RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 DYNC2H1Q8NCM8 4307 aaKnown RBP3.46□□□□□ -1.86
SCARB2-218ENST00000639715 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SCARB2-218ENST00000639715 PSORS1C2Q9UIG4 136 aa3.45□□□□□ -1.86
SCARB2-218ENST00000639715 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
SCARB2-218ENST00000639715 LINC00472Q9H8W2 130 aa3.45□□□□□ -1.86
SCARB2-218ENST00000639715 MXRA5Q9NR99 2828 aa3.45□□□□□ -1.86
SCARB2-218ENST00000639715 DNAH3Q8TD57 4116 aa3.44□□□□□ -1.86
SCARB2-218ENST00000639715 DCHS2Q6V1P9 2916 aa3.44□□□□□ -1.86
SCARB2-218ENST00000639715 IGLV7-43P04211 117 aa3.44□□□□□ -1.86
SCARB2-218ENST00000639715 NIPBLQ6KC79 2804 aaeCLIP3.44□□□□□ -1.86
SCARB2-218ENST00000639715 SPACA4Q8TDM5 124 aa3.43□□□□□ -1.86
SCARB2-218ENST00000639715 DMAC1Q96GE9 116 aa3.43□□□□□ -1.86
SCARB2-218ENST00000639715 BSNQ9UPA5 3926 aa3.43□□□□□ -1.86
SCARB2-218ENST00000639715 ZFHX3Q15911 3703 aa3.42□□□□□ -1.86
SCARB2-218ENST00000639715 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
SCARB2-218ENST00000639715 NBEAL1Q6ZS30 2694 aa3.41□□□□□ -1.86
SCARB2-218ENST00000639715 HIVEP1P15822 2718 aa3.41□□□□□ -1.86
SCARB2-218ENST00000639715 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SCARB2-218ENST00000639715 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
SCARB2-218ENST00000639715 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.41□□□□□ -1.86
SCARB2-218ENST00000639715 A8MUU9 505 aa3.41□□□□□ -1.86
SCARB2-218ENST00000639715 CRYBG3Q68DQ2 2970 aa3.4□□□□□ -1.86
SCARB2-218ENST00000639715 CELSR2Q9HCU4 2923 aa3.4□□□□□ -1.87
SCARB2-218ENST00000639715 ANAPC11Q9NYG5 84 aa3.4□□□□□ -1.87
SCARB2-218ENST00000639715 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
SCARB2-218ENST00000639715 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
SCARB2-218ENST00000639715 SMG1Q96Q15 3661 aaKnown RBP3.38□□□□□ -1.87
SCARB2-218ENST00000639715 CSMD1Q96PZ7 3565 aa3.37□□□□□ -1.87
SCARB2-218ENST00000639715 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
SCARB2-218ENST00000639715 Q96NJ1 140 aa3.37□□□□□ -1.87
SCARB2-218ENST00000639715 C20orf166-AS1Q96NR2 134 aa3.37□□□□□ -1.87
SCARB2-218ENST00000639715 RYR3Q15413 4870 aa3.37□□□□□ -1.87
SCARB2-218ENST00000639715 A0A1B0GU33 70 aa3.36□□□□□ -1.87
SCARB2-218ENST00000639715 COX6B2Q6YFQ2 88 aa3.36□□□□□ -1.87
SCARB2-218ENST00000639715 RELNP78509 3460 aa3.36□□□□□ -1.87
SCARB2-218ENST00000639715 Q5W150 140 aa3.34□□□□□ -1.87
SCARB2-218ENST00000639715 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
SCARB2-218ENST00000639715 STAB2Q8WWQ8 2551 aa3.33□□□□□ -1.88
SCARB2-218ENST00000639715 Q8N1X5 172 aa3.33□□□□□ -1.88
SCARB2-218ENST00000639715 P0C880 135 aa3.32□□□□□ -1.88
SCARB2-218ENST00000639715 PANO1I0J062 215 aa3.31□□□□□ -1.88
SCARB2-218ENST00000639715 NOTCH2NLQ7Z3S9 236 aa3.31□□□□□ -1.88
SCARB2-218ENST00000639715 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
SCARB2-218ENST00000639715 HERC2O95714 4834 aa3.31□□□□□ -1.88
SCARB2-218ENST00000639715 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
SCARB2-218ENST00000639715 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
SCARB2-218ENST00000639715 A0A0D9SG42 100 aa3.29□□□□□ -1.88
SCARB2-218ENST00000639715 ANK3Q12955 4377 aaKnown RBP3.28□□□□□ -1.88
SCARB2-218ENST00000639715 CELSR1Q9NYQ6 3014 aa3.27□□□□□ -1.89
SCARB2-218ENST00000639715 H1FX-AS1Q4G0G2 97 aa3.25□□□□□ -1.89
SCARB2-218ENST00000639715 TENM3Q9P273 2699 aa3.25□□□□□ -1.89
SCARB2-218ENST00000639715 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
SCARB2-218ENST00000639715 SMR3BP02814 79 aaPredicted RBP3.24□□□□□ -1.89
SCARB2-218ENST00000639715 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
SCARB2-218ENST00000639715 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
SCARB2-218ENST00000639715 TENM1Q9UKZ4 2725 aa3.24□□□□□ -1.89
SCARB2-218ENST00000639715 Q6ZSA8 131 aa3.23□□□□□ -1.89
SCARB2-218ENST00000639715 KRTAP10-2P60368 255 aa3.23□□□□□ -1.89
SCARB2-218ENST00000639715 KRTAP10-1P60331 282 aa3.23□□□□□ -1.89
SCARB2-218ENST00000639715 M0R2T5 61 aa3.22□□□□□ -1.89
SCARB2-218ENST00000639715 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
SCARB2-218ENST00000639715 H0YAA0 97 aa3.22□□□□□ -1.89
SCARB2-218ENST00000639715 VWFP04275 2813 aa3.22□□□□□ -1.89
SCARB2-218ENST00000639715 VPS13CQ709C8 3753 aa3.21□□□□□ -1.9
SCARB2-218ENST00000639715 CMYA5Q8N3K9 4069 aa3.2□□□□□ -1.9
SCARB2-218ENST00000639715 MEGF8Q7Z7M0 2845 aa3.2□□□□□ -1.9
SCARB2-218ENST00000639715 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
SCARB2-218ENST00000639715 RYR2Q92736 4967 aa3.19□□□□□ -1.9
SCARB2-218ENST00000639715 CUBNO60494 3623 aa3.19□□□□□ -1.9
SCARB2-218ENST00000639715 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
SCARB2-218ENST00000639715 SVEP1Q4LDE5 3571 aa3.18□□□□□ -1.9
SCARB2-218ENST00000639715 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
SCARB2-218ENST00000639715 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
SCARB2-218ENST00000639715 CSMD2Q7Z408 3487 aa3.15□□□□□ -1.9
SCARB2-218ENST00000639715 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
SCARB2-218ENST00000639715 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
SCARB2-218ENST00000639715 LCE2DQ5TA82 110 aaPredicted RBP3.13□□□□□ -1.91
SCARB2-218ENST00000639715 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
SCARB2-218ENST00000639715 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
SCARB2-218ENST00000639715 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
SCARB2-218ENST00000639715 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
SCARB2-218ENST00000639715 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
SCARB2-218ENST00000639715 ZNF469Q96JG9 3925 aaPredicted RBP3.11□□□□□ -1.91
SCARB2-218ENST00000639715 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
SCARB2-218ENST00000639715 PKD1L1Q8TDX9 2849 aa3.09□□□□□ -1.91
SCARB2-218ENST00000639715 DNAH7Q8WXX0 4024 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 TRRAPQ9Y4A5 3859 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 KRTAP1-4P0C5Y4 121 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
SCARB2-218ENST00000639715 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 SACSQ9NZJ4 4579 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 LYSTQ99698 3801 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 FAT2Q9NYQ8 4349 aa3.08□□□□□ -1.92
SCARB2-218ENST00000639715 KRTAP3-3Q9BYR6 98 aa3.07□□□□□ -1.92
SCARB2-218ENST00000639715 KRTAP3-2Q9BYR7 98 aa3.07□□□□□ -1.92
SCARB2-218ENST00000639715 S4R3F8 94 aa3.07□□□□□ -1.92
SCARB2-218ENST00000639715 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
SCARB2-218ENST00000639715 Q5VSD8 79 aa3.05□□□□□ -1.92
SCARB2-218ENST00000639715 TGP01266 2768 aa3.05□□□□□ -1.92
SCARB2-218ENST00000639715 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms