RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
PCDHB12-202ENST00000622978 LINC00208Q96KT6 92 aa11.74□□□□□ -0.53
PCDHB12-202ENST00000622978 hDV103S1A0JD37 113 aa11.74□□□□□ -0.53
PCDHB12-202ENST00000622978 H0Y9P7 68 aa11.74□□□□□ -0.53
PCDHB12-202ENST00000622978 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
PCDHB12-202ENST00000622978 FP248Q71RG6 208 aaPredicted RBP11.72□□□□□ -0.53
PCDHB12-202ENST00000622978 VPS13BQ7Z7G8 4022 aa11.71□□□□□ -0.53
PCDHB12-202ENST00000622978 A0A1B0GVX0 72 aa11.71□□□□□ -0.54
PCDHB12-202ENST00000622978 ASB16-AS1Q495Z4 193 aa11.71□□□□□ -0.54
PCDHB12-202ENST00000622978 TRAV22A0A0B4J277 110 aa11.69□□□□□ -0.54
PCDHB12-202ENST00000622978 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
PCDHB12-202ENST00000622978 H3BPC8 53 aa11.68□□□□□ -0.54
PCDHB12-202ENST00000622978 C8orf17Q9NRJ1 99 aa11.68□□□□□ -0.54
PCDHB12-202ENST00000622978 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
PCDHB12-202ENST00000622978 TYMSOSQ8TAI1 123 aa11.65□□□□□ -0.54
PCDHB12-202ENST00000622978 PRR4Q16378 134 aa11.64□□□□□ -0.55
PCDHB12-202ENST00000622978 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
PCDHB12-202ENST00000622978 CYP4F30PQ9H0H9 118 aa11.62□□□□□ -0.55
PCDHB12-202ENST00000622978 KRTAP10-4P60372 401 aaPredicted RBP11.61□□□□□ -0.55
PCDHB12-202ENST00000622978 LIMD2Q9BT23 127 aa11.61□□□□□ -0.55
PCDHB12-202ENST00000622978 C4orf48Q5BLP8 95 aa11.59□□□□□ -0.55
PCDHB12-202ENST00000622978 TP53AIP1Q9HCN2 124 aa11.59□□□□□ -0.55
PCDHB12-202ENST00000622978 RYR3Q15413 4870 aa11.59□□□□□ -0.55
PCDHB12-202ENST00000622978 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
PCDHB12-202ENST00000622978 C1orf195Q5TG92 126 aa11.56□□□□□ -0.56
PCDHB12-202ENST00000622978 NOTCH2NLQ7Z3S9 236 aa11.56□□□□□ -0.56
PCDHB12-202ENST00000622978 MPLKIPQ8TAP9 179 aa11.56□□□□□ -0.56
PCDHB12-202ENST00000622978 NDUFS5O43920 106 aa11.56□□□□□ -0.56
PCDHB12-202ENST00000622978 SPINK1P00995 79 aa11.55□□□□□ -0.56
PCDHB12-202ENST00000622978 MRPL34Q9BQ48 92 aaKnown RBP11.55□□□□□ -0.56
PCDHB12-202ENST00000622978 SPANXA2-OT1Q8N9U9 137 aa11.54□□□□□ -0.56
PCDHB12-202ENST00000622978 FAT1Q14517 4588 aa11.54□□□□□ -0.56
PCDHB12-202ENST00000622978 C8orf87E5RJ46 101 aa11.51□□□□□ -0.57
PCDHB12-202ENST00000622978 LINC00304Q8N9R0 145 aa11.51□□□□□ -0.57
PCDHB12-202ENST00000622978 SPAG11AQ6PDA7 123 aa11.48□□□□□ -0.57
PCDHB12-202ENST00000622978 RPS29P62273 56 aaKnown RBP11.47□□□□□ -0.57
PCDHB12-202ENST00000622978 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
PCDHB12-202ENST00000622978 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
PCDHB12-202ENST00000622978 LINC00313P59037 77 aa11.44□□□□□ -0.58
PCDHB12-202ENST00000622978 IGLV7-46A0A075B6I9 117 aa11.4□□□□□ -0.58
PCDHB12-202ENST00000622978 Q1T7F1 81 aa11.39□□□□□ -0.59
PCDHB12-202ENST00000622978 Q5VSD8 79 aa11.36□□□□□ -0.59
PCDHB12-202ENST00000622978 Q5W150 140 aa11.34□□□□□ -0.59
PCDHB12-202ENST00000622978 HSPG2P98160 4391 aa11.33□□□□□ -0.6
PCDHB12-202ENST00000622978 Q8N9P0 234 aaPredicted RBP11.31□□□□□ -0.6
PCDHB12-202ENST00000622978 KRTAP16-1A8MUX0 517 aa11.31□□□□□ -0.6
PCDHB12-202ENST00000622978 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
PCDHB12-202ENST00000622978 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
PCDHB12-202ENST00000622978 COA5Q86WW8 74 aa11.29□□□□□ -0.6
PCDHB12-202ENST00000622978 PRO0628Q9UI54 55 aa11.27□□□□□ -0.61
PCDHB12-202ENST00000622978 PSPHP1O15172 72 aa11.26□□□□□ -0.61
PCDHB12-202ENST00000622978 BRK1Q8WUW1 75 aa11.26□□□□□ -0.61
PCDHB12-202ENST00000622978 V9GYY9 64 aa11.26□□□□□ -0.61
PCDHB12-202ENST00000622978 RYR1P21817 5038 aa11.24□□□□□ -0.61
PCDHB12-202ENST00000622978 PKHD1L1Q86WI1 4243 aa11.23□□□□□ -0.61
PCDHB12-202ENST00000622978 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
PCDHB12-202ENST00000622978 A8MUN3 132 aa11.18□□□□□ -0.62
PCDHB12-202ENST00000622978 RETNLBQ9BQ08 111 aa11.18□□□□□ -0.62
PCDHB12-202ENST00000622978 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
PCDHB12-202ENST00000622978 HRES1P13985 223 aa11.16□□□□□ -0.62
PCDHB12-202ENST00000622978 KRTAP10-8P60410 259 aa11.16□□□□□ -0.62
PCDHB12-202ENST00000622978 Q8N1X5 172 aa11.15□□□□□ -0.62
PCDHB12-202ENST00000622978 KIAA1109Q2LD37 5005 aa11.15□□□□□ -0.62
PCDHB12-202ENST00000622978 Q5VV11 94 aa11.1□□□□□ -0.63
PCDHB12-202ENST00000622978 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
PCDHB12-202ENST00000622978 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
PCDHB12-202ENST00000622978 C9orf92A6NGG3 77 aa11.08□□□□□ -0.64
PCDHB12-202ENST00000622978 IGKV2-30P06310 120 aa11.07□□□□□ -0.64
PCDHB12-202ENST00000622978 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
PCDHB12-202ENST00000622978 ACYP2P14621 99 aa11.02□□□□□ -0.65
PCDHB12-202ENST00000622978 TNXBP22105 4242 aa11.01□□□□□ -0.65
PCDHB12-202ENST00000622978 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
PCDHB12-202ENST00000622978 C20orf166-AS1Q96NR2 134 aa11□□□□□ -0.65
PCDHB12-202ENST00000622978 DMAC1Q96GE9 116 aa10.99□□□□□ -0.65
PCDHB12-202ENST00000622978 LINC01558Q9Y6Z2 57 aa10.99□□□□□ -0.65
PCDHB12-202ENST00000622978 A8MUU9 505 aa10.99□□□□□ -0.65
PCDHB12-202ENST00000622978 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
PCDHB12-202ENST00000622978 IGKV2D-30A0A075B6S6 120 aa10.97□□□□□ -0.65
PCDHB12-202ENST00000622978 Q75L30 129 aa10.96□□□□□ -0.65
PCDHB12-202ENST00000622978 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
PCDHB12-202ENST00000622978 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
PCDHB12-202ENST00000622978 A8MU10 97 aa10.87□□□□□ -0.67
PCDHB12-202ENST00000622978 DMBT1Q9UGM3 2413 aaPredicted RBP10.86□□□□□ -0.67
PCDHB12-202ENST00000622978 A6NED7 52 aa10.86□□□□□ -0.67
PCDHB12-202ENST00000622978 MYCBP2O75592 4640 aa10.84□□□□□ -0.67
PCDHB12-202ENST00000622978 KRTAP4-5Q9BYR2 181 aa10.82□□□□□ -0.68
PCDHB12-202ENST00000622978 LCA10Q71F78 164 aa10.78□□□□□ -0.68
PCDHB12-202ENST00000622978 SEC61GP60059 68 aa10.76□□□□□ -0.69
PCDHB12-202ENST00000622978 SPINK7P58062 85 aa10.74□□□□□ -0.69
PCDHB12-202ENST00000622978 CDC42SE1Q9NRR8 79 aa10.72□□□□□ -0.69
PCDHB12-202ENST00000622978 XP32Q5T750 250 aa10.71□□□□□ -0.69
PCDHB12-202ENST00000622978 ATP11AUNQ6ZP68 121 aa10.7□□□□□ -0.7
PCDHB12-202ENST00000622978 RPL37P61927 97 aaKnown RBP10.7□□□□□ -0.7
PCDHB12-202ENST00000622978 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
PCDHB12-202ENST00000622978 A0A1B0GU69 56 aa10.66□□□□□ -0.7
PCDHB12-202ENST00000622978 PMAIP1Q13794 54 aa10.64□□□□□ -0.71
PCDHB12-202ENST00000622978 BIRC6Q9NR09 4857 aa10.64□□□□□ -0.71
PCDHB12-202ENST00000622978 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
PCDHB12-202ENST00000622978 HERC2O95714 4834 aa10.57□□□□□ -0.72
PCDHB12-202ENST00000622978 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms