RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
NEK3-207ENST00000617054 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 HCG22E2RYF7 251 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 A8MWP4 228 aa4.51□□□□□ -1.69
NEK3-207ENST00000617054 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
NEK3-207ENST00000617054 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
NEK3-207ENST00000617054 MYCBP2O75592 4640 aa4.51□□□□□ -1.69
NEK3-207ENST00000617054 RYR1P21817 5038 aa4.5□□□□□ -1.69
NEK3-207ENST00000617054 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
NEK3-207ENST00000617054 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
NEK3-207ENST00000617054 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
NEK3-207ENST00000617054 CASC2Q6XLA1 102 aa4.48□□□□□ -1.69
NEK3-207ENST00000617054 FAM229BQ4G0N7 80 aa4.48□□□□□ -1.69
NEK3-207ENST00000617054 NDUFB1O75438 58 aa4.48□□□□□ -1.69
NEK3-207ENST00000617054 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
NEK3-207ENST00000617054 CDK2AP2O75956 126 aa4.47□□□□□ -1.69
NEK3-207ENST00000617054 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
NEK3-207ENST00000617054 hDV103S1A0JD37 113 aa4.46□□□□□ -1.7
NEK3-207ENST00000617054 J3KT08 172 aa4.46□□□□□ -1.7
NEK3-207ENST00000617054 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
NEK3-207ENST00000617054 C1orf195Q5TG92 126 aa4.46□□□□□ -1.7
NEK3-207ENST00000617054 Q5VSD8 79 aa4.46□□□□□ -1.7
NEK3-207ENST00000617054 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
NEK3-207ENST00000617054 DMBT1Q9UGM3 2413 aaPredicted RBP4.45□□□□□ -1.7
NEK3-207ENST00000617054 H7BZZ5 65 aa4.45□□□□□ -1.7
NEK3-207ENST00000617054 CD164Q04900 197 aa4.45□□□□□ -1.7
NEK3-207ENST00000617054 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
NEK3-207ENST00000617054 NDUFS5O43920 106 aa4.45□□□□□ -1.7
NEK3-207ENST00000617054 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
NEK3-207ENST00000617054 TNXBP22105 4242 aa4.44□□□□□ -1.7
NEK3-207ENST00000617054 TMEM258P61165 79 aa4.44□□□□□ -1.7
NEK3-207ENST00000617054 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
NEK3-207ENST00000617054 RETNLBQ9BQ08 111 aa4.43□□□□□ -1.7
NEK3-207ENST00000617054 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
NEK3-207ENST00000617054 SPINK1P00995 79 aa4.41□□□□□ -1.7
NEK3-207ENST00000617054 KLKP1Q107X0 134 aa4.4□□□□□ -1.7
NEK3-207ENST00000617054 A0A0U1RQV1 116 aa4.4□□□□□ -1.71
NEK3-207ENST00000617054 LINC00208Q96KT6 92 aa4.4□□□□□ -1.71
NEK3-207ENST00000617054 FAM236DA0A1B0GTK5 79 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 FAM236CP0DP71 79 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 LIMD2Q9BT23 127 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 LINC00313P59037 77 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
NEK3-207ENST00000617054 Q5XG85 94 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 Q8N1X5 172 aa4.39□□□□□ -1.71
NEK3-207ENST00000617054 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
NEK3-207ENST00000617054 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
NEK3-207ENST00000617054 H0Y9P7 68 aa4.38□□□□□ -1.71
NEK3-207ENST00000617054 PRR4Q16378 134 aa4.38□□□□□ -1.71
NEK3-207ENST00000617054 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
NEK3-207ENST00000617054 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
NEK3-207ENST00000617054 Q5W150 140 aa4.37□□□□□ -1.71
NEK3-207ENST00000617054 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
NEK3-207ENST00000617054 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
NEK3-207ENST00000617054 MP68P56378 58 aa4.35□□□□□ -1.71
NEK3-207ENST00000617054 C1orf64Q8NEQ6 169 aa4.35□□□□□ -1.71
NEK3-207ENST00000617054 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.71
NEK3-207ENST00000617054 PCOTHQ58A44 107 aa4.34□□□□□ -1.72
NEK3-207ENST00000617054 SPAG11AQ6PDA7 123 aa4.34□□□□□ -1.72
NEK3-207ENST00000617054 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.72
NEK3-207ENST00000617054 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
NEK3-207ENST00000617054 KRTAP16-1A8MUX0 517 aa4.33□□□□□ -1.72
NEK3-207ENST00000617054 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
NEK3-207ENST00000617054 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
NEK3-207ENST00000617054 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
NEK3-207ENST00000617054 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
NEK3-207ENST00000617054 NDUFC1O43677 76 aa4.29□□□□□ -1.72
NEK3-207ENST00000617054 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
NEK3-207ENST00000617054 RPS29P62273 56 aaKnown RBP4.29□□□□□ -1.72
NEK3-207ENST00000617054 MT1HL1P0DM35 61 aa4.28□□□□□ -1.72
NEK3-207ENST00000617054 LPAP08519 4548 aa4.28□□□□□ -1.72
NEK3-207ENST00000617054 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
NEK3-207ENST00000617054 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
NEK3-207ENST00000617054 HERC2O95714 4834 aa4.27□□□□□ -1.73
NEK3-207ENST00000617054 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
NEK3-207ENST00000617054 IGKV2-30P06310 120 aa4.26□□□□□ -1.73
NEK3-207ENST00000617054 CYP4F30PQ9H0H9 118 aa4.24□□□□□ -1.73
NEK3-207ENST00000617054 H3BPC8 53 aa4.24□□□□□ -1.73
NEK3-207ENST00000617054 LRP2P98164 4655 aa4.23□□□□□ -1.73
NEK3-207ENST00000617054 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
NEK3-207ENST00000617054 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
NEK3-207ENST00000617054 PCLOQ9Y6V0 5065 aa4.22□□□□□ -1.73
NEK3-207ENST00000617054 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
NEK3-207ENST00000617054 LOC101927531A0A1B0GV80 90 aa4.21□□□□□ -1.74
NEK3-207ENST00000617054 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
NEK3-207ENST00000617054 HRES1P13985 223 aa4.2□□□□□ -1.74
NEK3-207ENST00000617054 A8MUU9 505 aa4.18□□□□□ -1.74
NEK3-207ENST00000617054 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
NEK3-207ENST00000617054 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
NEK3-207ENST00000617054 HERC1Q15751 4861 aa4.16□□□□□ -1.74
NEK3-207ENST00000617054 PSPHP1O15172 72 aa4.16□□□□□ -1.74
NEK3-207ENST00000617054 XP32Q5T750 250 aa4.15□□□□□ -1.74
NEK3-207ENST00000617054 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
NEK3-207ENST00000617054 A8MU10 97 aa4.14□□□□□ -1.75
NEK3-207ENST00000617054 COA5Q86WW8 74 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms