RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 Q6ZVQ6 151 aa4.58□□□□□ -1.68
TARDBP-219ENST00000617757 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
TARDBP-219ENST00000617757 C1orf195Q5TG92 126 aa4.57□□□□□ -1.68
TARDBP-219ENST00000617757 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
TARDBP-219ENST00000617757 DEFB116Q30KQ4 102 aa4.56□□□□□ -1.68
TARDBP-219ENST00000617757 RETNLBQ9BQ08 111 aa4.55□□□□□ -1.68
TARDBP-219ENST00000617757 IGKV4-1P06312 121 aa4.54□□□□□ -1.68
TARDBP-219ENST00000617757 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
TARDBP-219ENST00000617757 J3KT08 172 aa4.53□□□□□ -1.68
TARDBP-219ENST00000617757 BPY2O14599 106 aa4.53□□□□□ -1.68
TARDBP-219ENST00000617757 SIGMAR1Q99720 223 aa4.53□□□□□ -1.68
TARDBP-219ENST00000617757 DMBT1Q9UGM3 2413 aaPredicted RBP4.52□□□□□ -1.69
TARDBP-219ENST00000617757 LINC00643Q86TS7 51 aa4.52□□□□□ -1.69
TARDBP-219ENST00000617757 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
TARDBP-219ENST00000617757 DSCR10P59022 87 aa4.51□□□□□ -1.69
TARDBP-219ENST00000617757 CXCL6P80162 114 aa4.5□□□□□ -1.69
TARDBP-219ENST00000617757 ATP5EP2Q5VTU8 51 aa4.5□□□□□ -1.69
TARDBP-219ENST00000617757 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
TARDBP-219ENST00000617757 A0A1B0GVX0 72 aa4.49□□□□□ -1.69
TARDBP-219ENST00000617757 A8MWP4 228 aa4.49□□□□□ -1.69
TARDBP-219ENST00000617757 NDUFB1O75438 58 aa4.49□□□□□ -1.69
TARDBP-219ENST00000617757 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
TARDBP-219ENST00000617757 K7EQZ3 153 aa4.48□□□□□ -1.69
TARDBP-219ENST00000617757 PRR4Q16378 134 aa4.48□□□□□ -1.69
TARDBP-219ENST00000617757 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
TARDBP-219ENST00000617757 Q8N9L7 120 aa4.48□□□□□ -1.69
TARDBP-219ENST00000617757 IGLV7-46A0A075B6I9 117 aa4.47□□□□□ -1.69
TARDBP-219ENST00000617757 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
TARDBP-219ENST00000617757 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
TARDBP-219ENST00000617757 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
TARDBP-219ENST00000617757 LPAP08519 4548 aa4.46□□□□□ -1.7
TARDBP-219ENST00000617757 HERC1Q15751 4861 aa4.46□□□□□ -1.7
TARDBP-219ENST00000617757 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
TARDBP-219ENST00000617757 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
TARDBP-219ENST00000617757 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
TARDBP-219ENST00000617757 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
TARDBP-219ENST00000617757 LINC00313P59037 77 aa4.44□□□□□ -1.7
TARDBP-219ENST00000617757 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
TARDBP-219ENST00000617757 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
TARDBP-219ENST00000617757 C8orf17Q9NRJ1 99 aa4.44□□□□□ -1.7
TARDBP-219ENST00000617757 A0A087WVE0 104 aa4.42□□□□□ -1.7
TARDBP-219ENST00000617757 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
TARDBP-219ENST00000617757 IMUPQ9GZP8 106 aa4.42□□□□□ -1.7
TARDBP-219ENST00000617757 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
TARDBP-219ENST00000617757 HCG22E2RYF7 251 aa4.41□□□□□ -1.7
TARDBP-219ENST00000617757 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
TARDBP-219ENST00000617757 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
TARDBP-219ENST00000617757 CASC2Q6XLA1 102 aa4.4□□□□□ -1.71
TARDBP-219ENST00000617757 WFDC13Q8IUB5 93 aa4.4□□□□□ -1.71
TARDBP-219ENST00000617757 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
TARDBP-219ENST00000617757 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
TARDBP-219ENST00000617757 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
TARDBP-219ENST00000617757 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
TARDBP-219ENST00000617757 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
TARDBP-219ENST00000617757 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
TARDBP-219ENST00000617757 C20orf166-AS1Q96NR2 134 aa4.37□□□□□ -1.71
TARDBP-219ENST00000617757 LRP2P98164 4655 aa4.36□□□□□ -1.71
TARDBP-219ENST00000617757 A8MUU9 505 aa4.36□□□□□ -1.71
TARDBP-219ENST00000617757 Q75L30 129 aa4.35□□□□□ -1.71
TARDBP-219ENST00000617757 NDUFS5O43920 106 aa4.34□□□□□ -1.71
TARDBP-219ENST00000617757 PCP4P48539 62 aa4.34□□□□□ -1.71
TARDBP-219ENST00000617757 RPL37P61927 97 aaKnown RBP4.34□□□□□ -1.71
TARDBP-219ENST00000617757 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
TARDBP-219ENST00000617757 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
TARDBP-219ENST00000617757 SCGB1A1P11684 91 aa4.3□□□□□ -1.72
TARDBP-219ENST00000617757 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
TARDBP-219ENST00000617757 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
TARDBP-219ENST00000617757 TP53AIP1Q9HCN2 124 aa4.3□□□□□ -1.72
TARDBP-219ENST00000617757 ATP11AUNQ6ZP68 121 aa4.29□□□□□ -1.72
TARDBP-219ENST00000617757 ZCCHC13Q8WW36 166 aaKnown RBP4.29□□□□□ -1.72
TARDBP-219ENST00000617757 ATOX1O00244 68 aa4.28□□□□□ -1.72
TARDBP-219ENST00000617757 Q5W150 140 aa4.28□□□□□ -1.72
TARDBP-219ENST00000617757 UQCRQO14949 82 aa4.27□□□□□ -1.73
TARDBP-219ENST00000617757 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
TARDBP-219ENST00000617757 PCOTHQ58A44 107 aa4.27□□□□□ -1.73
TARDBP-219ENST00000617757 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
TARDBP-219ENST00000617757 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
TARDBP-219ENST00000617757 TRAV22A0A0B4J277 110 aa4.25□□□□□ -1.73
TARDBP-219ENST00000617757 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
TARDBP-219ENST00000617757 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
TARDBP-219ENST00000617757 H0Y9P7 68 aa4.23□□□□□ -1.73
TARDBP-219ENST00000617757 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
TARDBP-219ENST00000617757 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
TARDBP-219ENST00000617757 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
TARDBP-219ENST00000617757 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
TARDBP-219ENST00000617757 MP68P56378 58 aa4.21□□□□□ -1.74
TARDBP-219ENST00000617757 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
TARDBP-219ENST00000617757 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
TARDBP-219ENST00000617757 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 COX7CP15954 63 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 SPINK7P58062 85 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 C1orf64Q8NEQ6 169 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
TARDBP-219ENST00000617757 LOC101927531A0A1B0GV80 90 aa4.18□□□□□ -1.74
TARDBP-219ENST00000617757 H3BPC8 53 aa4.18□□□□□ -1.74
TARDBP-219ENST00000617757 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
TARDBP-219ENST00000617757 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
TARDBP-219ENST00000617757 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms