RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PRR26Q8N8Z3 221 aa5.8□□□□□ -1.48
SOX2-OT-244ENST00000627738 TYMSOSQ8TAI1 123 aa5.8□□□□□ -1.48
SOX2-OT-244ENST00000627738 MPLKIPQ8TAP9 179 aa5.8□□□□□ -1.48
SOX2-OT-244ENST00000627738 CD164Q04900 197 aa5.79□□□□□ -1.48
SOX2-OT-244ENST00000627738 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
SOX2-OT-244ENST00000627738 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
SOX2-OT-244ENST00000627738 BPY2O14599 106 aa5.77□□□□□ -1.49
SOX2-OT-244ENST00000627738 CXCL6P80162 114 aa5.77□□□□□ -1.49
SOX2-OT-244ENST00000627738 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
SOX2-OT-244ENST00000627738 SS18L2Q9UHA2 77 aa5.76□□□□□ -1.49
SOX2-OT-244ENST00000627738 IMUPQ9GZP8 106 aa5.75□□□□□ -1.49
SOX2-OT-244ENST00000627738 LINC00472Q9H8W2 130 aa5.75□□□□□ -1.49
SOX2-OT-244ENST00000627738 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-244ENST00000627738 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-244ENST00000627738 TNXBP22105 4242 aa5.73□□□□□ -1.49
SOX2-OT-244ENST00000627738 DSCR10P59022 87 aa5.73□□□□□ -1.49
SOX2-OT-244ENST00000627738 Q8N9L7 120 aa5.73□□□□□ -1.49
SOX2-OT-244ENST00000627738 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
SOX2-OT-244ENST00000627738 Q96NJ1 140 aa5.73□□□□□ -1.49
SOX2-OT-244ENST00000627738 A0A087WVE0 104 aa5.72□□□□□ -1.49
SOX2-OT-244ENST00000627738 HERC2O95714 4834 aa5.71□□□□□ -1.5
SOX2-OT-244ENST00000627738 SPINK1P00995 79 aa5.7□□□□□ -1.5
SOX2-OT-244ENST00000627738 IGKV4-1P06312 121 aa5.7□□□□□ -1.5
SOX2-OT-244ENST00000627738 Q5XG85 94 aa5.7□□□□□ -1.5
SOX2-OT-244ENST00000627738 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
SOX2-OT-244ENST00000627738 LIMD2Q9BT23 127 aa5.7□□□□□ -1.5
SOX2-OT-244ENST00000627738 J3KT08 172 aa5.69□□□□□ -1.5
SOX2-OT-244ENST00000627738 K7EQZ3 153 aa5.69□□□□□ -1.5
SOX2-OT-244ENST00000627738 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
SOX2-OT-244ENST00000627738 ASB16-AS1Q495Z4 193 aa5.69□□□□□ -1.5
SOX2-OT-244ENST00000627738 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
SOX2-OT-244ENST00000627738 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
SOX2-OT-244ENST00000627738 A8MWP4 228 aa5.68□□□□□ -1.5
SOX2-OT-244ENST00000627738 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
SOX2-OT-244ENST00000627738 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
SOX2-OT-244ENST00000627738 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
SOX2-OT-244ENST00000627738 NDUFB1O75438 58 aa5.65□□□□□ -1.5
SOX2-OT-244ENST00000627738 PRR15Q8IV56 129 aa5.65□□□□□ -1.5
SOX2-OT-244ENST00000627738 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
SOX2-OT-244ENST00000627738 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
SOX2-OT-244ENST00000627738 IGHV6-1A0A0B4J1U7 121 aa5.62□□□□□ -1.51
SOX2-OT-244ENST00000627738 A0A1B0GVX0 72 aa5.62□□□□□ -1.51
SOX2-OT-244ENST00000627738 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
SOX2-OT-244ENST00000627738 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
SOX2-OT-244ENST00000627738 OXTP01178 125 aa5.6□□□□□ -1.51
SOX2-OT-244ENST00000627738 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
SOX2-OT-244ENST00000627738 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-244ENST00000627738 MMP24-AS1A0A0U1RRL7 71 aa5.59□□□□□ -1.51
SOX2-OT-244ENST00000627738 ATOX1O00244 68 aa5.59□□□□□ -1.51
SOX2-OT-244ENST00000627738 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
SOX2-OT-244ENST00000627738 KRTAP29-1A8MX34 341 aaPredicted RBP5.58□□□□□ -1.52
SOX2-OT-244ENST00000627738 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
SOX2-OT-244ENST00000627738 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
SOX2-OT-244ENST00000627738 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
SOX2-OT-244ENST00000627738 ANAPC13Q9BS18 74 aa5.58□□□□□ -1.52
SOX2-OT-244ENST00000627738 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
SOX2-OT-244ENST00000627738 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
SOX2-OT-244ENST00000627738 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
SOX2-OT-244ENST00000627738 LINC00313P59037 77 aa5.55□□□□□ -1.52
SOX2-OT-244ENST00000627738 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
SOX2-OT-244ENST00000627738 SMIM20Q8N5G0 67 aa5.52□□□□□ -1.53
SOX2-OT-244ENST00000627738 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
SOX2-OT-244ENST00000627738 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
SOX2-OT-244ENST00000627738 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
SOX2-OT-244ENST00000627738 TRAV7A0A075B6U4 112 aa5.51□□□□□ -1.53
SOX2-OT-244ENST00000627738 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
SOX2-OT-244ENST00000627738 NDUFS5O43920 106 aa5.49□□□□□ -1.53
SOX2-OT-244ENST00000627738 COX7CP15954 63 aa5.49□□□□□ -1.53
SOX2-OT-244ENST00000627738 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
SOX2-OT-244ENST00000627738 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
SOX2-OT-244ENST00000627738 FP248Q71RG6 208 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-244ENST00000627738 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-244ENST00000627738 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
SOX2-OT-244ENST00000627738 UQCRQO14949 82 aa5.47□□□□□ -1.53
SOX2-OT-244ENST00000627738 IGLV7-46A0A075B6I9 117 aa5.46□□□□□ -1.54
SOX2-OT-244ENST00000627738 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
SOX2-OT-244ENST00000627738 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
SOX2-OT-244ENST00000627738 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
SOX2-OT-244ENST00000627738 PRR4Q16378 134 aa5.43□□□□□ -1.54
SOX2-OT-244ENST00000627738 C5orf47Q569G3 176 aa5.42□□□□□ -1.54
SOX2-OT-244ENST00000627738 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
SOX2-OT-244ENST00000627738 H0Y9P7 68 aa5.41□□□□□ -1.54
SOX2-OT-244ENST00000627738 MP68P56378 58 aa5.4□□□□□ -1.54
SOX2-OT-244ENST00000627738 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
SOX2-OT-244ENST00000627738 Q5W150 140 aa5.4□□□□□ -1.54
SOX2-OT-244ENST00000627738 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
SOX2-OT-244ENST00000627738 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
SOX2-OT-244ENST00000627738 A8MUU9 505 aa5.39□□□□□ -1.55
SOX2-OT-244ENST00000627738 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
SOX2-OT-244ENST00000627738 A0A0U1RQV1 116 aa5.38□□□□□ -1.55
SOX2-OT-244ENST00000627738 CYSTM1Q9H1C7 97 aa5.38□□□□□ -1.55
SOX2-OT-244ENST00000627738 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
SOX2-OT-244ENST00000627738 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
SOX2-OT-244ENST00000627738 IGKV2D-30A0A075B6S6 120 aa5.35□□□□□ -1.55
SOX2-OT-244ENST00000627738 H3BPC8 53 aa5.35□□□□□ -1.55
SOX2-OT-244ENST00000627738 Q75L30 129 aa5.35□□□□□ -1.55
SOX2-OT-244ENST00000627738 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
SOX2-OT-244ENST00000627738 ZCCHC13Q8WW36 166 aaKnown RBP5.35□□□□□ -1.55
SOX2-OT-244ENST00000627738 LPAP08519 4548 aa5.35□□□□□ -1.55
SOX2-OT-244ENST00000627738 TPRXLQ17RH7 258 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms