RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
CDKL5-209ENST00000635828 LINC00472Q9H8W2 130 aa4.66□□□□□ -1.66
CDKL5-209ENST00000635828 F8W1H4 67 aa4.66□□□□□ -1.66
CDKL5-209ENST00000635828 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
CDKL5-209ENST00000635828 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
CDKL5-209ENST00000635828 XP32Q5T750 250 aa4.65□□□□□ -1.67
CDKL5-209ENST00000635828 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
CDKL5-209ENST00000635828 IGKV4-1P06312 121 aa4.64□□□□□ -1.67
CDKL5-209ENST00000635828 ASB16-AS1Q495Z4 193 aa4.64□□□□□ -1.67
CDKL5-209ENST00000635828 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
CDKL5-209ENST00000635828 DSCR10P59022 87 aa4.63□□□□□ -1.67
CDKL5-209ENST00000635828 LINC00846Q9NV44 126 aa4.63□□□□□ -1.67
CDKL5-209ENST00000635828 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
CDKL5-209ENST00000635828 Q8N9L7 120 aa4.62□□□□□ -1.67
CDKL5-209ENST00000635828 IGHV6-1A0A0B4J1U7 121 aa4.6□□□□□ -1.67
CDKL5-209ENST00000635828 Q6ZVQ6 151 aa4.59□□□□□ -1.67
CDKL5-209ENST00000635828 FAM236DA0A1B0GTK5 79 aa4.59□□□□□ -1.68
CDKL5-209ENST00000635828 FAM236CP0DP71 79 aa4.59□□□□□ -1.68
CDKL5-209ENST00000635828 NREPQ16612 68 aa4.59□□□□□ -1.68
CDKL5-209ENST00000635828 IGKV3D-7A0A0C4DH55 119 aa4.58□□□□□ -1.68
CDKL5-209ENST00000635828 PDE6GP18545 87 aa4.58□□□□□ -1.68
CDKL5-209ENST00000635828 FAM236AA0A1B0GUQ0 79 aa4.58□□□□□ -1.68
CDKL5-209ENST00000635828 FAM236BA0A1B0GV22 79 aa4.58□□□□□ -1.68
CDKL5-209ENST00000635828 K7EQZ3 153 aa4.58□□□□□ -1.68
CDKL5-209ENST00000635828 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
CDKL5-209ENST00000635828 BPY2O14599 106 aa4.56□□□□□ -1.68
CDKL5-209ENST00000635828 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
CDKL5-209ENST00000635828 A0A1B0GVX0 72 aa4.55□□□□□ -1.68
CDKL5-209ENST00000635828 LINC00313P59037 77 aa4.54□□□□□ -1.68
CDKL5-209ENST00000635828 A8MWP4 228 aa4.53□□□□□ -1.68
CDKL5-209ENST00000635828 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
CDKL5-209ENST00000635828 C4orf26Q17RF5 130 aa4.52□□□□□ -1.69
CDKL5-209ENST00000635828 A0A1B0GW54 56 aa4.51□□□□□ -1.69
CDKL5-209ENST00000635828 HIST1H4AP62805 103 aaKnown RBP4.51□□□□□ -1.69
CDKL5-209ENST00000635828 PRR15Q8IV56 129 aa4.51□□□□□ -1.69
CDKL5-209ENST00000635828 C8orf17Q9NRJ1 99 aa4.5□□□□□ -1.69
CDKL5-209ENST00000635828 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
CDKL5-209ENST00000635828 UBL5Q9BZL1 73 aa4.5□□□□□ -1.69
CDKL5-209ENST00000635828 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
CDKL5-209ENST00000635828 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
CDKL5-209ENST00000635828 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
CDKL5-209ENST00000635828 A8MUU9 505 aa4.48□□□□□ -1.69
CDKL5-209ENST00000635828 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
CDKL5-209ENST00000635828 Q75L30 129 aa4.48□□□□□ -1.69
CDKL5-209ENST00000635828 H3BS24 57 aa4.47□□□□□ -1.69
CDKL5-209ENST00000635828 UQCRQO14949 82 aa4.47□□□□□ -1.69
CDKL5-209ENST00000635828 NDUFB1O75438 58 aa4.47□□□□□ -1.69
CDKL5-209ENST00000635828 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
CDKL5-209ENST00000635828 A0A087WVE0 104 aa4.46□□□□□ -1.7
CDKL5-209ENST00000635828 hDV103S1A0JD37 113 aa4.45□□□□□ -1.7
CDKL5-209ENST00000635828 TMEM258P61165 79 aa4.45□□□□□ -1.7
CDKL5-209ENST00000635828 FAM240AA0A1B0GVK7 77 aa4.44□□□□□ -1.7
CDKL5-209ENST00000635828 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
CDKL5-209ENST00000635828 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
CDKL5-209ENST00000635828 ATP11AUNQ6ZP68 121 aa4.44□□□□□ -1.7
CDKL5-209ENST00000635828 Q8N9P0 234 aaPredicted RBP4.44□□□□□ -1.7
CDKL5-209ENST00000635828 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
CDKL5-209ENST00000635828 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
CDKL5-209ENST00000635828 C8orf87E5RJ46 101 aa4.43□□□□□ -1.7
CDKL5-209ENST00000635828 Q5W150 140 aa4.43□□□□□ -1.7
CDKL5-209ENST00000635828 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
CDKL5-209ENST00000635828 ATOX1O00244 68 aa4.42□□□□□ -1.7
CDKL5-209ENST00000635828 NDUFS5O43920 106 aa4.42□□□□□ -1.7
CDKL5-209ENST00000635828 ACYP1P07311 99 aa4.42□□□□□ -1.7
CDKL5-209ENST00000635828 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
CDKL5-209ENST00000635828 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
CDKL5-209ENST00000635828 CXCL6P80162 114 aa4.41□□□□□ -1.7
CDKL5-209ENST00000635828 LCE2CQ5TA81 110 aa4.41□□□□□ -1.7
CDKL5-209ENST00000635828 HCG22E2RYF7 251 aa4.4□□□□□ -1.7
CDKL5-209ENST00000635828 C20orf197Q8N268 126 aa4.4□□□□□ -1.71
CDKL5-209ENST00000635828 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
CDKL5-209ENST00000635828 COX7CP15954 63 aa4.38□□□□□ -1.71
CDKL5-209ENST00000635828 ZCCHC13Q8WW36 166 aaKnown RBP4.38□□□□□ -1.71
CDKL5-209ENST00000635828 LINC00643Q86TS7 51 aa4.38□□□□□ -1.71
CDKL5-209ENST00000635828 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
CDKL5-209ENST00000635828 SPINK7P58062 85 aa4.35□□□□□ -1.71
CDKL5-209ENST00000635828 HRES1P13985 223 aa4.33□□□□□ -1.72
CDKL5-209ENST00000635828 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
CDKL5-209ENST00000635828 LCE2AQ5TA79 106 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-209ENST00000635828 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
CDKL5-209ENST00000635828 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
CDKL5-209ENST00000635828 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
CDKL5-209ENST00000635828 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
CDKL5-209ENST00000635828 MT1HP80294 61 aa4.31□□□□□ -1.72
CDKL5-209ENST00000635828 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
CDKL5-209ENST00000635828 SERP1Q9Y6X1 66 aa4.29□□□□□ -1.72
CDKL5-209ENST00000635828 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
CDKL5-209ENST00000635828 PSPHP1O15172 72 aa4.27□□□□□ -1.73
CDKL5-209ENST00000635828 IMUPQ9GZP8 106 aa4.27□□□□□ -1.73
CDKL5-209ENST00000635828 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
CDKL5-209ENST00000635828 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
CDKL5-209ENST00000635828 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
CDKL5-209ENST00000635828 C7orf65Q6ZTY9 151 aa4.23□□□□□ -1.73
CDKL5-209ENST00000635828 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
CDKL5-209ENST00000635828 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
CDKL5-209ENST00000635828 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
CDKL5-209ENST00000635828 H0Y9P7 68 aa4.22□□□□□ -1.73
CDKL5-209ENST00000635828 A6NED7 52 aa4.21□□□□□ -1.74
CDKL5-209ENST00000635828 M0R2T5 61 aa4.2□□□□□ -1.74
CDKL5-209ENST00000635828 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms