RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CSMD2Q7Z408 3487 aa7.1□□□□□ -1.27
ATRX-214ENST00000624166 PLAC8Q9NZF1 115 aa7.09□□□□□ -1.27
ATRX-214ENST00000624166 A8MU10 97 aa7.08□□□□□ -1.28
ATRX-214ENST00000624166 Q8N1X5 172 aa7.07□□□□□ -1.28
ATRX-214ENST00000624166 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 LINC00304Q8N9R0 145 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 PDZD2O15018 2839 aa7.03□□□□□ -1.28
ATRX-214ENST00000624166 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
ATRX-214ENST00000624166 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
ATRX-214ENST00000624166 A0A1B0GU33 70 aa7.01□□□□□ -1.29
ATRX-214ENST00000624166 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
ATRX-214ENST00000624166 CUBNO60494 3623 aa7□□□□□ -1.29
ATRX-214ENST00000624166 A0A087X002 238 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 H3BS24 57 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 PANO1I0J062 215 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
ATRX-214ENST00000624166 TENM1Q9UKZ4 2725 aa6.95□□□□□ -1.3
ATRX-214ENST00000624166 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
ATRX-214ENST00000624166 ZFHX3Q15911 3703 aa6.94□□□□□ -1.3
ATRX-214ENST00000624166 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
ATRX-214ENST00000624166 VWFP04275 2813 aa6.89□□□□□ -1.31
ATRX-214ENST00000624166 STAB2Q8WWQ8 2551 aa6.86□□□□□ -1.31
ATRX-214ENST00000624166 FBN1P35555 2871 aaKnown RBP6.85□□□□□ -1.31
ATRX-214ENST00000624166 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
ATRX-214ENST00000624166 VPS13CQ709C8 3753 aa6.83□□□□□ -1.32
ATRX-214ENST00000624166 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
ATRX-214ENST00000624166 A0A0D9SG42 100 aa6.81□□□□□ -1.32
ATRX-214ENST00000624166 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
ATRX-214ENST00000624166 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
ATRX-214ENST00000624166 ROMO1P60602 79 aa6.73□□□□□ -1.33
ATRX-214ENST00000624166 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
ATRX-214ENST00000624166 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
ATRX-214ENST00000624166 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
ATRX-214ENST00000624166 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
ATRX-214ENST00000624166 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
ATRX-214ENST00000624166 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
ATRX-214ENST00000624166 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
ATRX-214ENST00000624166 KRTAP13-2Q52LG2 175 aa6.66□□□□□ -1.34
ATRX-214ENST00000624166 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
ATRX-214ENST00000624166 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
ATRX-214ENST00000624166 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
ATRX-214ENST00000624166 S4R3F8 94 aa6.62□□□□□ -1.35
ATRX-214ENST00000624166 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
ATRX-214ENST00000624166 ANK3Q12955 4377 aaKnown RBP6.59□□□□□ -1.35
ATRX-214ENST00000624166 KRTAP13-3Q3SY46 172 aa6.59□□□□□ -1.36
ATRX-214ENST00000624166 Q6ZSA8 131 aa6.55□□□□□ -1.36
ATRX-214ENST00000624166 A8MUU9 505 aa6.53□□□□□ -1.36
ATRX-214ENST00000624166 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
ATRX-214ENST00000624166 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
ATRX-214ENST00000624166 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
ATRX-214ENST00000624166 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
ATRX-214ENST00000624166 TGP01266 2768 aa6.49□□□□□ -1.37
ATRX-214ENST00000624166 H0YAA0 97 aa6.47□□□□□ -1.37
ATRX-214ENST00000624166 C20orf166-AS1Q96NR2 134 aa6.46□□□□□ -1.38
ATRX-214ENST00000624166 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
ATRX-214ENST00000624166 AKAP9Q99996 3911 aa6.41□□□□□ -1.38
ATRX-214ENST00000624166 R4GN34 69 aa6.38□□□□□ -1.39
ATRX-214ENST00000624166 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
ATRX-214ENST00000624166 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
ATRX-214ENST00000624166 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
ATRX-214ENST00000624166 M0QZ58 72 aa6.33□□□□□ -1.4
ATRX-214ENST00000624166 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
ATRX-214ENST00000624166 Q5VSD8 79 aa6.24□□□□□ -1.41
ATRX-214ENST00000624166 J3QL48 77 aa6.22□□□□□ -1.41
ATRX-214ENST00000624166 FBN3Q75N90 2809 aa6.21□□□□□ -1.42
ATRX-214ENST00000624166 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
ATRX-214ENST00000624166 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
ATRX-214ENST00000624166 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
ATRX-214ENST00000624166 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
ATRX-214ENST00000624166 P0C880 135 aa6.1□□□□□ -1.43
ATRX-214ENST00000624166 COL7A1Q02388 2944 aa6.09□□□□□ -1.44
ATRX-214ENST00000624166 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
ATRX-214ENST00000624166 XP32Q5T750 250 aa6.07□□□□□ -1.44
ATRX-214ENST00000624166 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
ATRX-214ENST00000624166 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
ATRX-214ENST00000624166 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
ATRX-214ENST00000624166 HUWE1Q7Z6Z7 4374 aaKnown RBP5.98□□□□□ -1.45
ATRX-214ENST00000624166 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.45
ATRX-214ENST00000624166 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
ATRX-214ENST00000624166 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
ATRX-214ENST00000624166 DNHD1Q96M86 4753 aa5.9□□□□□ -1.46
ATRX-214ENST00000624166 KRTAP12-1P59990 96 aa5.9□□□□□ -1.47
ATRX-214ENST00000624166 TNP1P09430 55 aa5.89□□□□□ -1.47
ATRX-214ENST00000624166 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
ATRX-214ENST00000624166 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
ATRX-214ENST00000624166 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
ATRX-214ENST00000624166 M0R2T5 61 aa5.84□□□□□ -1.47
ATRX-214ENST00000624166 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
ATRX-214ENST00000624166 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
ATRX-214ENST00000624166 ANK2Q01484 3957 aa5.78□□□□□ -1.48
ATRX-214ENST00000624166 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
ATRX-214ENST00000624166 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
ATRX-214ENST00000624166 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
ATRX-214ENST00000624166 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
ATRX-214ENST00000624166 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
ATRX-214ENST00000624166 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
ATRX-214ENST00000624166 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms