RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 KRTAP10-8P60410 259 aa9.12□□□□□ -0.95
CACNA1A-221ENST00000636012 SPTBN5Q9NRC6 3674 aaKnown RBP9.11□□□□□ -0.95
CACNA1A-221ENST00000636012 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-221ENST00000636012 ATMQ13315 3056 aa9.07□□□□□ -0.96
CACNA1A-221ENST00000636012 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
CACNA1A-221ENST00000636012 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
CACNA1A-221ENST00000636012 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
CACNA1A-221ENST00000636012 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
CACNA1A-221ENST00000636012 WDFY3Q8IZQ1 3526 aa9.03□□□□□ -0.96
CACNA1A-221ENST00000636012 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
CACNA1A-221ENST00000636012 ZZEF1O43149 2961 aa8.99□□□□□ -0.97
CACNA1A-221ENST00000636012 UBR5O95071 2799 aaPredicted RBP8.98□□□□□ -0.97
CACNA1A-221ENST00000636012 EYSQ5T1H1 3165 aa8.98□□□□□ -0.97
CACNA1A-221ENST00000636012 IGSF10Q6WRI0 2623 aa8.98□□□□□ -0.97
CACNA1A-221ENST00000636012 ASPMQ8IZT6 3477 aa8.96□□□□□ -0.97
CACNA1A-221ENST00000636012 MYO15AQ9UKN7 3530 aa8.95□□□□□ -0.98
CACNA1A-221ENST00000636012 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
CACNA1A-221ENST00000636012 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
CACNA1A-221ENST00000636012 TACC2O95359 2948 aa8.92□□□□□ -0.98
CACNA1A-221ENST00000636012 ITPR1Q14643 2758 aa8.89□□□□□ -0.99
CACNA1A-221ENST00000636012 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
CACNA1A-221ENST00000636012 HIVEP1P15822 2718 aa8.89□□□□□ -0.99
CACNA1A-221ENST00000636012 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
CACNA1A-221ENST00000636012 LOC400499M0QZD8 3231 aa8.84□□□□□ -0.99
CACNA1A-221ENST00000636012 NBEAQ8NFP9 2946 aa8.84□□□□□ -0.99
CACNA1A-221ENST00000636012 NBPF19A0A087WUL8 3843 aa8.82□□□□□ -1
CACNA1A-221ENST00000636012 DMXL1Q9Y485 3027 aa8.81□□□□□ -1
CACNA1A-221ENST00000636012 DCHS1Q96JQ0 3298 aa8.79□□□□□ -1
CACNA1A-221ENST00000636012 CELSR2Q9HCU4 2923 aa8.79□□□□□ -1
CACNA1A-221ENST00000636012 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
CACNA1A-221ENST00000636012 TNRC18O15417 2968 aaPredicted RBP8.77□□□□□ -1.01
CACNA1A-221ENST00000636012 ZFHX4Q86UP3 3567 aa8.71□□□□□ -1.02
CACNA1A-221ENST00000636012 LAMA5O15230 3695 aa8.71□□□□□ -1.02
CACNA1A-221ENST00000636012 A6NN06 94 aa8.69□□□□□ -1.02
CACNA1A-221ENST00000636012 KRTAP13-1Q8IUC0 172 aa8.67□□□□□ -1.02
CACNA1A-221ENST00000636012 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
CACNA1A-221ENST00000636012 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
CACNA1A-221ENST00000636012 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
CACNA1A-221ENST00000636012 DCHS2Q6V1P9 2916 aa8.57□□□□□ -1.04
CACNA1A-221ENST00000636012 FLNCQ14315 2725 aa8.54□□□□□ -1.04
CACNA1A-221ENST00000636012 XP32Q5T750 250 aa8.53□□□□□ -1.04
CACNA1A-221ENST00000636012 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
CACNA1A-221ENST00000636012 CSMD1Q96PZ7 3565 aa8.51□□□□□ -1.05
CACNA1A-221ENST00000636012 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
CACNA1A-221ENST00000636012 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
CACNA1A-221ENST00000636012 NF1P21359 2839 aa8.47□□□□□ -1.05
CACNA1A-221ENST00000636012 FBN2P35556 2912 aa8.43□□□□□ -1.06
CACNA1A-221ENST00000636012 TENM4Q6N022 2769 aa8.41□□□□□ -1.06
CACNA1A-221ENST00000636012 RELNP78509 3460 aa8.4□□□□□ -1.07
CACNA1A-221ENST00000636012 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
CACNA1A-221ENST00000636012 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
CACNA1A-221ENST00000636012 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
CACNA1A-221ENST00000636012 SPENQ96T58 3664 aaKnown RBP8.32□□□□□ -1.08
CACNA1A-221ENST00000636012 H0YAA0 97 aa8.31□□□□□ -1.08
CACNA1A-221ENST00000636012 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
CACNA1A-221ENST00000636012 TGP01266 2768 aa8.23□□□□□ -1.09
CACNA1A-221ENST00000636012 ZFHX3Q15911 3703 aa8.22□□□□□ -1.09
CACNA1A-221ENST00000636012 CRCT1Q9UGL9 99 aa8.22□□□□□ -1.09
CACNA1A-221ENST00000636012 PKD1L1Q8TDX9 2849 aa8.21□□□□□ -1.09
CACNA1A-221ENST00000636012 TENM3Q9P273 2699 aa8.21□□□□□ -1.1
CACNA1A-221ENST00000636012 HRNRQ86YZ3 2850 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-221ENST00000636012 SMG1Q96Q15 3661 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-221ENST00000636012 VWFP04275 2813 aa8.18□□□□□ -1.1
CACNA1A-221ENST00000636012 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
CACNA1A-221ENST00000636012 PDZD2O15018 2839 aa8.15□□□□□ -1.11
CACNA1A-221ENST00000636012 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
CACNA1A-221ENST00000636012 DMDP11532 3685 aa8.11□□□□□ -1.11
CACNA1A-221ENST00000636012 TENM2Q9NT68 2774 aa8.11□□□□□ -1.11
CACNA1A-221ENST00000636012 MXRA5Q9NR99 2828 aa8.08□□□□□ -1.12
CACNA1A-221ENST00000636012 CUBNO60494 3623 aa8.04□□□□□ -1.12
CACNA1A-221ENST00000636012 SVEP1Q4LDE5 3571 aa8.01□□□□□ -1.13
CACNA1A-221ENST00000636012 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
CACNA1A-221ENST00000636012 MUC3AQ02505 3323 aa7.78□□□□□ -1.16
CACNA1A-221ENST00000636012 VPS13CQ709C8 3753 aa7.76□□□□□ -1.17
CACNA1A-221ENST00000636012 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CACNA1A-221ENST00000636012 SRRM2Q9UQ35 2752 aaKnown RBP7.75□□□□□ -1.17
CACNA1A-221ENST00000636012 COL7A1Q02388 2944 aa7.74□□□□□ -1.17
CACNA1A-221ENST00000636012 CSMD2Q7Z408 3487 aa7.72□□□□□ -1.17
CACNA1A-221ENST00000636012 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.17
CACNA1A-221ENST00000636012 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
CACNA1A-221ENST00000636012 BSNQ9UPA5 3926 aa7.65□□□□□ -1.19
CACNA1A-221ENST00000636012 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
CACNA1A-221ENST00000636012 CSMD3Q7Z407 3707 aa7.57□□□□□ -1.2
CACNA1A-221ENST00000636012 FBN1P35555 2871 aaKnown RBP7.55□□□□□ -1.2
CACNA1A-221ENST00000636012 FBN3Q75N90 2809 aa7.51□□□□□ -1.21
CACNA1A-221ENST00000636012 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
CACNA1A-221ENST00000636012 KRTAP10-6P60371 365 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-221ENST00000636012 OTOGQ6ZRI0 2925 aa7.36□□□□□ -1.23
CACNA1A-221ENST00000636012 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
CACNA1A-221ENST00000636012 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-221ENST00000636012 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
CACNA1A-221ENST00000636012 INE1O15225 51 aa7.28□□□□□ -1.24
CACNA1A-221ENST00000636012 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
CACNA1A-221ENST00000636012 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.27
CACNA1A-221ENST00000636012 ZNF469Q96JG9 3925 aaPredicted RBP7.13□□□□□ -1.27
CACNA1A-221ENST00000636012 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
CACNA1A-221ENST00000636012 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
CACNA1A-221ENST00000636012 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
CACNA1A-221ENST00000636012 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
CACNA1A-221ENST00000636012 ALMS1Q8TCU4 4167 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms