RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
FOXCUT-201ENST00000628509 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
FOXCUT-201ENST00000628509 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
FOXCUT-201ENST00000628509 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
FOXCUT-201ENST00000628509 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
FOXCUT-201ENST00000628509 MT-ATP8P03928 68 aa5.84□□□□□ -1.47
FOXCUT-201ENST00000628509 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
FOXCUT-201ENST00000628509 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
FOXCUT-201ENST00000628509 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
FOXCUT-201ENST00000628509 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
FOXCUT-201ENST00000628509 PRR15Q8IV56 129 aa5.82□□□□□ -1.48
FOXCUT-201ENST00000628509 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
FOXCUT-201ENST00000628509 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
FOXCUT-201ENST00000628509 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
FOXCUT-201ENST00000628509 DSCR10P59022 87 aa5.8□□□□□ -1.48
FOXCUT-201ENST00000628509 SMIM20Q8N5G0 67 aa5.8□□□□□ -1.48
FOXCUT-201ENST00000628509 Q96NJ1 140 aa5.8□□□□□ -1.48
FOXCUT-201ENST00000628509 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
FOXCUT-201ENST00000628509 K7EQZ3 153 aa5.79□□□□□ -1.48
FOXCUT-201ENST00000628509 RYR1P21817 5038 aa5.78□□□□□ -1.48
FOXCUT-201ENST00000628509 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
FOXCUT-201ENST00000628509 HSPG2P98160 4391 aa5.77□□□□□ -1.49
FOXCUT-201ENST00000628509 ATOX1O00244 68 aa5.77□□□□□ -1.49
FOXCUT-201ENST00000628509 LINC00313P59037 77 aa5.77□□□□□ -1.49
FOXCUT-201ENST00000628509 CASC2Q6XLA1 102 aa5.76□□□□□ -1.49
FOXCUT-201ENST00000628509 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
FOXCUT-201ENST00000628509 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
FOXCUT-201ENST00000628509 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
FOXCUT-201ENST00000628509 C8orf17Q9NRJ1 99 aa5.75□□□□□ -1.49
FOXCUT-201ENST00000628509 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
FOXCUT-201ENST00000628509 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
FOXCUT-201ENST00000628509 Q8N9L7 120 aa5.74□□□□□ -1.49
FOXCUT-201ENST00000628509 EPPK1P58107 5090 aaKnown RBP5.74□□□□□ -1.49
FOXCUT-201ENST00000628509 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
FOXCUT-201ENST00000628509 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
FOXCUT-201ENST00000628509 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
FOXCUT-201ENST00000628509 FAT1Q14517 4588 aa5.72□□□□□ -1.49
FOXCUT-201ENST00000628509 A0A087WVE0 104 aa5.72□□□□□ -1.49
FOXCUT-201ENST00000628509 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
FOXCUT-201ENST00000628509 WFDC13Q8IUB5 93 aa5.71□□□□□ -1.5
FOXCUT-201ENST00000628509 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
FOXCUT-201ENST00000628509 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
FOXCUT-201ENST00000628509 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
FOXCUT-201ENST00000628509 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
FOXCUT-201ENST00000628509 NDUFS5O43920 106 aa5.69□□□□□ -1.5
FOXCUT-201ENST00000628509 PRR4Q16378 134 aa5.69□□□□□ -1.5
FOXCUT-201ENST00000628509 RETNLBQ9BQ08 111 aa5.68□□□□□ -1.5
FOXCUT-201ENST00000628509 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
FOXCUT-201ENST00000628509 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
FOXCUT-201ENST00000628509 UQCRQO14949 82 aa5.67□□□□□ -1.5
FOXCUT-201ENST00000628509 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
FOXCUT-201ENST00000628509 MP68P56378 58 aa5.65□□□□□ -1.5
FOXCUT-201ENST00000628509 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
FOXCUT-201ENST00000628509 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
FOXCUT-201ENST00000628509 DMBT1Q9UGM3 2413 aaPredicted RBP5.64□□□□□ -1.51
FOXCUT-201ENST00000628509 H3BPC8 53 aa5.63□□□□□ -1.51
FOXCUT-201ENST00000628509 H3BS24 57 aa5.63□□□□□ -1.51
FOXCUT-201ENST00000628509 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
FOXCUT-201ENST00000628509 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
FOXCUT-201ENST00000628509 TRAV22A0A0B4J277 110 aa5.61□□□□□ -1.51
FOXCUT-201ENST00000628509 C9orf92A6NGG3 77 aa5.61□□□□□ -1.51
FOXCUT-201ENST00000628509 COX7CP15954 63 aa5.6□□□□□ -1.51
FOXCUT-201ENST00000628509 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
FOXCUT-201ENST00000628509 PCLOQ9Y6V0 5065 aa5.59□□□□□ -1.51
FOXCUT-201ENST00000628509 Q75L30 129 aa5.59□□□□□ -1.51
FOXCUT-201ENST00000628509 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.51
FOXCUT-201ENST00000628509 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
FOXCUT-201ENST00000628509 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
FOXCUT-201ENST00000628509 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
FOXCUT-201ENST00000628509 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
FOXCUT-201ENST00000628509 A8MUU9 505 aa5.57□□□□□ -1.52
FOXCUT-201ENST00000628509 H0Y9P7 68 aa5.56□□□□□ -1.52
FOXCUT-201ENST00000628509 HERC2O95714 4834 aa5.55□□□□□ -1.52
FOXCUT-201ENST00000628509 NDUFC1O43677 76 aa5.55□□□□□ -1.52
FOXCUT-201ENST00000628509 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
FOXCUT-201ENST00000628509 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
FOXCUT-201ENST00000628509 PCP4P48539 62 aa5.54□□□□□ -1.52
FOXCUT-201ENST00000628509 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
FOXCUT-201ENST00000628509 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
FOXCUT-201ENST00000628509 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
FOXCUT-201ENST00000628509 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
FOXCUT-201ENST00000628509 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
FOXCUT-201ENST00000628509 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
FOXCUT-201ENST00000628509 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
FOXCUT-201ENST00000628509 C1orf64Q8NEQ6 169 aa5.5□□□□□ -1.53
FOXCUT-201ENST00000628509 TNXBP22105 4242 aa5.5□□□□□ -1.53
FOXCUT-201ENST00000628509 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
FOXCUT-201ENST00000628509 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
FOXCUT-201ENST00000628509 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
FOXCUT-201ENST00000628509 Q5W150 140 aa5.45□□□□□ -1.54
FOXCUT-201ENST00000628509 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
FOXCUT-201ENST00000628509 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
FOXCUT-201ENST00000628509 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
FOXCUT-201ENST00000628509 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
FOXCUT-201ENST00000628509 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
FOXCUT-201ENST00000628509 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
FOXCUT-201ENST00000628509 ABCA13Q86UQ4 5058 aa5.42□□□□□ -1.54
FOXCUT-201ENST00000628509 CYP4F30PQ9H0H9 118 aa5.41□□□□□ -1.54
FOXCUT-201ENST00000628509 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
FOXCUT-201ENST00000628509 SPINK7P58062 85 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms