RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 HSPB8Q9UJY1 196 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 TRAPPC1Q9Y5R8 145 aa0.91□□□□□ -2.26
CPNE3-211ENST00000621526 H3BUT2 72 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 HSBP1O75506 76 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 SERF1AO75920 110 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 SNCGO76070 127 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 APOC3P02656 99 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 IFITM1P13164 125 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 PDE6GP18545 87 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 S100A1P23297 94 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 NDUFV3P56181 108 aaKnown RBP0.9□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 C2orf91Q6ZV80 131 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 C18orf32Q8TCD1 76 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 SMIM11BQ8TCY0 68 aa0.9□□□□□ -2.27
CPNE3-211ENST00000621526 E9PLD3 99 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 H3BMG7 143 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 J3KT08 172 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 K7EQZ3 153 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 TRGC2P03986 189 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 PMCHL1Q16048 86 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 DEFB116Q30KQ4 102 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 PP632Q6XCG6 107 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 C12orf57Q99622 126 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP4-11Q9BYQ6 195 aa0.89□□□□□ -2.27
CPNE3-211ENST00000621526 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
CPNE3-211ENST00000621526 A8MUN3 132 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 HSBP1L1C9JCN9 74 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 H0YAA0 97 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 H3BQ85 93 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 NDUFB1O75438 58 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 DPM2O94777 84 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 LEPROTL1O95214 131 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 IGKCP01834 107 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 C21orf62-AS1Q17RA5 79 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP19-7Q3SYF9 63 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 COA6Q5JTJ3 125 aaKnown RBP0.88□□□□□ -2.27
CPNE3-211ENST00000621526 LINC01545Q5VT33 79 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 PET117Q6UWS5 81 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP3-1Q9BYR8 98 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 S4R3F8 94 aa0.88□□□□□ -2.27
CPNE3-211ENST00000621526 MT1EP04732 61 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 S100A6P06703 90 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 S100A2P29034 98 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP12-4P60329 112 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 C4orf26Q17RF5 130 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 BVES-AS1Q5T3Y7 98 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 ANKRD29Q8N6D5 301 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP4-7Q9BYR0 210 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP3-3Q9BYR6 98 aa0.87□□□□□ -2.27
CPNE3-211ENST00000621526 H0YGX0 51 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 SYS1-DBNDD2H3BUS1 97 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP5-8O75690 187 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 FABP4P15090 132 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 C7orf65Q6ZTY9 151 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 Q6ZVQ6 151 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 MUSTN1Q8IVN3 82 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 YPEL4Q96NS1 127 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 PMCHL2Q9BQD1 86 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 KRTAP9-9Q9BYP9 154 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 C8orf17Q9NRJ1 99 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 OBSCNQ5VST9 7968 aa0.86□□□□□ -2.27
CPNE3-211ENST00000621526 IGKV2D-30A0A075B6S6 120 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 TMEM238LA0A1B0GVL6 79 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 A0A1B0GX51 115 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 A6NJY4 79 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 DLEU1O43261 78 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BKO60814 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 IGKV2-30P06310 120 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BJP06899 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BOP23527 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BBP33778 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BDP58876 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BCP62807 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST2H2BEQ16778 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.85□□□□□ -2.27
CPNE3-211ENST00000621526 SCGB1D4Q6XE38 83 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 C1orf64Q8NEQ6 169 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BHQ93079 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BNQ99877 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 HIST1H2BMQ99879 126 aa0.85□□□□□ -2.27
CPNE3-211ENST00000621526 A0A1B0GW54 56 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 H0Y8G0 127 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 TRACP01848 142 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 CCKP06307 115 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 COX6CP09669 75 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 FABP2P12104 132 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 KRTDAPP60985 99 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 Q5W150 140 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 MT1MQ8N339 61 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 TMEM254Q8TBM7 123 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 MRPL34Q9BQ48 92 aaKnown RBP0.84□□□□□ -2.27
CPNE3-211ENST00000621526 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
CPNE3-211ENST00000621526 HIST3H2BBQ8N257 126 aa0.83□□□□□ -2.28
CPNE3-211ENST00000621526 A0A0B4J2C4 111 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 hDV103S1A0JD37 113 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 TMEM256-PLSCR3K7ERE1 68 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 M0R143 59 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 DNAL4O96015 105 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 COX8AP10176 69 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms