RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
ATRX-216ENST00000624403 IGKV4-1P06312 121 aa6.04□□□□□ -1.44
ATRX-216ENST00000624403 DSCR10P59022 87 aa6.04□□□□□ -1.44
ATRX-216ENST00000624403 CD164Q04900 197 aa6.04□□□□□ -1.44
ATRX-216ENST00000624403 DEFB116Q30KQ4 102 aa6.04□□□□□ -1.44
ATRX-216ENST00000624403 LINC00472Q9H8W2 130 aa6.03□□□□□ -1.44
ATRX-216ENST00000624403 SS18L2Q9UHA2 77 aa6.02□□□□□ -1.45
ATRX-216ENST00000624403 K7EQZ3 153 aa6□□□□□ -1.45
ATRX-216ENST00000624403 PRR26Q8N8Z3 221 aa6□□□□□ -1.45
ATRX-216ENST00000624403 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
ATRX-216ENST00000624403 Q96NJ1 140 aa6□□□□□ -1.45
ATRX-216ENST00000624403 ANAPC13Q9BS18 74 aa6□□□□□ -1.45
ATRX-216ENST00000624403 J3KT08 172 aa5.99□□□□□ -1.45
ATRX-216ENST00000624403 RYR1P21817 5038 aa5.98□□□□□ -1.45
ATRX-216ENST00000624403 Q5VSD8 79 aa5.98□□□□□ -1.45
ATRX-216ENST00000624403 FAT1Q14517 4588 aa5.98□□□□□ -1.45
ATRX-216ENST00000624403 A8MWP4 228 aa5.97□□□□□ -1.45
ATRX-216ENST00000624403 ATOX1O00244 68 aa5.97□□□□□ -1.45
ATRX-216ENST00000624403 PKHD1L1Q86WI1 4243 aa5.95□□□□□ -1.46
ATRX-216ENST00000624403 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
ATRX-216ENST00000624403 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
ATRX-216ENST00000624403 HSPG2P98160 4391 aa5.95□□□□□ -1.46
ATRX-216ENST00000624403 Q5XG85 94 aa5.94□□□□□ -1.46
ATRX-216ENST00000624403 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
ATRX-216ENST00000624403 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
ATRX-216ENST00000624403 HCG22E2RYF7 251 aa5.92□□□□□ -1.46
ATRX-216ENST00000624403 NDUFB1O75438 58 aa5.92□□□□□ -1.46
ATRX-216ENST00000624403 LIMD2Q9BT23 127 aa5.92□□□□□ -1.46
ATRX-216ENST00000624403 SPINK1P00995 79 aa5.91□□□□□ -1.46
ATRX-216ENST00000624403 C1orf195Q5TG92 126 aa5.91□□□□□ -1.46
ATRX-216ENST00000624403 SPAG11AQ6PDA7 123 aa5.91□□□□□ -1.46
ATRX-216ENST00000624403 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
ATRX-216ENST00000624403 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
ATRX-216ENST00000624403 SERP2Q8N6R1 65 aa5.9□□□□□ -1.46
ATRX-216ENST00000624403 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
ATRX-216ENST00000624403 IGHV6-1A0A0B4J1U7 121 aa5.89□□□□□ -1.47
ATRX-216ENST00000624403 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
ATRX-216ENST00000624403 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
ATRX-216ENST00000624403 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
ATRX-216ENST00000624403 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
ATRX-216ENST00000624403 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
ATRX-216ENST00000624403 COX7CP15954 63 aa5.88□□□□□ -1.47
ATRX-216ENST00000624403 RPS29P62273 56 aaKnown RBP5.88□□□□□ -1.47
ATRX-216ENST00000624403 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
ATRX-216ENST00000624403 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
ATRX-216ENST00000624403 UQCRQO14949 82 aa5.86□□□□□ -1.47
ATRX-216ENST00000624403 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
ATRX-216ENST00000624403 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
ATRX-216ENST00000624403 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
ATRX-216ENST00000624403 hDV103S1A0JD37 113 aa5.84□□□□□ -1.47
ATRX-216ENST00000624403 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
ATRX-216ENST00000624403 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
ATRX-216ENST00000624403 LINC00313P59037 77 aa5.79□□□□□ -1.48
ATRX-216ENST00000624403 C20orf197Q8N268 126 aa5.79□□□□□ -1.48
ATRX-216ENST00000624403 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
ATRX-216ENST00000624403 MT1HL1P0DM35 61 aa5.77□□□□□ -1.49
ATRX-216ENST00000624403 RETNLBQ9BQ08 111 aa5.76□□□□□ -1.49
ATRX-216ENST00000624403 CYSTM1Q9H1C7 97 aa5.76□□□□□ -1.49
ATRX-216ENST00000624403 BIRC6Q9NR09 4857 aa5.76□□□□□ -1.49
ATRX-216ENST00000624403 A0A0U1RQV1 116 aa5.75□□□□□ -1.49
ATRX-216ENST00000624403 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
ATRX-216ENST00000624403 NDUFS5O43920 106 aa5.75□□□□□ -1.49
ATRX-216ENST00000624403 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
ATRX-216ENST00000624403 TNXBP22105 4242 aa5.75□□□□□ -1.49
ATRX-216ENST00000624403 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
ATRX-216ENST00000624403 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
ATRX-216ENST00000624403 TP53AIP1Q9HCN2 124 aa5.74□□□□□ -1.49
ATRX-216ENST00000624403 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
ATRX-216ENST00000624403 OXTP01178 125 aa5.73□□□□□ -1.49
ATRX-216ENST00000624403 KLKP1Q107X0 134 aa5.73□□□□□ -1.49
ATRX-216ENST00000624403 H0Y9P7 68 aa5.72□□□□□ -1.49
ATRX-216ENST00000624403 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.5
ATRX-216ENST00000624403 Q8N9P0 234 aaPredicted RBP5.71□□□□□ -1.5
ATRX-216ENST00000624403 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
ATRX-216ENST00000624403 MP68P56378 58 aa5.7□□□□□ -1.5
ATRX-216ENST00000624403 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
ATRX-216ENST00000624403 C9orf92A6NGG3 77 aa5.68□□□□□ -1.5
ATRX-216ENST00000624403 LINC00208Q96KT6 92 aa5.68□□□□□ -1.5
ATRX-216ENST00000624403 HERC2O95714 4834 aa5.68□□□□□ -1.5
ATRX-216ENST00000624403 H3BPC8 53 aa5.67□□□□□ -1.5
ATRX-216ENST00000624403 H7BZZ5 65 aa5.67□□□□□ -1.5
ATRX-216ENST00000624403 Q5W150 140 aa5.67□□□□□ -1.5
ATRX-216ENST00000624403 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
ATRX-216ENST00000624403 NDUFC1O43677 76 aa5.66□□□□□ -1.5
ATRX-216ENST00000624403 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
ATRX-216ENST00000624403 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
ATRX-216ENST00000624403 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
ATRX-216ENST00000624403 TMEM258P61165 79 aa5.64□□□□□ -1.51
ATRX-216ENST00000624403 IGLV7-46A0A075B6I9 117 aa5.63□□□□□ -1.51
ATRX-216ENST00000624403 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
ATRX-216ENST00000624403 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
ATRX-216ENST00000624403 A8MUU9 505 aa5.61□□□□□ -1.51
ATRX-216ENST00000624403 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
ATRX-216ENST00000624403 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
ATRX-216ENST00000624403 LOC101927531A0A1B0GV80 90 aa5.59□□□□□ -1.51
ATRX-216ENST00000624403 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
ATRX-216ENST00000624403 PRR4Q16378 134 aa5.59□□□□□ -1.51
ATRX-216ENST00000624403 IGKV2-30P06310 120 aa5.57□□□□□ -1.52
ATRX-216ENST00000624403 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
ATRX-216ENST00000624403 Q75L30 129 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms