENST00000640076 MOBPQ13875 183 aa4.66□□□□□ -1.66
SCARB2-220ENST00000640076 KRTAP13-2Q52LG2 175 aa4.66□□□□□ -1.66
SCARB2-220ENST00000640076 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
SCARB2-220ENST00000640076 LRP1Q07954 4544 aaKnown RBP4.66□□□□□ -1.66
SCARB2-220ENST00000640076 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
SCARB2-220ENST00000640076 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.67
SCARB2-220ENST00000640076 HCG22E2RYF7 251 aa4.65□□□□□ -1.67
SCARB2-220ENST00000640076 C14orf132Q9NPU4 83 aa4.65□□□□□ -1.67
SCARB2-220ENST00000640076 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
SCARB2-220ENST00000640076 LOC110117498A0A087WWA1 95 aa4.64□□□□□ -1.67
SCARB2-220ENST00000640076 A0A0G2JQZ4 141 aa4.64□□□□□ -1.67
SCARB2-220ENST00000640076 Q6JHZ5 121 aa4.64□□□□□ -1.67
SCARB2-220ENST00000640076 IGFL1Q6UW32 110 aa4.64□□□□□ -1.67
SCARB2-220ENST00000640076 KLKP1Q107X0 134 aa4.63□□□□□ -1.67
SCARB2-220ENST00000640076 Q6ZQT0 140 aa4.63□□□□□ -1.67
SCARB2-220ENST00000640076 SSBP3-AS1Q7Z2R9 100 aa4.63□□□□□ -1.67
SCARB2-220ENST00000640076 TNXBP22105 4242 aa4.62□□□□□ -1.67
SCARB2-220ENST00000640076 PDE6GP18545 87 aa4.62□□□□□ -1.67
SCARB2-220ENST00000640076 CYP4F30PQ9H0H9 118 aa4.62□□□□□ -1.67
SCARB2-220ENST00000640076 TRAV7A0A075B6U4 112 aa4.61□□□□□ -1.67
SCARB2-220ENST00000640076 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
SCARB2-220ENST00000640076 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
SCARB2-220ENST00000640076 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-220ENST00000640076 KRTAP9-8Q9BYQ0 159 aa4.6□□□□□ -1.67
SCARB2-220ENST00000640076 A8MUU9 505 aa4.59□□□□□ -1.67
SCARB2-220ENST00000640076 KRTAP10-8P60410 259 aa4.59□□□□□ -1.67
SCARB2-220ENST00000640076 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
SCARB2-220ENST00000640076 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
SCARB2-220ENST00000640076 DMBT1Q9UGM3 2413 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-220ENST00000640076 MT1HL1P0DM35 61 aa4.57□□□□□ -1.68
SCARB2-220ENST00000640076 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
SCARB2-220ENST00000640076 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
SCARB2-220ENST00000640076 TRAV22A0A0B4J277 110 aa4.56□□□□□ -1.68
SCARB2-220ENST00000640076 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SCARB2-220ENST00000640076 A0A087WSZ3 146 aa4.55□□□□□ -1.68
SCARB2-220ENST00000640076 KRTAP29-1A8MX34 341 aaPredicted RBP4.55□□□□□ -1.68
SCARB2-220ENST00000640076 SPAG11AQ6PDA7 123 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms