RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 A0A087X002 238 aa6.04□□□□□ -1.44
SYNGAP1-209ENST00000635885 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
SYNGAP1-209ENST00000635885 NOTCH2NLQ7Z3S9 236 aa6.04□□□□□ -1.44
SYNGAP1-209ENST00000635885 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
SYNGAP1-209ENST00000635885 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
SYNGAP1-209ENST00000635885 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
SYNGAP1-209ENST00000635885 HYDINQ4G0P3 5121 aa6.03□□□□□ -1.44
SYNGAP1-209ENST00000635885 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
SYNGAP1-209ENST00000635885 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
SYNGAP1-209ENST00000635885 C8orf87E5RJ46 101 aa6□□□□□ -1.45
SYNGAP1-209ENST00000635885 NDUFS5O43920 106 aa6□□□□□ -1.45
SYNGAP1-209ENST00000635885 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
SYNGAP1-209ENST00000635885 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
SYNGAP1-209ENST00000635885 PRR4Q16378 134 aa5.99□□□□□ -1.45
SYNGAP1-209ENST00000635885 LRP1BQ9NZR2 4599 aa5.98□□□□□ -1.45
SYNGAP1-209ENST00000635885 C1orf195Q5TG92 126 aa5.97□□□□□ -1.45
SYNGAP1-209ENST00000635885 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
SYNGAP1-209ENST00000635885 RYR2Q92736 4967 aa5.96□□□□□ -1.45
SYNGAP1-209ENST00000635885 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
SYNGAP1-209ENST00000635885 PLA2G1BP04054 148 aaKnown RBP5.93□□□□□ -1.46
SYNGAP1-209ENST00000635885 LINC00313P59037 77 aa5.93□□□□□ -1.46
SYNGAP1-209ENST00000635885 KRTAP13-3Q3SY46 172 aa5.93□□□□□ -1.46
SYNGAP1-209ENST00000635885 PCOTHQ58A44 107 aa5.93□□□□□ -1.46
SYNGAP1-209ENST00000635885 LIMD2Q9BT23 127 aa5.93□□□□□ -1.46
SYNGAP1-209ENST00000635885 Q5W150 140 aa5.92□□□□□ -1.46
SYNGAP1-209ENST00000635885 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
SYNGAP1-209ENST00000635885 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
SYNGAP1-209ENST00000635885 C4orf48Q5BLP8 95 aa5.91□□□□□ -1.46
SYNGAP1-209ENST00000635885 DYNC1H1Q14204 4646 aaKnown RBP5.9□□□□□ -1.46
SYNGAP1-209ENST00000635885 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
SYNGAP1-209ENST00000635885 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
SYNGAP1-209ENST00000635885 Q1T7F1 81 aa5.89□□□□□ -1.47
SYNGAP1-209ENST00000635885 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
SYNGAP1-209ENST00000635885 SPINK1P00995 79 aa5.88□□□□□ -1.47
SYNGAP1-209ENST00000635885 Q8N9P0 234 aaPredicted RBP5.88□□□□□ -1.47
SYNGAP1-209ENST00000635885 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
SYNGAP1-209ENST00000635885 SMR3BP02814 79 aaPredicted RBP5.87□□□□□ -1.47
SYNGAP1-209ENST00000635885 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
SYNGAP1-209ENST00000635885 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
SYNGAP1-209ENST00000635885 COA5Q86WW8 74 aa5.86□□□□□ -1.47
SYNGAP1-209ENST00000635885 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
SYNGAP1-209ENST00000635885 LINC00304Q8N9R0 145 aa5.85□□□□□ -1.47
SYNGAP1-209ENST00000635885 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
SYNGAP1-209ENST00000635885 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
SYNGAP1-209ENST00000635885 RPS29P62273 56 aaKnown RBP5.83□□□□□ -1.48
SYNGAP1-209ENST00000635885 RETNLBQ9BQ08 111 aa5.83□□□□□ -1.48
SYNGAP1-209ENST00000635885 V9GYY9 64 aa5.82□□□□□ -1.48
SYNGAP1-209ENST00000635885 APOBP04114 4563 aaKnown RBP5.82□□□□□ -1.48
SYNGAP1-209ENST00000635885 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
SYNGAP1-209ENST00000635885 HRES1P13985 223 aa5.8□□□□□ -1.48
SYNGAP1-209ENST00000635885 PKHD1P08F94 4074 aa5.79□□□□□ -1.48
SYNGAP1-209ENST00000635885 A8MUN3 132 aa5.76□□□□□ -1.49
SYNGAP1-209ENST00000635885 PSPHP1O15172 72 aa5.76□□□□□ -1.49
SYNGAP1-209ENST00000635885 RYR3Q15413 4870 aa5.75□□□□□ -1.49
SYNGAP1-209ENST00000635885 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
SYNGAP1-209ENST00000635885 ACYP2P14621 99 aa5.73□□□□□ -1.49
SYNGAP1-209ENST00000635885 Q5VSD8 79 aa5.73□□□□□ -1.49
SYNGAP1-209ENST00000635885 Q5VV11 94 aa5.73□□□□□ -1.49
SYNGAP1-209ENST00000635885 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
SYNGAP1-209ENST00000635885 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
SYNGAP1-209ENST00000635885 PRR15LQ9BU68 103 aa5.72□□□□□ -1.49
SYNGAP1-209ENST00000635885 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
SYNGAP1-209ENST00000635885 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
SYNGAP1-209ENST00000635885 Q8N1X5 172 aa5.7□□□□□ -1.5
SYNGAP1-209ENST00000635885 FAT1Q14517 4588 aa5.7□□□□□ -1.5
SYNGAP1-209ENST00000635885 A8MUU9 505 aa5.68□□□□□ -1.5
SYNGAP1-209ENST00000635885 Q75L30 129 aa5.67□□□□□ -1.5
SYNGAP1-209ENST00000635885 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
SYNGAP1-209ENST00000635885 CHKB-CPT1BH3BT56 60 aa5.66□□□□□ -1.5
SYNGAP1-209ENST00000635885 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
SYNGAP1-209ENST00000635885 RYR1P21817 5038 aa5.64□□□□□ -1.51
SYNGAP1-209ENST00000635885 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
SYNGAP1-209ENST00000635885 C7orf65Q6ZTY9 151 aa5.64□□□□□ -1.51
SYNGAP1-209ENST00000635885 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
SYNGAP1-209ENST00000635885 HSPG2P98160 4391 aa5.62□□□□□ -1.51
SYNGAP1-209ENST00000635885 A6NED7 52 aa5.58□□□□□ -1.52
SYNGAP1-209ENST00000635885 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
SYNGAP1-209ENST00000635885 TNXBP22105 4242 aa5.57□□□□□ -1.52
SYNGAP1-209ENST00000635885 A8MU10 97 aa5.56□□□□□ -1.52
SYNGAP1-209ENST00000635885 KRTAP17-1Q9BYP8 105 aa5.56□□□□□ -1.52
SYNGAP1-209ENST00000635885 SPINK7P58062 85 aa5.55□□□□□ -1.52
SYNGAP1-209ENST00000635885 LCA10Q71F78 164 aa5.55□□□□□ -1.52
SYNGAP1-209ENST00000635885 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
SYNGAP1-209ENST00000635885 KIAA1109Q2LD37 5005 aa5.54□□□□□ -1.52
SYNGAP1-209ENST00000635885 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
SYNGAP1-209ENST00000635885 A0A1B0GU69 56 aa5.5□□□□□ -1.53
SYNGAP1-209ENST00000635885 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
SYNGAP1-209ENST00000635885 BIRC6Q9NR09 4857 aa5.48□□□□□ -1.53
SYNGAP1-209ENST00000635885 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
SYNGAP1-209ENST00000635885 ATP11AUNQ6ZP68 121 aa5.47□□□□□ -1.53
SYNGAP1-209ENST00000635885 LRP1Q07954 4544 aaKnown RBP5.47□□□□□ -1.53
SYNGAP1-209ENST00000635885 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
SYNGAP1-209ENST00000635885 SPTSSBQ8NFR3 76 aa5.46□□□□□ -1.54
SYNGAP1-209ENST00000635885 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
SYNGAP1-209ENST00000635885 XP32Q5T750 250 aa5.43□□□□□ -1.54
SYNGAP1-209ENST00000635885 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
SYNGAP1-209ENST00000635885 KRTAP4-5Q9BYR2 181 aa5.42□□□□□ -1.54
SYNGAP1-209ENST00000635885 DMBT1Q9UGM3 2413 aaPredicted RBP5.41□□□□□ -1.54
SYNGAP1-209ENST00000635885 J3QL48 77 aa5.41□□□□□ -1.54
SYNGAP1-209ENST00000635885 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms