RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 A8MUN3 132 aa11.37□□□□□ -0.59
PCDHGB3-202ENST00000618934 PCOTHQ58A44 107 aa11.37□□□□□ -0.59
PCDHGB3-202ENST00000618934 NDUFS5O43920 106 aa11.36□□□□□ -0.59
PCDHGB3-202ENST00000618934 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
PCDHGB3-202ENST00000618934 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
PCDHGB3-202ENST00000618934 CD164Q04900 197 aa11.33□□□□□ -0.6
PCDHGB3-202ENST00000618934 CDK2AP2O75956 126 aa11.33□□□□□ -0.6
PCDHGB3-202ENST00000618934 CIRBP-AS1Q8TBR5 109 aa11.33□□□□□ -0.6
PCDHGB3-202ENST00000618934 TP53AIP1Q9HCN2 124 aa11.33□□□□□ -0.6
PCDHGB3-202ENST00000618934 PKD1P98161 4303 aa11.32□□□□□ -0.6
PCDHGB3-202ENST00000618934 LRP1BQ9NZR2 4599 aa11.32□□□□□ -0.6
PCDHGB3-202ENST00000618934 MRPL34Q9BQ48 92 aaKnown RBP11.31□□□□□ -0.6
PCDHGB3-202ENST00000618934 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
PCDHGB3-202ENST00000618934 IGLV7-46A0A075B6I9 117 aa11.29□□□□□ -0.6
PCDHGB3-202ENST00000618934 Q5VV11 94 aa11.28□□□□□ -0.6
PCDHGB3-202ENST00000618934 Q8N9P0 234 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB3-202ENST00000618934 V9GYY9 64 aa11.28□□□□□ -0.6
PCDHGB3-202ENST00000618934 A8MU10 97 aa11.27□□□□□ -0.6
PCDHGB3-202ENST00000618934 FAT2Q9NYQ8 4349 aa11.26□□□□□ -0.61
PCDHGB3-202ENST00000618934 COA5Q86WW8 74 aa11.25□□□□□ -0.61
PCDHGB3-202ENST00000618934 Q5W150 140 aa11.23□□□□□ -0.61
PCDHGB3-202ENST00000618934 VPS13BQ7Z7G8 4022 aa11.21□□□□□ -0.61
PCDHGB3-202ENST00000618934 KRTAP10-1P60331 282 aa11.18□□□□□ -0.62
PCDHGB3-202ENST00000618934 PRR15LQ9BU68 103 aa11.18□□□□□ -0.62
PCDHGB3-202ENST00000618934 LIMD2Q9BT23 127 aa11.18□□□□□ -0.62
PCDHGB3-202ENST00000618934 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
PCDHGB3-202ENST00000618934 SSBP3-AS1Q7Z2R9 100 aa11.17□□□□□ -0.62
PCDHGB3-202ENST00000618934 CHKB-CPT1BH3BT56 60 aa11.16□□□□□ -0.62
PCDHGB3-202ENST00000618934 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
PCDHGB3-202ENST00000618934 PMAIP1Q13794 54 aa11.11□□□□□ -0.63
PCDHGB3-202ENST00000618934 Q6ZSA8 131 aa11.11□□□□□ -0.63
PCDHGB3-202ENST00000618934 HRES1P13985 223 aa11.1□□□□□ -0.63
PCDHGB3-202ENST00000618934 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
PCDHGB3-202ENST00000618934 RETNLBQ9BQ08 111 aa11.06□□□□□ -0.64
PCDHGB3-202ENST00000618934 PKHD1P08F94 4074 aa11.06□□□□□ -0.64
PCDHGB3-202ENST00000618934 Q75L30 129 aa11.05□□□□□ -0.64
PCDHGB3-202ENST00000618934 SPAG11AQ6PDA7 123 aa11.05□□□□□ -0.64
PCDHGB3-202ENST00000618934 LCA10Q71F78 164 aa11.05□□□□□ -0.64
PCDHGB3-202ENST00000618934 KRTAP1-4P0C5Y4 121 aa11.04□□□□□ -0.64
PCDHGB3-202ENST00000618934 LINC00313P59037 77 aa11.04□□□□□ -0.64
PCDHGB3-202ENST00000618934 C8orf87E5RJ46 101 aa11.03□□□□□ -0.64
PCDHGB3-202ENST00000618934 A6NED7 52 aa11□□□□□ -0.65
PCDHGB3-202ENST00000618934 SEC61GP60059 68 aa10.98□□□□□ -0.65
PCDHGB3-202ENST00000618934 LINC01558Q9Y6Z2 57 aa10.97□□□□□ -0.65
PCDHGB3-202ENST00000618934 SPTSSBQ8NFR3 76 aa10.97□□□□□ -0.65
PCDHGB3-202ENST00000618934 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.66
PCDHGB3-202ENST00000618934 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
PCDHGB3-202ENST00000618934 SACSQ9NZJ4 4579 aa10.91□□□□□ -0.66
PCDHGB3-202ENST00000618934 PLA2G1BP04054 148 aaKnown RBP10.9□□□□□ -0.66
PCDHGB3-202ENST00000618934 FAM229AH3BQW9 127 aa10.89□□□□□ -0.67
PCDHGB3-202ENST00000618934 ATP11AUNQ6ZP68 121 aa10.89□□□□□ -0.67
PCDHGB3-202ENST00000618934 CDC42SE1Q9NRR8 79 aa10.88□□□□□ -0.67
PCDHGB3-202ENST00000618934 SPINK7P58062 85 aa10.87□□□□□ -0.67
PCDHGB3-202ENST00000618934 IGKV2-30P06310 120 aa10.86□□□□□ -0.67
PCDHGB3-202ENST00000618934 ACYP2P14621 99 aa10.84□□□□□ -0.67
PCDHGB3-202ENST00000618934 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
PCDHGB3-202ENST00000618934 DMAC1Q96GE9 116 aa10.83□□□□□ -0.68
PCDHGB3-202ENST00000618934 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
PCDHGB3-202ENST00000618934 A6NN06 94 aa10.82□□□□□ -0.68
PCDHGB3-202ENST00000618934 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
PCDHGB3-202ENST00000618934 KTN1-AS1Q86SY8 53 aa10.79□□□□□ -0.68
PCDHGB3-202ENST00000618934 IGKV2D-30A0A075B6S6 120 aa10.78□□□□□ -0.68
PCDHGB3-202ENST00000618934 FAT1Q14517 4588 aa10.76□□□□□ -0.69
PCDHGB3-202ENST00000618934 SPINK1P00995 79 aa10.74□□□□□ -0.69
PCDHGB3-202ENST00000618934 SMR3BP02814 79 aaPredicted RBP10.74□□□□□ -0.69
PCDHGB3-202ENST00000618934 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
PCDHGB3-202ENST00000618934 LINC00304Q8N9R0 145 aa10.67□□□□□ -0.7
PCDHGB3-202ENST00000618934 PKHD1L1Q86WI1 4243 aa10.66□□□□□ -0.7
PCDHGB3-202ENST00000618934 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
PCDHGB3-202ENST00000618934 C7orf65Q6ZTY9 151 aa10.6□□□□□ -0.71
PCDHGB3-202ENST00000618934 KRTAP10-4P60372 401 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB3-202ENST00000618934 A0A1B0GU69 56 aa10.55□□□□□ -0.72
PCDHGB3-202ENST00000618934 C9orf92A6NGG3 77 aa10.55□□□□□ -0.72
PCDHGB3-202ENST00000618934 Q8N1X5 172 aa10.55□□□□□ -0.72
PCDHGB3-202ENST00000618934 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
PCDHGB3-202ENST00000618934 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
PCDHGB3-202ENST00000618934 KRTAP21-3Q3LHN1 58 aa10.52□□□□□ -0.73
PCDHGB3-202ENST00000618934 RYR2Q92736 4967 aa10.49□□□□□ -0.73
PCDHGB3-202ENST00000618934 KMT2CQ8NEZ4 4911 aaKnown RBP10.46□□□□□ -0.73
PCDHGB3-202ENST00000618934 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
PCDHGB3-202ENST00000618934 A8MUU9 505 aa10.42□□□□□ -0.74
PCDHGB3-202ENST00000618934 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
PCDHGB3-202ENST00000618934 PRAC1Q96KF2 57 aa10.39□□□□□ -0.75
PCDHGB3-202ENST00000618934 LRP1Q07954 4544 aaKnown RBP10.38□□□□□ -0.75
PCDHGB3-202ENST00000618934 ADM2Q7Z4H4 148 aa10.37□□□□□ -0.75
PCDHGB3-202ENST00000618934 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
PCDHGB3-202ENST00000618934 MIR22HGQ0VDD5 57 aa10.37□□□□□ -0.75
PCDHGB3-202ENST00000618934 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
PCDHGB3-202ENST00000618934 UQCR11O14957 56 aa10.35□□□□□ -0.75
PCDHGB3-202ENST00000618934 TNXBP22105 4242 aa10.33□□□□□ -0.76
PCDHGB3-202ENST00000618934 FAT3Q8TDW7 4589 aa10.3□□□□□ -0.76
PCDHGB3-202ENST00000618934 HSPG2P98160 4391 aa10.24□□□□□ -0.77
PCDHGB3-202ENST00000618934 MYCBP2O75592 4640 aa10.15□□□□□ -0.78
PCDHGB3-202ENST00000618934 DMBT1Q9UGM3 2413 aaPredicted RBP10.14□□□□□ -0.79
PCDHGB3-202ENST00000618934 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
PCDHGB3-202ENST00000618934 RYR3Q15413 4870 aa10.11□□□□□ -0.79
PCDHGB3-202ENST00000618934 H0YAA0 97 aa10.11□□□□□ -0.79
PCDHGB3-202ENST00000618934 KRTAP17-1Q9BYP8 105 aa10.1□□□□□ -0.79
PCDHGB3-202ENST00000618934 COX6B2Q6YFQ2 88 aa10.07□□□□□ -0.8
PCDHGB3-202ENST00000618934 Q5VSD8 79 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms