RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 BAGE3Q86Y29 109 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 ANKRD29Q8N6D5 301 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BHQ93079 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BNQ99877 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BMQ99879 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 LIMD2Q9BT23 127 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 TRAV7A0A075B6U4 112 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 A0A0G2JQZ4 141 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 FAM236DA0A1B0GTK5 79 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 C9orf92A6NGG3 77 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 H3BT86 120 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 FAM236CP0DP71 79 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 HINT1P49773 126 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 LINC00158P58513 81 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 ELOF1P60002 83 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 RHEBQ15382 184 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 TMEM170BQ5T4T1 132 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 C9orf153Q5TBE3 101 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 IFI27L1Q96BM0 104 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 SEC11CQ9BY50 192 aa1.07□□□□□ -2.24
SMARCB1-208ENST00000634926 KMT2DO14686 5537 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 TRBV7-6A0A0J9YX20 115 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 MYMXA0A1B0GTQ4 84 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 H7C2G1 150 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 J3QQQ9 107 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 M0R2T5 61 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 PLNP26678 52 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 MEIG1Q5JSS6 88 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 CHCHD1Q96BP2 118 aaKnown RBP1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 SIGMAR1Q99720 223 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 SMCO4Q9NRQ5 59 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 SPANXCQ9NY87 97 aa1.06□□□□□ -2.24
SMARCB1-208ENST00000634926 LINC00587B1AMM8 73 aa1.05□□□□□ -2.24
SMARCB1-208ENST00000634926 TIMM17BO60830 172 aa1.05□□□□□ -2.24
SMARCB1-208ENST00000634926 S100PP25815 95 aa1.05□□□□□ -2.24
SMARCB1-208ENST00000634926 TMEM258P61165 79 aa1.05□□□□□ -2.24
SMARCB1-208ENST00000634926 COX6B2Q6YFQ2 88 aa1.05□□□□□ -2.24
SMARCB1-208ENST00000634926 SPANXDQ9BXN6 97 aa1.05□□□□□ -2.24
SMARCB1-208ENST00000634926 TEX49A0A1B0GTD5 131 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 FXYD2P54710 66 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 NDUFA6P56556 154 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 S100A12P80511 92 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 HRCT1Q6UXD1 115 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 KTN1-AS1Q86SY8 53 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 LINC00308Q8TCZ7 52 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 CLEC2BQ92478 149 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 Q96NJ1 140 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 PRO1933Q9H354 126 aa1.04□□□□□ -2.24
SMARCB1-208ENST00000634926 TRBV7-7A0A0K0K1E9 115 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 DPM2O94777 84 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 IGKCP01834 107 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 AKR1D1P51857 326 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 S100A7L2Q5SY68 101 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 LINC01545Q5VT33 79 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 OBSCN-AS1Q96MR7 158 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 PMCHL2Q9BQD1 86 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 LAMTOR3Q9UHA4 124 aa1.03□□□□□ -2.24
SMARCB1-208ENST00000634926 C20orf202A1L168 122 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 LEPROTL1O95214 131 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 TCL1BO95988 128 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 COX7BP24311 80 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 KRTAP12-4P60329 112 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 NPC2P61916 151 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 NDUFA5Q16718 116 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 Q6Q795 121 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 SVBPQ8N300 66 aa1.02□□□□□ -2.25
SMARCB1-208ENST00000634926 ZNF815PA8K554 130 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 SYS1-DBNDD2H3BUS1 97 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 TRGC2P03986 189 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 Q6JHZ5 121 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 LINC00575Q6W349 94 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 ATP11AUNQ6ZP68 121 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 SMIM11BQ8TCY0 68 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 PPDPFLQ8WWR9 84 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 HSPB8Q9UJY1 196 aa1.01□□□□□ -2.25
SMARCB1-208ENST00000634926 HIST1H2BKO60814 126 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 APOC3P02656 99 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 HIST1H2BJP06899 126 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 IFITM1P13164 125 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 KRTAP13-4Q3LI77 160 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 LINC01554Q52M75 96 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 Q6ZQY7 126 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 LCA10Q71F78 164 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 HIST3H2BBQ8N257 126 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 DEFB105AQ8NG35 78 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 OR13C6PQ8NH95 151 aa1□□□□□ -2.25
SMARCB1-208ENST00000634926 NHP2Q9NX24 153 aaKnown RBP1□□□□□ -2.25
SMARCB1-208ENST00000634926 TRAV13-2A0A0B4J235 113 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 MT1BP07438 61 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 C3orf79P0CE67 100 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 FABP4P15090 132 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 KRTAP12-3P60328 96 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 KRTAP20-1Q3LI63 56 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 OCIAD2Q56VL3 154 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 C7orf65Q6ZTY9 151 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 MUSTN1Q8IVN3 82 aa0.99□□□□□ -2.25
SMARCB1-208ENST00000634926 TRBV20-1A0A075B6N2 111 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 hADV29S1A0JD25 119 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms