RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
SCARB2-208ENST00000638372 FBN1P35555 2871 aaKnown RBP8.49□□□□□ -1.05
SCARB2-208ENST00000638372 OXTP01178 125 aa8.49□□□□□ -1.05
SCARB2-208ENST00000638372 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
SCARB2-208ENST00000638372 A0A087X002 238 aa8.49□□□□□ -1.05
SCARB2-208ENST00000638372 LCE6AA0A183 80 aa8.48□□□□□ -1.05
SCARB2-208ENST00000638372 KTN1-AS1Q86SY8 53 aa8.47□□□□□ -1.05
SCARB2-208ENST00000638372 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-208ENST00000638372 SPINK7P58062 85 aa8.46□□□□□ -1.05
SCARB2-208ENST00000638372 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
SCARB2-208ENST00000638372 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
SCARB2-208ENST00000638372 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-208ENST00000638372 A0A1B0GU33 70 aa8.43□□□□□ -1.06
SCARB2-208ENST00000638372 Q75L30 129 aa8.43□□□□□ -1.06
SCARB2-208ENST00000638372 PDZD2O15018 2839 aa8.43□□□□□ -1.06
SCARB2-208ENST00000638372 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
SCARB2-208ENST00000638372 Q5VSD8 79 aa8.42□□□□□ -1.06
SCARB2-208ENST00000638372 VWFP04275 2813 aa8.4□□□□□ -1.06
SCARB2-208ENST00000638372 Q5VV11 94 aa8.39□□□□□ -1.07
SCARB2-208ENST00000638372 LCA10Q71F78 164 aa8.36□□□□□ -1.07
SCARB2-208ENST00000638372 CSMD1Q96PZ7 3565 aa8.36□□□□□ -1.07
SCARB2-208ENST00000638372 CUBNO60494 3623 aa8.34□□□□□ -1.07
SCARB2-208ENST00000638372 SMG1Q96Q15 3661 aaKnown RBP8.34□□□□□ -1.08
SCARB2-208ENST00000638372 TENM2Q9NT68 2774 aa8.33□□□□□ -1.08
SCARB2-208ENST00000638372 TGP01266 2768 aa8.33□□□□□ -1.08
SCARB2-208ENST00000638372 OTOGQ6ZRI0 2925 aa8.32□□□□□ -1.08
SCARB2-208ENST00000638372 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
SCARB2-208ENST00000638372 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
SCARB2-208ENST00000638372 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.08
SCARB2-208ENST00000638372 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
SCARB2-208ENST00000638372 S4R3F8 94 aa8.26□□□□□ -1.09
SCARB2-208ENST00000638372 SVEP1Q4LDE5 3571 aa8.24□□□□□ -1.09
SCARB2-208ENST00000638372 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
SCARB2-208ENST00000638372 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
SCARB2-208ENST00000638372 SRRM2Q9UQ35 2752 aaKnown RBP8.22□□□□□ -1.09
SCARB2-208ENST00000638372 M0R2T5 61 aa8.21□□□□□ -1.09
SCARB2-208ENST00000638372 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.09
SCARB2-208ENST00000638372 NBPF19A0A087WUL8 3843 aa8.18□□□□□ -1.1
SCARB2-208ENST00000638372 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
SCARB2-208ENST00000638372 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.1
SCARB2-208ENST00000638372 R4GN34 69 aa8.14□□□□□ -1.11
SCARB2-208ENST00000638372 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
SCARB2-208ENST00000638372 SPATA8Q6RVD6 105 aa8.07□□□□□ -1.12
SCARB2-208ENST00000638372 RPL37P61927 97 aaKnown RBP8.05□□□□□ -1.12
SCARB2-208ENST00000638372 H1FX-AS1Q4G0G2 97 aa8.04□□□□□ -1.12
SCARB2-208ENST00000638372 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
SCARB2-208ENST00000638372 M0QZ58 72 aa8□□□□□ -1.13
SCARB2-208ENST00000638372 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
SCARB2-208ENST00000638372 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
SCARB2-208ENST00000638372 KRTAP21-3Q3LHN1 58 aa7.95□□□□□ -1.14
SCARB2-208ENST00000638372 A8MU10 97 aa7.95□□□□□ -1.14
SCARB2-208ENST00000638372 LUZP6Q538Z0 58 aa7.92□□□□□ -1.14
SCARB2-208ENST00000638372 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
SCARB2-208ENST00000638372 ROMO1P60602 79 aa7.9□□□□□ -1.15
SCARB2-208ENST00000638372 FBN3Q75N90 2809 aa7.87□□□□□ -1.15
SCARB2-208ENST00000638372 A8MUU9 505 aa7.82□□□□□ -1.16
SCARB2-208ENST00000638372 TRRAPQ9Y4A5 3859 aa7.8□□□□□ -1.16
SCARB2-208ENST00000638372 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
SCARB2-208ENST00000638372 A6NN06 94 aa7.77□□□□□ -1.17
SCARB2-208ENST00000638372 COL7A1Q02388 2944 aa7.77□□□□□ -1.17
SCARB2-208ENST00000638372 XP32Q5T750 250 aa7.66□□□□□ -1.18
SCARB2-208ENST00000638372 BSNQ9UPA5 3926 aa7.66□□□□□ -1.18
SCARB2-208ENST00000638372 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.18
SCARB2-208ENST00000638372 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
SCARB2-208ENST00000638372 KRTAP16-1A8MUX0 517 aa7.63□□□□□ -1.19
SCARB2-208ENST00000638372 H3BS24 57 aa7.59□□□□□ -1.19
SCARB2-208ENST00000638372 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
SCARB2-208ENST00000638372 ANK3Q12955 4377 aaKnown RBP7.57□□□□□ -1.2
SCARB2-208ENST00000638372 H0YAA0 97 aa7.45□□□□□ -1.22
SCARB2-208ENST00000638372 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
SCARB2-208ENST00000638372 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
SCARB2-208ENST00000638372 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
SCARB2-208ENST00000638372 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
SCARB2-208ENST00000638372 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
SCARB2-208ENST00000638372 KRTAP10-8P60410 259 aa7.4□□□□□ -1.23
SCARB2-208ENST00000638372 P0C880 135 aa7.37□□□□□ -1.23
SCARB2-208ENST00000638372 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
SCARB2-208ENST00000638372 TNP1P09430 55 aa7.32□□□□□ -1.24
SCARB2-208ENST00000638372 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
SCARB2-208ENST00000638372 ZNF469Q96JG9 3925 aaPredicted RBP7.23□□□□□ -1.25
SCARB2-208ENST00000638372 CSMD3Q7Z407 3707 aa7.2□□□□□ -1.26
SCARB2-208ENST00000638372 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
SCARB2-208ENST00000638372 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
SCARB2-208ENST00000638372 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
SCARB2-208ENST00000638372 HUWE1Q7Z6Z7 4374 aaKnown RBP7.02□□□□□ -1.29
SCARB2-208ENST00000638372 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
SCARB2-208ENST00000638372 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SCARB2-208ENST00000638372 KRTAP12-1P59990 96 aa6.91□□□□□ -1.3
SCARB2-208ENST00000638372 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
SCARB2-208ENST00000638372 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-208ENST00000638372 AKAP9Q99996 3911 aa6.86□□□□□ -1.31
SCARB2-208ENST00000638372 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
SCARB2-208ENST00000638372 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
SCARB2-208ENST00000638372 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
SCARB2-208ENST00000638372 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
SCARB2-208ENST00000638372 DNAH9Q9NYC9 4486 aa6.76□□□□□ -1.33
SCARB2-208ENST00000638372 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
SCARB2-208ENST00000638372 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
SCARB2-208ENST00000638372 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
SCARB2-208ENST00000638372 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms