RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
TCF4-276ENST00000635822 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
TCF4-276ENST00000635822 ZFHX4Q86UP3 3567 aa6.8□□□□□ -1.32
TCF4-276ENST00000635822 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
TCF4-276ENST00000635822 PANO1I0J062 215 aa6.78□□□□□ -1.32
TCF4-276ENST00000635822 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
TCF4-276ENST00000635822 HIVEP1P15822 2718 aa6.77□□□□□ -1.33
TCF4-276ENST00000635822 Q6ZSA8 131 aa6.77□□□□□ -1.33
TCF4-276ENST00000635822 KRTAP11-1Q8IUC1 163 aa6.76□□□□□ -1.33
TCF4-276ENST00000635822 R4GN34 69 aa6.76□□□□□ -1.33
TCF4-276ENST00000635822 LAMA5O15230 3695 aa6.75□□□□□ -1.33
TCF4-276ENST00000635822 A8MUU9 505 aa6.73□□□□□ -1.33
TCF4-276ENST00000635822 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
TCF4-276ENST00000635822 CRYBG3Q68DQ2 2970 aa6.71□□□□□ -1.34
TCF4-276ENST00000635822 J3QL48 77 aa6.7□□□□□ -1.34
TCF4-276ENST00000635822 M0QZ58 72 aa6.68□□□□□ -1.34
TCF4-276ENST00000635822 FBN2P35556 2912 aa6.66□□□□□ -1.34
TCF4-276ENST00000635822 ITPR2Q14571 2701 aa6.65□□□□□ -1.35
TCF4-276ENST00000635822 RELNP78509 3460 aa6.63□□□□□ -1.35
TCF4-276ENST00000635822 CUBNO60494 3623 aa6.62□□□□□ -1.35
TCF4-276ENST00000635822 ZANQ9Y493 2812 aa6.61□□□□□ -1.35
TCF4-276ENST00000635822 SMG1Q96Q15 3661 aaKnown RBP6.59□□□□□ -1.35
TCF4-276ENST00000635822 DCHS2Q6V1P9 2916 aa6.59□□□□□ -1.35
TCF4-276ENST00000635822 DMDP11532 3685 aa6.58□□□□□ -1.36
TCF4-276ENST00000635822 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
TCF4-276ENST00000635822 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
TCF4-276ENST00000635822 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
TCF4-276ENST00000635822 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
TCF4-276ENST00000635822 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
TCF4-276ENST00000635822 FLNCQ14315 2725 aa6.54□□□□□ -1.36
TCF4-276ENST00000635822 HRNRQ86YZ3 2850 aaPredicted RBP6.53□□□□□ -1.36
TCF4-276ENST00000635822 CELSR1Q9NYQ6 3014 aa6.53□□□□□ -1.36
TCF4-276ENST00000635822 SVEP1Q4LDE5 3571 aa6.52□□□□□ -1.37
TCF4-276ENST00000635822 NF1P21359 2839 aa6.52□□□□□ -1.37
TCF4-276ENST00000635822 IGSF10Q6WRI0 2623 aa6.51□□□□□ -1.37
TCF4-276ENST00000635822 H0YAA0 97 aa6.48□□□□□ -1.37
TCF4-276ENST00000635822 M0R2T5 61 aa6.48□□□□□ -1.37
TCF4-276ENST00000635822 KRTAP13-1Q8IUC0 172 aa6.47□□□□□ -1.37
TCF4-276ENST00000635822 SPENQ96T58 3664 aaKnown RBP6.46□□□□□ -1.37
TCF4-276ENST00000635822 KRTAP13-2Q52LG2 175 aa6.42□□□□□ -1.38
TCF4-276ENST00000635822 KMT2BQ9UMN6 2715 aaPredicted RBP6.42□□□□□ -1.38
TCF4-276ENST00000635822 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.38
TCF4-276ENST00000635822 TGP01266 2768 aa6.38□□□□□ -1.39
TCF4-276ENST00000635822 PDZD2O15018 2839 aa6.37□□□□□ -1.39
TCF4-276ENST00000635822 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
TCF4-276ENST00000635822 MXRA5Q9NR99 2828 aa6.32□□□□□ -1.4
TCF4-276ENST00000635822 Q5VSD8 79 aa6.3□□□□□ -1.4
TCF4-276ENST00000635822 SEC61BP60468 96 aaKnown RBP6.29□□□□□ -1.4
TCF4-276ENST00000635822 P0C880 135 aa6.28□□□□□ -1.4
TCF4-276ENST00000635822 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
TCF4-276ENST00000635822 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
TCF4-276ENST00000635822 MUC3AQ02505 3323 aa6.22□□□□□ -1.41
TCF4-276ENST00000635822 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
TCF4-276ENST00000635822 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
TCF4-276ENST00000635822 TNP1P09430 55 aa6.18□□□□□ -1.42
TCF4-276ENST00000635822 TENM1Q9UKZ4 2725 aa6.15□□□□□ -1.42
TCF4-276ENST00000635822 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
TCF4-276ENST00000635822 CSMD2Q7Z408 3487 aa6.11□□□□□ -1.43
TCF4-276ENST00000635822 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
TCF4-276ENST00000635822 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
TCF4-276ENST00000635822 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
TCF4-276ENST00000635822 PKD1L1Q8TDX9 2849 aa6.04□□□□□ -1.44
TCF4-276ENST00000635822 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
TCF4-276ENST00000635822 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
TCF4-276ENST00000635822 KRTAP12-2P59991 146 aa6□□□□□ -1.45
TCF4-276ENST00000635822 VWFP04275 2813 aa6□□□□□ -1.45
TCF4-276ENST00000635822 TENM4Q6N022 2769 aa6□□□□□ -1.45
TCF4-276ENST00000635822 XP32Q5T750 250 aa5.93□□□□□ -1.46
TCF4-276ENST00000635822 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
TCF4-276ENST00000635822 VPS13CQ709C8 3753 aa5.92□□□□□ -1.46
TCF4-276ENST00000635822 FBN1P35555 2871 aaKnown RBP5.89□□□□□ -1.47
TCF4-276ENST00000635822 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
TCF4-276ENST00000635822 TENM2Q9NT68 2774 aa5.87□□□□□ -1.47
TCF4-276ENST00000635822 OTOGQ6ZRI0 2925 aa5.85□□□□□ -1.47
TCF4-276ENST00000635822 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.47
TCF4-276ENST00000635822 FBN3Q75N90 2809 aa5.84□□□□□ -1.47
TCF4-276ENST00000635822 KRTAP12-1P59990 96 aa5.84□□□□□ -1.48
TCF4-276ENST00000635822 CSMD3Q7Z407 3707 aa5.83□□□□□ -1.48
TCF4-276ENST00000635822 BSNQ9UPA5 3926 aa5.81□□□□□ -1.48
TCF4-276ENST00000635822 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
TCF4-276ENST00000635822 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
TCF4-276ENST00000635822 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
TCF4-276ENST00000635822 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
TCF4-276ENST00000635822 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
TCF4-276ENST00000635822 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
TCF4-276ENST00000635822 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
TCF4-276ENST00000635822 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
TCF4-276ENST00000635822 ANK3Q12955 4377 aaKnown RBP5.43□□□□□ -1.54
TCF4-276ENST00000635822 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
TCF4-276ENST00000635822 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
TCF4-276ENST00000635822 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.55
TCF4-276ENST00000635822 INE1O15225 51 aa5.4□□□□□ -1.55
TCF4-276ENST00000635822 ALMS1Q8TCU4 4167 aa5.26□□□□□ -1.57
TCF4-276ENST00000635822 HUWE1Q7Z6Z7 4374 aaKnown RBP5.21□□□□□ -1.58
TCF4-276ENST00000635822 DNAH10Q8IVF4 4471 aa5.1□□□□□ -1.59
TCF4-276ENST00000635822 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
TCF4-276ENST00000635822 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
TCF4-276ENST00000635822 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
TCF4-276ENST00000635822 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
TCF4-276ENST00000635822 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms