RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.52
PDPN-212ENST00000621990 HYDINQ4G0P3 5121 aa5.57□□□□□ -1.52
PDPN-212ENST00000621990 H3BS24 57 aa5.57□□□□□ -1.52
PDPN-212ENST00000621990 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
PDPN-212ENST00000621990 CD164Q04900 197 aa5.57□□□□□ -1.52
PDPN-212ENST00000621990 Q6ZSA8 131 aa5.56□□□□□ -1.52
PDPN-212ENST00000621990 CIRBP-AS1Q8TBR5 109 aa5.56□□□□□ -1.52
PDPN-212ENST00000621990 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
PDPN-212ENST00000621990 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
PDPN-212ENST00000621990 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
PDPN-212ENST00000621990 Q1T7F1 81 aa5.54□□□□□ -1.52
PDPN-212ENST00000621990 CDK2AP2O75956 126 aa5.54□□□□□ -1.52
PDPN-212ENST00000621990 SSBP3-AS1Q7Z2R9 100 aa5.54□□□□□ -1.52
PDPN-212ENST00000621990 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
PDPN-212ENST00000621990 PRR4Q16378 134 aa5.54□□□□□ -1.52
PDPN-212ENST00000621990 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
PDPN-212ENST00000621990 A0A087X002 238 aa5.52□□□□□ -1.53
PDPN-212ENST00000621990 NOTCH2NLQ7Z3S9 236 aa5.52□□□□□ -1.53
PDPN-212ENST00000621990 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
PDPN-212ENST00000621990 VPS13BQ7Z7G8 4022 aa5.51□□□□□ -1.53
PDPN-212ENST00000621990 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
PDPN-212ENST00000621990 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
PDPN-212ENST00000621990 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
PDPN-212ENST00000621990 KRTAP13-2Q52LG2 175 aa5.48□□□□□ -1.53
PDPN-212ENST00000621990 FAM229AH3BQW9 127 aa5.47□□□□□ -1.53
PDPN-212ENST00000621990 NDUFS5O43920 106 aa5.47□□□□□ -1.53
PDPN-212ENST00000621990 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
PDPN-212ENST00000621990 SPINK6Q6UWN8 80 aa5.46□□□□□ -1.54
PDPN-212ENST00000621990 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
PDPN-212ENST00000621990 PKHD1P08F94 4074 aa5.44□□□□□ -1.54
PDPN-212ENST00000621990 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
PDPN-212ENST00000621990 SACSQ9NZJ4 4579 aa5.44□□□□□ -1.54
PDPN-212ENST00000621990 LOC101927531A0A1B0GV80 90 aa5.44□□□□□ -1.54
PDPN-212ENST00000621990 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
PDPN-212ENST00000621990 Q5W150 140 aa5.43□□□□□ -1.54
PDPN-212ENST00000621990 COA5Q86WW8 74 aa5.43□□□□□ -1.54
PDPN-212ENST00000621990 Q8N9P0 234 aaPredicted RBP5.43□□□□□ -1.54
PDPN-212ENST00000621990 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
PDPN-212ENST00000621990 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
PDPN-212ENST00000621990 LINC00313P59037 77 aa5.4□□□□□ -1.54
PDPN-212ENST00000621990 PSPHP1O15172 72 aa5.4□□□□□ -1.55
PDPN-212ENST00000621990 LIMD2Q9BT23 127 aa5.4□□□□□ -1.55
PDPN-212ENST00000621990 A8MUN3 132 aa5.38□□□□□ -1.55
PDPN-212ENST00000621990 KRTAP16-1A8MUX0 517 aa5.38□□□□□ -1.55
PDPN-212ENST00000621990 Q5VV11 94 aa5.38□□□□□ -1.55
PDPN-212ENST00000621990 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
PDPN-212ENST00000621990 HRES1P13985 223 aa5.37□□□□□ -1.55
PDPN-212ENST00000621990 DYNC1H1Q14204 4646 aaKnown RBP5.35□□□□□ -1.55
PDPN-212ENST00000621990 PLA2G1BP04054 148 aaKnown RBP5.35□□□□□ -1.55
PDPN-212ENST00000621990 SPINK1P00995 79 aa5.34□□□□□ -1.55
PDPN-212ENST00000621990 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
PDPN-212ENST00000621990 IGKV2-30P06310 120 aa5.32□□□□□ -1.56
PDPN-212ENST00000621990 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
PDPN-212ENST00000621990 Q75L30 129 aa5.32□□□□□ -1.56
PDPN-212ENST00000621990 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
PDPN-212ENST00000621990 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
PDPN-212ENST00000621990 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
PDPN-212ENST00000621990 APOBP04114 4563 aaKnown RBP5.31□□□□□ -1.56
PDPN-212ENST00000621990 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
PDPN-212ENST00000621990 ACYP2P14621 99 aa5.29□□□□□ -1.56
PDPN-212ENST00000621990 A0A1B0GVY2 172 aa5.29□□□□□ -1.56
PDPN-212ENST00000621990 SPAG11AQ6PDA7 123 aa5.29□□□□□ -1.56
PDPN-212ENST00000621990 CHKB-CPT1BH3BT56 60 aa5.28□□□□□ -1.56
PDPN-212ENST00000621990 RYR2Q92736 4967 aa5.27□□□□□ -1.57
PDPN-212ENST00000621990 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
PDPN-212ENST00000621990 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
PDPN-212ENST00000621990 FAT1Q14517 4588 aa5.26□□□□□ -1.57
PDPN-212ENST00000621990 RETNLBQ9BQ08 111 aa5.25□□□□□ -1.57
PDPN-212ENST00000621990 A8MU10 97 aa5.24□□□□□ -1.57
PDPN-212ENST00000621990 RBM12B-AS1Q9P1G2 102 aa5.24□□□□□ -1.57
PDPN-212ENST00000621990 LCA10Q71F78 164 aa5.22□□□□□ -1.57
PDPN-212ENST00000621990 A6NED7 52 aa5.21□□□□□ -1.58
PDPN-212ENST00000621990 SMR3BP02814 79 aaPredicted RBP5.21□□□□□ -1.58
PDPN-212ENST00000621990 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
PDPN-212ENST00000621990 KMT2CQ8NEZ4 4911 aaKnown RBP5.2□□□□□ -1.58
PDPN-212ENST00000621990 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
PDPN-212ENST00000621990 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
PDPN-212ENST00000621990 SPINK7P58062 85 aa5.17□□□□□ -1.58
PDPN-212ENST00000621990 C7orf65Q6ZTY9 151 aa5.17□□□□□ -1.58
PDPN-212ENST00000621990 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
PDPN-212ENST00000621990 A8MUU9 505 aa5.16□□□□□ -1.58
PDPN-212ENST00000621990 TNXBP22105 4242 aa5.13□□□□□ -1.59
PDPN-212ENST00000621990 A0A1B0GU69 56 aa5.11□□□□□ -1.59
PDPN-212ENST00000621990 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
PDPN-212ENST00000621990 SPTSSBQ8NFR3 76 aa5.1□□□□□ -1.59
PDPN-212ENST00000621990 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
PDPN-212ENST00000621990 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
PDPN-212ENST00000621990 A6NN06 94 aa5.1□□□□□ -1.59
PDPN-212ENST00000621990 HSPG2P98160 4391 aa5.09□□□□□ -1.59
PDPN-212ENST00000621990 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
PDPN-212ENST00000621990 Q8N1X5 172 aa5.07□□□□□ -1.6
PDPN-212ENST00000621990 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
PDPN-212ENST00000621990 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
PDPN-212ENST00000621990 RYR3Q15413 4870 aa5.04□□□□□ -1.6
PDPN-212ENST00000621990 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
PDPN-212ENST00000621990 RYR1P21817 5038 aa5.03□□□□□ -1.6
PDPN-212ENST00000621990 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
PDPN-212ENST00000621990 UQCR11O14957 56 aa5.02□□□□□ -1.61
PDPN-212ENST00000621990 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
PDPN-212ENST00000621990 Q5VSD8 79 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms