RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 BDP1A6H8Y1 2624 aa0.81□□□□□ -2.28
CHRNA4-220ENST00000637628 SPTA1P02549 2419 aa0.8□□□□□ -2.28
CHRNA4-220ENST00000637628 C9orf92A6NGG3 77 aa0.8□□□□□ -2.28
CHRNA4-220ENST00000637628 H3BSH0 61 aa0.8□□□□□ -2.28
CHRNA4-220ENST00000637628 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 RYR2Q92736 4967 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 H3BNG1 76 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 PRM1P04553 51 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 LINC01590Q5TEZ4 76 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 RYR3Q15413 4870 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 CEP290O15078 2479 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 SYNE2Q8WXH0 6885 aaKnown RBP0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 KMT2CQ8NEZ4 4911 aaKnown RBP0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 SZT2Q5T011 3432 aa0.79□□□□□ -2.28
CHRNA4-220ENST00000637628 KALRNO60229 2985 aa0.78□□□□□ -2.28
CHRNA4-220ENST00000637628 GCN1Q92616 2671 aaKnown RBP0.78□□□□□ -2.28
CHRNA4-220ENST00000637628 PRCDQ00LT1 54 aa0.78□□□□□ -2.28
CHRNA4-220ENST00000637628 BSNQ9UPA5 3926 aa0.78□□□□□ -2.28
CHRNA4-220ENST00000637628 VCANP13611 3396 aa0.78□□□□□ -2.28
CHRNA4-220ENST00000637628 NBEAL2Q6ZNJ1 2754 aa0.78□□□□□ -2.29
CHRNA4-220ENST00000637628 PDZD2O15018 2839 aa0.78□□□□□ -2.29
CHRNA4-220ENST00000637628 FSIP2Q5CZC0 6907 aa0.77□□□□□ -2.29
CHRNA4-220ENST00000637628 TNP1P09430 55 aa0.77□□□□□ -2.29
CHRNA4-220ENST00000637628 DEFB104AQ8WTQ1 72 aa0.77□□□□□ -2.29
CHRNA4-220ENST00000637628 NEBP20929 6669 aa0.77□□□□□ -2.29
CHRNA4-220ENST00000637628 IGSF10Q6WRI0 2623 aa0.77□□□□□ -2.29
CHRNA4-220ENST00000637628 TENM1Q9UKZ4 2725 aa0.77□□□□□ -2.29
CHRNA4-220ENST00000637628 LAMA2P24043 3122 aaKnown RBP0.76□□□□□ -2.29
CHRNA4-220ENST00000637628 ATRQ13535 2644 aa0.76□□□□□ -2.29
CHRNA4-220ENST00000637628 ABCA13Q86UQ4 5058 aa0.76□□□□□ -2.29
CHRNA4-220ENST00000637628 NSD1Q96L73 2696 aaPredicted RBP0.75□□□□□ -2.29
CHRNA4-220ENST00000637628 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
CHRNA4-220ENST00000637628 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
CHRNA4-220ENST00000637628 KRTAP5-4Q6L8H1 288 aa0.75□□□□□ -2.29
CHRNA4-220ENST00000637628 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
CHRNA4-220ENST00000637628 HYDINQ4G0P3 5121 aa0.75□□□□□ -2.29
CHRNA4-220ENST00000637628 DNHD1Q96M86 4753 aa0.74□□□□□ -2.29
CHRNA4-220ENST00000637628 FLNCQ14315 2725 aa0.74□□□□□ -2.29
CHRNA4-220ENST00000637628 UBR5O95071 2799 aaPredicted RBP0.74□□□□□ -2.29
CHRNA4-220ENST00000637628 AKAP13Q12802 2813 aa0.74□□□□□ -2.29
CHRNA4-220ENST00000637628 BIRC6Q9NR09 4857 aa0.73□□□□□ -2.29
CHRNA4-220ENST00000637628 USP9YO00507 2555 aaPredicted RBP0.73□□□□□ -2.29
CHRNA4-220ENST00000637628 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 DEFB110Q30KQ9 67 aa0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 KRTAP5-7Q6L8G8 165 aa0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 FLNAP21333 2647 aaKnown RBP0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 ANK2Q01484 3957 aa0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 HERC1Q15751 4861 aa0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 CREBBPQ92793 2442 aa0.72□□□□□ -2.29
CHRNA4-220ENST00000637628 ACACAQ13085 2346 aa0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 ITPR1Q14643 2758 aa0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 SPART-AS1P0CW21 52 aa0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 HIVEP3Q5T1R4 2406 aa0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 APCP25054 2843 aa0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 MKI67P46013 3256 aaKnown RBP0.71□□□□□ -2.3
CHRNA4-220ENST00000637628 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
CHRNA4-220ENST00000637628 WNK1Q9H4A3 2382 aa0.7□□□□□ -2.3
CHRNA4-220ENST00000637628 SRRM2Q9UQ35 2752 aaKnown RBP0.7□□□□□ -2.3
CHRNA4-220ENST00000637628 EYSQ5T1H1 3165 aa0.7□□□□□ -2.3
CHRNA4-220ENST00000637628 OTOGQ6ZRI0 2925 aa0.7□□□□□ -2.3
CHRNA4-220ENST00000637628 FAT4Q6V0I7 4981 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 CSMD1Q96PZ7 3565 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 SSPOA2VEC9 5147 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 CFAP47Q6ZTR5 3102 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 MYO9AB2RTY4 2548 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 NBEAL1Q6ZS30 2694 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 TNXBP22105 4242 aa0.69□□□□□ -2.3
CHRNA4-220ENST00000637628 K7EIM0 57 aa0.68□□□□□ -2.3
CHRNA4-220ENST00000637628 KMT2DO14686 5537 aa0.68□□□□□ -2.3
CHRNA4-220ENST00000637628 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
CHRNA4-220ENST00000637628 SPG11Q96JI7 2443 aa0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 FAT2Q9NYQ8 4349 aa0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 CFAP46Q8IYW2 2715 aa0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 APC2O95996 2303 aa0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 RANBP2P49792 3224 aaKnown RBP0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 ACANP16112 2415 aa0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 SONP18583 2426 aaKnown RBP0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 ZNF469Q96JG9 3925 aaPredicted RBP0.67□□□□□ -2.3
CHRNA4-220ENST00000637628 ACACBO00763 2458 aa0.66□□□□□ -2.3
CHRNA4-220ENST00000637628 MAP1BP46821 2468 aaKnown RBP0.66□□□□□ -2.3
CHRNA4-220ENST00000637628 BOD1L1Q8NFC6 3051 aa0.66□□□□□ -2.3
CHRNA4-220ENST00000637628 SPEGQ15772 3267 aa0.66□□□□□ -2.3
CHRNA4-220ENST00000637628 TEX15Q9BXT5 2789 aa0.66□□□□□ -2.3
CHRNA4-220ENST00000637628 LYSTQ99698 3801 aa0.66□□□□□ -2.3
CHRNA4-220ENST00000637628 DMBT1Q9UGM3 2413 aaPredicted RBP0.65□□□□□ -2.31
CHRNA4-220ENST00000637628 KRTAP5-8O75690 187 aa0.65□□□□□ -2.31
CHRNA4-220ENST00000637628 KRTAP5-9P26371 169 aa0.65□□□□□ -2.31
CHRNA4-220ENST00000637628 KRTAP20-1Q3LI63 56 aa0.65□□□□□ -2.31
CHRNA4-220ENST00000637628 PRKDCP78527 4128 aaKnown RBP0.65□□□□□ -2.31
CHRNA4-220ENST00000637628 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
CHRNA4-220ENST00000637628 DNAH12Q6ZR08 3092 aa0.64□□□□□ -2.31
CHRNA4-220ENST00000637628 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
CHRNA4-220ENST00000637628 SPRR2DP22532 72 aa0.64□□□□□ -2.31
CHRNA4-220ENST00000637628 CHD7Q9P2D1 2997 aa0.64□□□□□ -2.31
CHRNA4-220ENST00000637628 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms