RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 CD164Q04900 197 aa11.27□□□□□ -0.61
CLN5-219ENST00000637537 LIMD2Q9BT23 127 aa11.26□□□□□ -0.61
CLN5-219ENST00000637537 H3BPC8 53 aa11.25□□□□□ -0.61
CLN5-219ENST00000637537 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
CLN5-219ENST00000637537 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
CLN5-219ENST00000637537 Q6ZSA8 131 aa11.23□□□□□ -0.61
CLN5-219ENST00000637537 CHKB-CPT1BH3BT56 60 aa11.22□□□□□ -0.61
CLN5-219ENST00000637537 ZNF706Q9Y5V0 76 aaPredicted RBP11.22□□□□□ -0.61
CLN5-219ENST00000637537 H0Y9P7 68 aa11.22□□□□□ -0.61
CLN5-219ENST00000637537 MOBPQ13875 183 aa11.2□□□□□ -0.62
CLN5-219ENST00000637537 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
CLN5-219ENST00000637537 PRR15LQ9BU68 103 aa11.18□□□□□ -0.62
CLN5-219ENST00000637537 VPS13BQ7Z7G8 4022 aa11.17□□□□□ -0.62
CLN5-219ENST00000637537 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
CLN5-219ENST00000637537 KTN1-AS1Q86SY8 53 aa11.16□□□□□ -0.62
CLN5-219ENST00000637537 Q75L30 129 aa11.15□□□□□ -0.62
CLN5-219ENST00000637537 LOC101927531A0A1B0GV80 90 aa11.14□□□□□ -0.63
CLN5-219ENST00000637537 LCA10Q71F78 164 aa11.13□□□□□ -0.63
CLN5-219ENST00000637537 KMT2CQ8NEZ4 4911 aaKnown RBP11.13□□□□□ -0.63
CLN5-219ENST00000637537 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
CLN5-219ENST00000637537 LINC00472Q9H8W2 130 aa11.12□□□□□ -0.63
CLN5-219ENST00000637537 COA5Q86WW8 74 aa11.09□□□□□ -0.63
CLN5-219ENST00000637537 A8MWP4 228 aa11.08□□□□□ -0.64
CLN5-219ENST00000637537 IGLV7-46A0A075B6I9 117 aa11.07□□□□□ -0.64
CLN5-219ENST00000637537 SPTSSBQ8NFR3 76 aa11.07□□□□□ -0.64
CLN5-219ENST00000637537 A6NN06 94 aa11.06□□□□□ -0.64
CLN5-219ENST00000637537 RYR2Q92736 4967 aa11.05□□□□□ -0.64
CLN5-219ENST00000637537 A6NED7 52 aa11.05□□□□□ -0.64
CLN5-219ENST00000637537 RBM12B-AS1Q9P1G2 102 aa11.05□□□□□ -0.64
CLN5-219ENST00000637537 Q96NJ1 140 aa11.04□□□□□ -0.64
CLN5-219ENST00000637537 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
CLN5-219ENST00000637537 A0A087X002 238 aa11.03□□□□□ -0.64
CLN5-219ENST00000637537 NDUFS5O43920 106 aa11.03□□□□□ -0.64
CLN5-219ENST00000637537 CDC42SE1Q9NRR8 79 aa11.02□□□□□ -0.64
CLN5-219ENST00000637537 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
CLN5-219ENST00000637537 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
CLN5-219ENST00000637537 KRTAP13-2Q52LG2 175 aa10.97□□□□□ -0.65
CLN5-219ENST00000637537 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.66
CLN5-219ENST00000637537 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
CLN5-219ENST00000637537 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
CLN5-219ENST00000637537 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
CLN5-219ENST00000637537 FAT1Q14517 4588 aa10.92□□□□□ -0.66
CLN5-219ENST00000637537 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
CLN5-219ENST00000637537 ASB16-AS1Q495Z4 193 aa10.91□□□□□ -0.66
CLN5-219ENST00000637537 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
CLN5-219ENST00000637537 SPAG11AQ6PDA7 123 aa10.9□□□□□ -0.67
CLN5-219ENST00000637537 APOBP04114 4563 aaKnown RBP10.89□□□□□ -0.67
CLN5-219ENST00000637537 IGHV6-1A0A0B4J1U7 121 aa10.89□□□□□ -0.67
CLN5-219ENST00000637537 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
CLN5-219ENST00000637537 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
CLN5-219ENST00000637537 PLA2G1BP04054 148 aaKnown RBP10.86□□□□□ -0.67
CLN5-219ENST00000637537 NOTCH2NLQ7Z3S9 236 aa10.85□□□□□ -0.67
CLN5-219ENST00000637537 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
CLN5-219ENST00000637537 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
CLN5-219ENST00000637537 SPINK7P58062 85 aa10.84□□□□□ -0.67
CLN5-219ENST00000637537 HRES1P13985 223 aa10.83□□□□□ -0.68
CLN5-219ENST00000637537 C8orf17Q9NRJ1 99 aa10.82□□□□□ -0.68
CLN5-219ENST00000637537 RYR3Q15413 4870 aa10.81□□□□□ -0.68
CLN5-219ENST00000637537 TYMSOSQ8TAI1 123 aa10.76□□□□□ -0.69
CLN5-219ENST00000637537 PRR26Q8N8Z3 221 aa10.75□□□□□ -0.69
CLN5-219ENST00000637537 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
CLN5-219ENST00000637537 MRPL34Q9BQ48 92 aaKnown RBP10.69□□□□□ -0.7
CLN5-219ENST00000637537 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
CLN5-219ENST00000637537 LINC00313P59037 77 aa10.61□□□□□ -0.71
CLN5-219ENST00000637537 SPINK1P00995 79 aa10.61□□□□□ -0.71
CLN5-219ENST00000637537 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
CLN5-219ENST00000637537 HSPG2P98160 4391 aa10.58□□□□□ -0.72
CLN5-219ENST00000637537 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
CLN5-219ENST00000637537 KRTAP13-3Q3SY46 172 aa10.57□□□□□ -0.72
CLN5-219ENST00000637537 Q5W150 140 aa10.55□□□□□ -0.72
CLN5-219ENST00000637537 PRAC1Q96KF2 57 aa10.54□□□□□ -0.72
CLN5-219ENST00000637537 ACYP2P14621 99 aa10.54□□□□□ -0.72
CLN5-219ENST00000637537 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
CLN5-219ENST00000637537 LRP1Q07954 4544 aaKnown RBP10.53□□□□□ -0.72
CLN5-219ENST00000637537 RETNLBQ9BQ08 111 aa10.5□□□□□ -0.73
CLN5-219ENST00000637537 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
CLN5-219ENST00000637537 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
CLN5-219ENST00000637537 ADM2Q7Z4H4 148 aa10.48□□□□□ -0.73
CLN5-219ENST00000637537 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
CLN5-219ENST00000637537 RYR1P21817 5038 aa10.47□□□□□ -0.73
CLN5-219ENST00000637537 DMAC1Q96GE9 116 aa10.47□□□□□ -0.73
CLN5-219ENST00000637537 Q5VSD8 79 aa10.46□□□□□ -0.73
CLN5-219ENST00000637537 SPATA8Q6RVD6 105 aa10.46□□□□□ -0.74
CLN5-219ENST00000637537 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
CLN5-219ENST00000637537 RPS29P62273 56 aaKnown RBP10.44□□□□□ -0.74
CLN5-219ENST00000637537 EPPK1P58107 5090 aaKnown RBP10.44□□□□□ -0.74
CLN5-219ENST00000637537 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
CLN5-219ENST00000637537 A0A1B0GU69 56 aa10.41□□□□□ -0.74
CLN5-219ENST00000637537 LINC01554Q52M75 96 aa10.4□□□□□ -0.74
CLN5-219ENST00000637537 TNXBP22105 4242 aa10.38□□□□□ -0.75
CLN5-219ENST00000637537 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
CLN5-219ENST00000637537 Q8N1X5 172 aa10.35□□□□□ -0.75
CLN5-219ENST00000637537 MYCBP2O75592 4640 aa10.34□□□□□ -0.75
CLN5-219ENST00000637537 MIR22HGQ0VDD5 57 aa10.33□□□□□ -0.76
CLN5-219ENST00000637537 UQCR11O14957 56 aa10.31□□□□□ -0.76
CLN5-219ENST00000637537 DMBT1Q9UGM3 2413 aaPredicted RBP10.3□□□□□ -0.76
CLN5-219ENST00000637537 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
CLN5-219ENST00000637537 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
CLN5-219ENST00000637537 KRTAP10-8P60410 259 aa10.27□□□□□ -0.77
CLN5-219ENST00000637537 IGKV2D-30A0A075B6S6 120 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms