RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 A0A087X002 238 aa11.56□□□□□ -0.56
PCDHB11-202ENST00000624887 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
PCDHB11-202ENST00000624887 CDK2AP2O75956 126 aa11.56□□□□□ -0.56
PCDHB11-202ENST00000624887 MP68P56378 58 aa11.56□□□□□ -0.56
PCDHB11-202ENST00000624887 Q1T7F1 81 aa11.56□□□□□ -0.56
PCDHB11-202ENST00000624887 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
PCDHB11-202ENST00000624887 IGHV6-1A0A0B4J1U7 121 aa11.53□□□□□ -0.56
PCDHB11-202ENST00000624887 C1orf64Q8NEQ6 169 aa11.52□□□□□ -0.57
PCDHB11-202ENST00000624887 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
PCDHB11-202ENST00000624887 H0Y9P7 68 aa11.5□□□□□ -0.57
PCDHB11-202ENST00000624887 H3BPC8 53 aa11.5□□□□□ -0.57
PCDHB11-202ENST00000624887 KRTAP1-4P0C5Y4 121 aa11.5□□□□□ -0.57
PCDHB11-202ENST00000624887 LINC00208Q96KT6 92 aa11.48□□□□□ -0.57
PCDHB11-202ENST00000624887 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
PCDHB11-202ENST00000624887 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
PCDHB11-202ENST00000624887 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.58
PCDHB11-202ENST00000624887 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
PCDHB11-202ENST00000624887 NOTCH2NLQ7Z3S9 236 aa11.44□□□□□ -0.58
PCDHB11-202ENST00000624887 C1orf195Q5TG92 126 aa11.43□□□□□ -0.58
PCDHB11-202ENST00000624887 MRPL34Q9BQ48 92 aaKnown RBP11.43□□□□□ -0.58
PCDHB11-202ENST00000624887 SPANXA2-OT1Q8N9U9 137 aa11.39□□□□□ -0.59
PCDHB11-202ENST00000624887 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
PCDHB11-202ENST00000624887 PLA2G1BP04054 148 aaKnown RBP11.39□□□□□ -0.59
PCDHB11-202ENST00000624887 V9GYY9 64 aa11.39□□□□□ -0.59
PCDHB11-202ENST00000624887 NDUFS5O43920 106 aa11.37□□□□□ -0.59
PCDHB11-202ENST00000624887 C8orf87E5RJ46 101 aa11.35□□□□□ -0.59
PCDHB11-202ENST00000624887 LIMD2Q9BT23 127 aa11.33□□□□□ -0.6
PCDHB11-202ENST00000624887 TYMSOSQ8TAI1 123 aa11.32□□□□□ -0.6
PCDHB11-202ENST00000624887 RYR3Q15413 4870 aa11.32□□□□□ -0.6
PCDHB11-202ENST00000624887 SMR3BP02814 79 aaPredicted RBP11.29□□□□□ -0.6
PCDHB11-202ENST00000624887 C4orf48Q5BLP8 95 aa11.28□□□□□ -0.6
PCDHB11-202ENST00000624887 PRR4Q16378 134 aa11.28□□□□□ -0.6
PCDHB11-202ENST00000624887 LINC00313P59037 77 aa11.27□□□□□ -0.61
PCDHB11-202ENST00000624887 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
PCDHB11-202ENST00000624887 SPINK1P00995 79 aa11.26□□□□□ -0.61
PCDHB11-202ENST00000624887 PSPHP1O15172 72 aa11.23□□□□□ -0.61
PCDHB11-202ENST00000624887 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
PCDHB11-202ENST00000624887 KRTAP10-4P60372 401 aaPredicted RBP11.21□□□□□ -0.61
PCDHB11-202ENST00000624887 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
PCDHB11-202ENST00000624887 A8MUN3 132 aa11.19□□□□□ -0.62
PCDHB11-202ENST00000624887 Q5VV11 94 aa11.19□□□□□ -0.62
PCDHB11-202ENST00000624887 Q5W150 140 aa11.19□□□□□ -0.62
PCDHB11-202ENST00000624887 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
PCDHB11-202ENST00000624887 PCOTHQ58A44 107 aa11.18□□□□□ -0.62
PCDHB11-202ENST00000624887 Q8N9P0 234 aaPredicted RBP11.18□□□□□ -0.62
PCDHB11-202ENST00000624887 LINC00304Q8N9R0 145 aa11.17□□□□□ -0.62
PCDHB11-202ENST00000624887 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
PCDHB11-202ENST00000624887 LOC101927531A0A1B0GV80 90 aa11.16□□□□□ -0.62
PCDHB11-202ENST00000624887 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
PCDHB11-202ENST00000624887 KRTAP16-1A8MUX0 517 aa11.15□□□□□ -0.62
PCDHB11-202ENST00000624887 PMAIP1Q13794 54 aa11.15□□□□□ -0.62
PCDHB11-202ENST00000624887 FAT1Q14517 4588 aa11.14□□□□□ -0.63
PCDHB11-202ENST00000624887 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
PCDHB11-202ENST00000624887 SEC61GP60059 68 aa11.08□□□□□ -0.64
PCDHB11-202ENST00000624887 Q75L30 129 aa11.07□□□□□ -0.64
PCDHB11-202ENST00000624887 COA5Q86WW8 74 aa11.06□□□□□ -0.64
PCDHB11-202ENST00000624887 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
PCDHB11-202ENST00000624887 PKHD1L1Q86WI1 4243 aa11.03□□□□□ -0.64
PCDHB11-202ENST00000624887 CHKB-CPT1BH3BT56 60 aa11.03□□□□□ -0.64
PCDHB11-202ENST00000624887 HSPG2P98160 4391 aa11□□□□□ -0.65
PCDHB11-202ENST00000624887 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
PCDHB11-202ENST00000624887 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
PCDHB11-202ENST00000624887 A8MU10 97 aa10.96□□□□□ -0.66
PCDHB11-202ENST00000624887 Q5VSD8 79 aa10.96□□□□□ -0.66
PCDHB11-202ENST00000624887 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.66
PCDHB11-202ENST00000624887 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
PCDHB11-202ENST00000624887 RYR1P21817 5038 aa10.95□□□□□ -0.66
PCDHB11-202ENST00000624887 LCA10Q71F78 164 aa10.91□□□□□ -0.66
PCDHB11-202ENST00000624887 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
PCDHB11-202ENST00000624887 HRES1P13985 223 aa10.9□□□□□ -0.66
PCDHB11-202ENST00000624887 CDC42SE1Q9NRR8 79 aa10.9□□□□□ -0.66
PCDHB11-202ENST00000624887 A6NED7 52 aa10.88□□□□□ -0.67
PCDHB11-202ENST00000624887 KTN1-AS1Q86SY8 53 aa10.88□□□□□ -0.67
PCDHB11-202ENST00000624887 KRTAP17-1Q9BYP8 105 aa10.86□□□□□ -0.67
PCDHB11-202ENST00000624887 KIAA1109Q2LD37 5005 aa10.84□□□□□ -0.67
PCDHB11-202ENST00000624887 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
PCDHB11-202ENST00000624887 DMAC1Q96GE9 116 aa10.83□□□□□ -0.68
PCDHB11-202ENST00000624887 A6NN06 94 aa10.82□□□□□ -0.68
PCDHB11-202ENST00000624887 ACYP2P14621 99 aa10.81□□□□□ -0.68
PCDHB11-202ENST00000624887 Q8N1X5 172 aa10.81□□□□□ -0.68
PCDHB11-202ENST00000624887 C9orf92A6NGG3 77 aa10.79□□□□□ -0.68
PCDHB11-202ENST00000624887 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
PCDHB11-202ENST00000624887 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
PCDHB11-202ENST00000624887 FLG2Q5D862 2391 aaPredicted RBP10.78□□□□□ -0.68
PCDHB11-202ENST00000624887 A8MUU9 505 aa10.77□□□□□ -0.68
PCDHB11-202ENST00000624887 SPTSSBQ8NFR3 76 aa10.77□□□□□ -0.68
PCDHB11-202ENST00000624887 TNXBP22105 4242 aa10.75□□□□□ -0.69
PCDHB11-202ENST00000624887 C7orf65Q6ZTY9 151 aa10.74□□□□□ -0.69
PCDHB11-202ENST00000624887 LRP1Q07954 4544 aaKnown RBP10.73□□□□□ -0.69
PCDHB11-202ENST00000624887 SPINK7P58062 85 aa10.67□□□□□ -0.7
PCDHB11-202ENST00000624887 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
PCDHB11-202ENST00000624887 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
PCDHB11-202ENST00000624887 KRTAP4-5Q9BYR2 181 aa10.56□□□□□ -0.72
PCDHB11-202ENST00000624887 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
PCDHB11-202ENST00000624887 MYCBP2O75592 4640 aa10.51□□□□□ -0.73
PCDHB11-202ENST00000624887 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
PCDHB11-202ENST00000624887 BIRC6Q9NR09 4857 aa10.48□□□□□ -0.73
PCDHB11-202ENST00000624887 RPL37P61927 97 aaKnown RBP10.41□□□□□ -0.74
PCDHB11-202ENST00000624887 SPATA8Q6RVD6 105 aa10.41□□□□□ -0.74
PCDHB11-202ENST00000624887 A0A1B0GU69 56 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms