RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 RYR3Q15413 4870 aa6.23□□□□□ -1.41
TARDBP-230ENST00000639083 ASB16-AS1Q495Z4 193 aa6.23□□□□□ -1.41
TARDBP-230ENST00000639083 C5orf47Q569G3 176 aa6.23□□□□□ -1.41
TARDBP-230ENST00000639083 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
TARDBP-230ENST00000639083 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
TARDBP-230ENST00000639083 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
TARDBP-230ENST00000639083 NDUFC1O43677 76 aa6.2□□□□□ -1.42
TARDBP-230ENST00000639083 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
TARDBP-230ENST00000639083 Q5XG85 94 aa6.2□□□□□ -1.42
TARDBP-230ENST00000639083 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
TARDBP-230ENST00000639083 C1orf195Q5TG92 126 aa6.2□□□□□ -1.42
TARDBP-230ENST00000639083 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
TARDBP-230ENST00000639083 MP68P56378 58 aa6.17□□□□□ -1.42
TARDBP-230ENST00000639083 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
TARDBP-230ENST00000639083 NDUFS5O43920 106 aa6.16□□□□□ -1.42
TARDBP-230ENST00000639083 SPINK1P00995 79 aa6.16□□□□□ -1.42
TARDBP-230ENST00000639083 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
TARDBP-230ENST00000639083 H0Y9P7 68 aa6.16□□□□□ -1.42
TARDBP-230ENST00000639083 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
TARDBP-230ENST00000639083 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
TARDBP-230ENST00000639083 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.43
TARDBP-230ENST00000639083 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.43
TARDBP-230ENST00000639083 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
TARDBP-230ENST00000639083 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
TARDBP-230ENST00000639083 TRAV22A0A0B4J277 110 aa6.14□□□□□ -1.43
TARDBP-230ENST00000639083 LINC00313P59037 77 aa6.13□□□□□ -1.43
TARDBP-230ENST00000639083 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
TARDBP-230ENST00000639083 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
TARDBP-230ENST00000639083 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
TARDBP-230ENST00000639083 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
TARDBP-230ENST00000639083 H3BPC8 53 aa6.1□□□□□ -1.43
TARDBP-230ENST00000639083 C4orf26Q17RF5 130 aa6.1□□□□□ -1.43
TARDBP-230ENST00000639083 HSPG2P98160 4391 aa6.1□□□□□ -1.43
TARDBP-230ENST00000639083 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.44
TARDBP-230ENST00000639083 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
TARDBP-230ENST00000639083 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
TARDBP-230ENST00000639083 PRR4Q16378 134 aa6.08□□□□□ -1.44
TARDBP-230ENST00000639083 Q5VSD8 79 aa6.08□□□□□ -1.44
TARDBP-230ENST00000639083 Q5W150 140 aa6.07□□□□□ -1.44
TARDBP-230ENST00000639083 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
TARDBP-230ENST00000639083 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
TARDBP-230ENST00000639083 RYR1P21817 5038 aa6.05□□□□□ -1.44
TARDBP-230ENST00000639083 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
TARDBP-230ENST00000639083 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
TARDBP-230ENST00000639083 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
TARDBP-230ENST00000639083 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
TARDBP-230ENST00000639083 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
TARDBP-230ENST00000639083 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.44
TARDBP-230ENST00000639083 PCOTHQ58A44 107 aa6.02□□□□□ -1.44
TARDBP-230ENST00000639083 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
TARDBP-230ENST00000639083 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
TARDBP-230ENST00000639083 Q8N1X5 172 aa6□□□□□ -1.45
TARDBP-230ENST00000639083 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
TARDBP-230ENST00000639083 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
TARDBP-230ENST00000639083 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
TARDBP-230ENST00000639083 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
TARDBP-230ENST00000639083 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
TARDBP-230ENST00000639083 TNXBP22105 4242 aa5.97□□□□□ -1.45
TARDBP-230ENST00000639083 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.45
TARDBP-230ENST00000639083 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.46
TARDBP-230ENST00000639083 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
TARDBP-230ENST00000639083 C9orf92A6NGG3 77 aa5.96□□□□□ -1.46
TARDBP-230ENST00000639083 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
TARDBP-230ENST00000639083 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
TARDBP-230ENST00000639083 IGKV2-30P06310 120 aa5.91□□□□□ -1.46
TARDBP-230ENST00000639083 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.46
TARDBP-230ENST00000639083 IGKV2D-30A0A075B6S6 120 aa5.88□□□□□ -1.47
TARDBP-230ENST00000639083 HRES1P13985 223 aa5.87□□□□□ -1.47
TARDBP-230ENST00000639083 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
TARDBP-230ENST00000639083 A8MUU9 505 aa5.87□□□□□ -1.47
TARDBP-230ENST00000639083 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
TARDBP-230ENST00000639083 COA5Q86WW8 74 aa5.85□□□□□ -1.47
TARDBP-230ENST00000639083 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
TARDBP-230ENST00000639083 PSPHP1O15172 72 aa5.81□□□□□ -1.48
TARDBP-230ENST00000639083 C7orf65Q6ZTY9 151 aa5.8□□□□□ -1.48
TARDBP-230ENST00000639083 Q75L30 129 aa5.79□□□□□ -1.48
TARDBP-230ENST00000639083 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
TARDBP-230ENST00000639083 ACYP2P14621 99 aa5.78□□□□□ -1.48
TARDBP-230ENST00000639083 Q1T7F1 81 aa5.78□□□□□ -1.48
TARDBP-230ENST00000639083 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
TARDBP-230ENST00000639083 A8MUN3 132 aa5.76□□□□□ -1.49
TARDBP-230ENST00000639083 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
TARDBP-230ENST00000639083 SPINK7P58062 85 aa5.74□□□□□ -1.49
TARDBP-230ENST00000639083 XP32Q5T750 250 aa5.73□□□□□ -1.49
TARDBP-230ENST00000639083 A8MU10 97 aa5.72□□□□□ -1.49
TARDBP-230ENST00000639083 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
TARDBP-230ENST00000639083 V9GYY9 64 aa5.72□□□□□ -1.49
TARDBP-230ENST00000639083 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.49
TARDBP-230ENST00000639083 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
TARDBP-230ENST00000639083 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
TARDBP-230ENST00000639083 Q5VV11 94 aa5.71□□□□□ -1.5
TARDBP-230ENST00000639083 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
TARDBP-230ENST00000639083 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.51
TARDBP-230ENST00000639083 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.51
TARDBP-230ENST00000639083 HERC2O95714 4834 aa5.64□□□□□ -1.51
TARDBP-230ENST00000639083 TPRXLQ17RH7 258 aa5.64□□□□□ -1.51
TARDBP-230ENST00000639083 BIRC6Q9NR09 4857 aa5.63□□□□□ -1.51
TARDBP-230ENST00000639083 LPAP08519 4548 aa5.62□□□□□ -1.51
TARDBP-230ENST00000639083 LRP2P98164 4655 aa5.61□□□□□ -1.51
TARDBP-230ENST00000639083 J3QL48 77 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms