RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 FAM229BQ4G0N7 80 aa14.98□□□□□ -0.01
VEGFC-202ENST00000618562 ASB16-AS1Q495Z4 193 aa14.97□□□□□ -0.01
VEGFC-202ENST00000618562 C1orf64Q8NEQ6 169 aa14.93□□□□□ -0.02
VEGFC-202ENST00000618562 C8orf17Q9NRJ1 99 aa14.92□□□□□ -0.02
VEGFC-202ENST00000618562 A0A1B0GVX0 72 aa14.91□□□□□ -0.02
VEGFC-202ENST00000618562 TP53AIP1Q9HCN2 124 aa14.89□□□□□ -0.03
VEGFC-202ENST00000618562 APOBP04114 4563 aaKnown RBP14.89□□□□□ -0.03
VEGFC-202ENST00000618562 SPANXA2-OT1Q8N9U9 137 aa14.88□□□□□ -0.03
VEGFC-202ENST00000618562 CDK2AP2O75956 126 aa14.88□□□□□ -0.03
VEGFC-202ENST00000618562 SMR3BP02814 79 aaPredicted RBP14.86□□□□□ -0.03
VEGFC-202ENST00000618562 A0A087X002 238 aa14.86□□□□□ -0.03
VEGFC-202ENST00000618562 RYR3Q15413 4870 aa14.85□□□□□ -0.03
VEGFC-202ENST00000618562 KRTAP1-4P0C5Y4 121 aa14.85□□□□□ -0.03
VEGFC-202ENST00000618562 IGHV6-1A0A0B4J1U7 121 aa14.84□□□□□ -0.03
VEGFC-202ENST00000618562 CD164Q04900 197 aa14.82□□□□□ -0.04
VEGFC-202ENST00000618562 PRR4Q16378 134 aa14.82□□□□□ -0.04
VEGFC-202ENST00000618562 KRTAP13-2Q52LG2 175 aa14.81□□□□□ -0.04
VEGFC-202ENST00000618562 SSBP3-AS1Q7Z2R9 100 aa14.81□□□□□ -0.04
VEGFC-202ENST00000618562 MPLKIPQ8TAP9 179 aa14.81□□□□□ -0.04
VEGFC-202ENST00000618562 MRPL34Q9BQ48 92 aaKnown RBP14.77□□□□□ -0.05
VEGFC-202ENST00000618562 SPINK6Q6UWN8 80 aa14.76□□□□□ -0.05
VEGFC-202ENST00000618562 KRTAP10-4P60372 401 aaPredicted RBP14.73□□□□□ -0.05
VEGFC-202ENST00000618562 FAT1Q14517 4588 aa14.72□□□□□ -0.05
VEGFC-202ENST00000618562 Q1T7F1 81 aa14.71□□□□□ -0.05
VEGFC-202ENST00000618562 PLA2G1BP04054 148 aaKnown RBP14.7□□□□□ -0.06
VEGFC-202ENST00000618562 NDUFS5O43920 106 aa14.7□□□□□ -0.06
VEGFC-202ENST00000618562 NOTCH2NLQ7Z3S9 236 aa14.67□□□□□ -0.06
VEGFC-202ENST00000618562 IGLV7-46A0A075B6I9 117 aa14.65□□□□□ -0.06
VEGFC-202ENST00000618562 PRO0628Q9UI54 55 aa14.61□□□□□ -0.07
VEGFC-202ENST00000618562 C8orf87E5RJ46 101 aa14.59□□□□□ -0.07
VEGFC-202ENST00000618562 TYMSOSQ8TAI1 123 aa14.58□□□□□ -0.08
VEGFC-202ENST00000618562 PCOTHQ58A44 107 aa14.57□□□□□ -0.08
VEGFC-202ENST00000618562 V9GYY9 64 aa14.56□□□□□ -0.08
VEGFC-202ENST00000618562 PRR26Q8N8Z3 221 aa14.55□□□□□ -0.08
VEGFC-202ENST00000618562 LOC101927531A0A1B0GV80 90 aa14.5□□□□□ -0.09
VEGFC-202ENST00000618562 KRTAP13-3Q3SY46 172 aa14.49□□□□□ -0.09
VEGFC-202ENST00000618562 BRK1Q8WUW1 75 aa14.49□□□□□ -0.09
VEGFC-202ENST00000618562 HSPG2P98160 4391 aa14.49□□□□□ -0.09
VEGFC-202ENST00000618562 C1orf195Q5TG92 126 aa14.48□□□□□ -0.09
VEGFC-202ENST00000618562 COA5Q86WW8 74 aa14.48□□□□□ -0.09
VEGFC-202ENST00000618562 FAM229AH3BQW9 127 aa14.46□□□□□ -0.09
VEGFC-202ENST00000618562 C4orf48Q5BLP8 95 aa14.44□□□□□ -0.1
VEGFC-202ENST00000618562 LINC00313P59037 77 aa14.43□□□□□ -0.1
VEGFC-202ENST00000618562 Q5W150 140 aa14.43□□□□□ -0.1
VEGFC-202ENST00000618562 LIMD2Q9BT23 127 aa14.43□□□□□ -0.1
VEGFC-202ENST00000618562 SPINK1P00995 79 aa14.42□□□□□ -0.1
VEGFC-202ENST00000618562 RYR1P21817 5038 aa14.41□□□□□ -0.1
VEGFC-202ENST00000618562 PSPHP1O15172 72 aa14.41□□□□□ -0.1
VEGFC-202ENST00000618562 Q8N9P0 234 aaPredicted RBP14.41□□□□□ -0.1
VEGFC-202ENST00000618562 PKHD1L1Q86WI1 4243 aa14.41□□□□□ -0.1
VEGFC-202ENST00000618562 Q5VSD8 79 aa14.4□□□□□ -0.1
VEGFC-202ENST00000618562 LINC00304Q8N9R0 145 aa14.4□□□□□ -0.1
VEGFC-202ENST00000618562 A8MUN3 132 aa14.34□□□□□ -0.11
VEGFC-202ENST00000618562 KRTAP17-1Q9BYP8 105 aa14.34□□□□□ -0.11
VEGFC-202ENST00000618562 SPAG11AQ6PDA7 123 aa14.33□□□□□ -0.12
VEGFC-202ENST00000618562 EPPK1P58107 5090 aaKnown RBP14.31□□□□□ -0.12
VEGFC-202ENST00000618562 RPS29P62273 56 aaKnown RBP14.31□□□□□ -0.12
VEGFC-202ENST00000618562 KIAA1109Q2LD37 5005 aa14.3□□□□□ -0.12
VEGFC-202ENST00000618562 HRES1P13985 223 aa14.28□□□□□ -0.12
VEGFC-202ENST00000618562 Q5VV11 94 aa14.28□□□□□ -0.12
VEGFC-202ENST00000618562 KRTAP16-1A8MUX0 517 aa14.27□□□□□ -0.13
VEGFC-202ENST00000618562 PRR15LQ9BU68 103 aa14.22□□□□□ -0.13
VEGFC-202ENST00000618562 LRP1Q07954 4544 aaKnown RBP14.17□□□□□ -0.14
VEGFC-202ENST00000618562 IGKV2-30P06310 120 aa14.17□□□□□ -0.14
VEGFC-202ENST00000618562 Q8N1X5 172 aa14.16□□□□□ -0.14
VEGFC-202ENST00000618562 LINC01558Q9Y6Z2 57 aa14.16□□□□□ -0.14
VEGFC-202ENST00000618562 Q75L30 129 aa14.14□□□□□ -0.15
VEGFC-202ENST00000618562 ACYP2P14621 99 aa14.13□□□□□ -0.15
VEGFC-202ENST00000618562 CHKB-CPT1BH3BT56 60 aa14.13□□□□□ -0.15
VEGFC-202ENST00000618562 KRTAP10-8P60410 259 aa14.12□□□□□ -0.15
VEGFC-202ENST00000618562 DMAC1Q96GE9 116 aa14.11□□□□□ -0.15
VEGFC-202ENST00000618562 RETNLBQ9BQ08 111 aa14.11□□□□□ -0.15
VEGFC-202ENST00000618562 TNXBP22105 4242 aa14.1□□□□□ -0.15
VEGFC-202ENST00000618562 FLG2Q5D862 2391 aaPredicted RBP14.08□□□□□ -0.16
VEGFC-202ENST00000618562 FAT3Q8TDW7 4589 aa14.03□□□□□ -0.16
VEGFC-202ENST00000618562 A6NED7 52 aa13.95□□□□□ -0.18
VEGFC-202ENST00000618562 MYCBP2O75592 4640 aa13.94□□□□□ -0.18
VEGFC-202ENST00000618562 IGKV2D-30A0A075B6S6 120 aa13.94□□□□□ -0.18
VEGFC-202ENST00000618562 MT1HL1P0DM35 61 aa13.91□□□□□ -0.18
VEGFC-202ENST00000618562 A8MU10 97 aa13.89□□□□□ -0.19
VEGFC-202ENST00000618562 KRTAP4-5Q9BYR2 181 aa13.87□□□□□ -0.19
VEGFC-202ENST00000618562 DMBT1Q9UGM3 2413 aaPredicted RBP13.86□□□□□ -0.19
VEGFC-202ENST00000618562 LCA10Q71F78 164 aa13.86□□□□□ -0.19
VEGFC-202ENST00000618562 C9orf92A6NGG3 77 aa13.85□□□□□ -0.19
VEGFC-202ENST00000618562 CDC42SE1Q9NRR8 79 aa13.84□□□□□ -0.19
VEGFC-202ENST00000618562 C7orf65Q6ZTY9 151 aa13.81□□□□□ -0.2
VEGFC-202ENST00000618562 ATP11AUNQ6ZP68 121 aa13.77□□□□□ -0.21
VEGFC-202ENST00000618562 SPINK7P58062 85 aa13.76□□□□□ -0.21
VEGFC-202ENST00000618562 C20orf166-AS1Q96NR2 134 aa13.73□□□□□ -0.21
VEGFC-202ENST00000618562 A8MUU9 505 aa13.71□□□□□ -0.21
VEGFC-202ENST00000618562 PMAIP1Q13794 54 aa13.7□□□□□ -0.22
VEGFC-202ENST00000618562 SPTSSBQ8NFR3 76 aa13.68□□□□□ -0.22
VEGFC-202ENST00000618562 A0A1B0GU69 56 aa13.66□□□□□ -0.22
VEGFC-202ENST00000618562 BIRC6Q9NR09 4857 aa13.64□□□□□ -0.23
VEGFC-202ENST00000618562 ABCA13Q86UQ4 5058 aa13.58□□□□□ -0.24
VEGFC-202ENST00000618562 HERC2O95714 4834 aa13.55□□□□□ -0.24
VEGFC-202ENST00000618562 A6NN06 94 aa13.51□□□□□ -0.25
VEGFC-202ENST00000618562 XP32Q5T750 250 aa13.45□□□□□ -0.26
VEGFC-202ENST00000618562 UQCR11O14957 56 aa13.41□□□□□ -0.26
VEGFC-202ENST00000618562 SPATA8Q6RVD6 105 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms