RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
LINC00339-208ENST00000634934 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
LINC00339-208ENST00000634934 J3QL48 77 aa8.53□□□□□ -1.04
LINC00339-208ENST00000634934 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
LINC00339-208ENST00000634934 C5orf47Q569G3 176 aa8.53□□□□□ -1.04
LINC00339-208ENST00000634934 F8WEM9 126 aa8.51□□□□□ -1.05
LINC00339-208ENST00000634934 MOBPQ13875 183 aa8.51□□□□□ -1.05
LINC00339-208ENST00000634934 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
LINC00339-208ENST00000634934 Q5XG85 94 aa8.5□□□□□ -1.05
LINC00339-208ENST00000634934 TNXBP22105 4242 aa8.5□□□□□ -1.05
LINC00339-208ENST00000634934 SNURFQ9Y675 71 aa8.49□□□□□ -1.05
LINC00339-208ENST00000634934 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
LINC00339-208ENST00000634934 DSCR10P59022 87 aa8.48□□□□□ -1.05
LINC00339-208ENST00000634934 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
LINC00339-208ENST00000634934 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
LINC00339-208ENST00000634934 Q8N9L7 120 aa8.47□□□□□ -1.05
LINC00339-208ENST00000634934 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
LINC00339-208ENST00000634934 IGFL1Q6UW32 110 aa8.44□□□□□ -1.06
LINC00339-208ENST00000634934 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
LINC00339-208ENST00000634934 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
LINC00339-208ENST00000634934 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
LINC00339-208ENST00000634934 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
LINC00339-208ENST00000634934 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
LINC00339-208ENST00000634934 K7EQZ3 153 aa8.39□□□□□ -1.07
LINC00339-208ENST00000634934 HRCT1Q6UXD1 115 aa8.39□□□□□ -1.07
LINC00339-208ENST00000634934 H3BPC8 53 aa8.37□□□□□ -1.07
LINC00339-208ENST00000634934 NDUFB1O75438 58 aa8.35□□□□□ -1.07
LINC00339-208ENST00000634934 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
LINC00339-208ENST00000634934 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
LINC00339-208ENST00000634934 FP248Q71RG6 208 aaPredicted RBP8.34□□□□□ -1.07
LINC00339-208ENST00000634934 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.08
LINC00339-208ENST00000634934 A0A087WSZ3 146 aa8.32□□□□□ -1.08
LINC00339-208ENST00000634934 SPINK1P00995 79 aa8.32□□□□□ -1.08
LINC00339-208ENST00000634934 CD164Q04900 197 aa8.32□□□□□ -1.08
LINC00339-208ENST00000634934 LINC00472Q9H8W2 130 aa8.32□□□□□ -1.08
LINC00339-208ENST00000634934 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
LINC00339-208ENST00000634934 HMCN2Q8NDA2 5059 aa8.3□□□□□ -1.08
LINC00339-208ENST00000634934 A8MWP4 228 aa8.3□□□□□ -1.08
LINC00339-208ENST00000634934 MP68P56378 58 aa8.28□□□□□ -1.08
LINC00339-208ENST00000634934 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
LINC00339-208ENST00000634934 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
LINC00339-208ENST00000634934 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
LINC00339-208ENST00000634934 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
LINC00339-208ENST00000634934 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
LINC00339-208ENST00000634934 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
LINC00339-208ENST00000634934 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
LINC00339-208ENST00000634934 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
LINC00339-208ENST00000634934 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
LINC00339-208ENST00000634934 Q1T7F1 81 aa8.2□□□□□ -1.1
LINC00339-208ENST00000634934 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
LINC00339-208ENST00000634934 MMP24-AS1A0A0U1RRL7 71 aa8.18□□□□□ -1.1
LINC00339-208ENST00000634934 WFDC13Q8IUB5 93 aa8.18□□□□□ -1.1
LINC00339-208ENST00000634934 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
LINC00339-208ENST00000634934 Q96NJ1 140 aa8.16□□□□□ -1.1
LINC00339-208ENST00000634934 H0Y9P7 68 aa8.15□□□□□ -1.1
LINC00339-208ENST00000634934 PRR4Q16378 134 aa8.15□□□□□ -1.1
LINC00339-208ENST00000634934 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
LINC00339-208ENST00000634934 V9GYY9 64 aa8.15□□□□□ -1.1
LINC00339-208ENST00000634934 DEFB116Q30KQ4 102 aa8.14□□□□□ -1.11
LINC00339-208ENST00000634934 LINC00208Q96KT6 92 aa8.13□□□□□ -1.11
LINC00339-208ENST00000634934 LPAP08519 4548 aa8.11□□□□□ -1.11
LINC00339-208ENST00000634934 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
LINC00339-208ENST00000634934 LRP2P98164 4655 aa8.09□□□□□ -1.11
LINC00339-208ENST00000634934 IGLV7-46A0A075B6I9 117 aa8.09□□□□□ -1.11
LINC00339-208ENST00000634934 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
LINC00339-208ENST00000634934 C8orf17Q9NRJ1 99 aa8.07□□□□□ -1.12
LINC00339-208ENST00000634934 MPLKIPQ8TAP9 179 aa8.05□□□□□ -1.12
LINC00339-208ENST00000634934 LCE2BO14633 110 aa8.04□□□□□ -1.12
LINC00339-208ENST00000634934 MRPL34Q9BQ48 92 aaKnown RBP8□□□□□ -1.13
LINC00339-208ENST00000634934 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
LINC00339-208ENST00000634934 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
LINC00339-208ENST00000634934 C8orf87E5RJ46 101 aa7.97□□□□□ -1.13
LINC00339-208ENST00000634934 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
LINC00339-208ENST00000634934 BRK1Q8WUW1 75 aa7.97□□□□□ -1.13
LINC00339-208ENST00000634934 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.14
LINC00339-208ENST00000634934 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
LINC00339-208ENST00000634934 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
LINC00339-208ENST00000634934 COA5Q86WW8 74 aa7.91□□□□□ -1.14
LINC00339-208ENST00000634934 LINC00313P59037 77 aa7.9□□□□□ -1.14
LINC00339-208ENST00000634934 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
LINC00339-208ENST00000634934 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
LINC00339-208ENST00000634934 Q5VV11 94 aa7.88□□□□□ -1.15
LINC00339-208ENST00000634934 XP32Q5T750 250 aa7.88□□□□□ -1.15
LINC00339-208ENST00000634934 Q75L30 129 aa7.87□□□□□ -1.15
LINC00339-208ENST00000634934 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
LINC00339-208ENST00000634934 A8MUN3 132 aa7.84□□□□□ -1.15
LINC00339-208ENST00000634934 PSPHP1O15172 72 aa7.83□□□□□ -1.16
LINC00339-208ENST00000634934 NDUFS5O43920 106 aa7.83□□□□□ -1.16
LINC00339-208ENST00000634934 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
LINC00339-208ENST00000634934 PCOTHQ58A44 107 aa7.81□□□□□ -1.16
LINC00339-208ENST00000634934 MUC2Q02817 5179 aa7.79□□□□□ -1.16
LINC00339-208ENST00000634934 HRES1P13985 223 aa7.78□□□□□ -1.16
LINC00339-208ENST00000634934 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
LINC00339-208ENST00000634934 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
LINC00339-208ENST00000634934 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
LINC00339-208ENST00000634934 A8MUU9 505 aa7.76□□□□□ -1.17
LINC00339-208ENST00000634934 Q5W150 140 aa7.76□□□□□ -1.17
LINC00339-208ENST00000634934 MUC17Q685J3 4493 aa7.76□□□□□ -1.17
LINC00339-208ENST00000634934 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
LINC00339-208ENST00000634934 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms