RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 NDUFAF8A1L188 74 aa8.06□□□□□ -1.12
PPP4R3B-205ENST00000616288 J3QKU1 62 aa8.06□□□□□ -1.12
PPP4R3B-205ENST00000616288 IGLV5-52A0A0A0MRZ9 124 aa8.05□□□□□ -1.12
PPP4R3B-205ENST00000616288 LY6G6CO95867 125 aa8.04□□□□□ -1.12
PPP4R3B-205ENST00000616288 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
PPP4R3B-205ENST00000616288 KRTAP10-11P60412 298 aa8.02□□□□□ -1.13
PPP4R3B-205ENST00000616288 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
PPP4R3B-205ENST00000616288 BSNQ9UPA5 3926 aa8.01□□□□□ -1.13
PPP4R3B-205ENST00000616288 SRRM2Q9UQ35 2752 aaKnown RBP8.01□□□□□ -1.13
PPP4R3B-205ENST00000616288 A8MUU9 505 aa8□□□□□ -1.13
PPP4R3B-205ENST00000616288 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
PPP4R3B-205ENST00000616288 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
PPP4R3B-205ENST00000616288 PDZD2O15018 2839 aa7.97□□□□□ -1.13
PPP4R3B-205ENST00000616288 KRTAP1-3Q8IUG1 177 aa7.97□□□□□ -1.13
PPP4R3B-205ENST00000616288 PKD1L1Q8TDX9 2849 aa7.96□□□□□ -1.14
PPP4R3B-205ENST00000616288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
PPP4R3B-205ENST00000616288 NBDYA0A0U1RRE5 68 aa7.95□□□□□ -1.14
PPP4R3B-205ENST00000616288 WWC2-AS2Q96NR7 200 aa7.95□□□□□ -1.14
PPP4R3B-205ENST00000616288 IGSF10Q6WRI0 2623 aa7.94□□□□□ -1.14
PPP4R3B-205ENST00000616288 VWFP04275 2813 aa7.92□□□□□ -1.14
PPP4R3B-205ENST00000616288 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
PPP4R3B-205ENST00000616288 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
PPP4R3B-205ENST00000616288 KRTAP1-1Q07627 177 aa7.89□□□□□ -1.15
PPP4R3B-205ENST00000616288 PANO1I0J062 215 aa7.88□□□□□ -1.15
PPP4R3B-205ENST00000616288 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
PPP4R3B-205ENST00000616288 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
PPP4R3B-205ENST00000616288 NUPR2A6NF83 97 aa7.87□□□□□ -1.15
PPP4R3B-205ENST00000616288 H1FX-AS1Q4G0G2 97 aa7.87□□□□□ -1.15
PPP4R3B-205ENST00000616288 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
PPP4R3B-205ENST00000616288 ITPR2Q14571 2701 aa7.84□□□□□ -1.16
PPP4R3B-205ENST00000616288 TENM3Q9P273 2699 aa7.83□□□□□ -1.16
PPP4R3B-205ENST00000616288 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
PPP4R3B-205ENST00000616288 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
PPP4R3B-205ENST00000616288 A0A087WTM6 91 aa7.79□□□□□ -1.16
PPP4R3B-205ENST00000616288 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
PPP4R3B-205ENST00000616288 Q6ZSA8 131 aa7.77□□□□□ -1.17
PPP4R3B-205ENST00000616288 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
PPP4R3B-205ENST00000616288 FBN1P35555 2871 aaKnown RBP7.76□□□□□ -1.17
PPP4R3B-205ENST00000616288 NBPF19A0A087WUL8 3843 aa7.75□□□□□ -1.17
PPP4R3B-205ENST00000616288 TGP01266 2768 aa7.74□□□□□ -1.17
PPP4R3B-205ENST00000616288 H0YAA0 97 aa7.74□□□□□ -1.17
PPP4R3B-205ENST00000616288 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
PPP4R3B-205ENST00000616288 TENM1Q9UKZ4 2725 aa7.69□□□□□ -1.18
PPP4R3B-205ENST00000616288 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
PPP4R3B-205ENST00000616288 COL7A1Q02388 2944 aa7.66□□□□□ -1.18
PPP4R3B-205ENST00000616288 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
PPP4R3B-205ENST00000616288 P0C880 135 aa7.64□□□□□ -1.19
PPP4R3B-205ENST00000616288 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
PPP4R3B-205ENST00000616288 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
PPP4R3B-205ENST00000616288 KRTAP13-3Q3SY46 172 aa7.6□□□□□ -1.19
PPP4R3B-205ENST00000616288 AKAP9Q99996 3911 aa7.58□□□□□ -1.2
PPP4R3B-205ENST00000616288 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
PPP4R3B-205ENST00000616288 TENM4Q6N022 2769 aa7.48□□□□□ -1.21
PPP4R3B-205ENST00000616288 SMR3BP02814 79 aaPredicted RBP7.43□□□□□ -1.22
PPP4R3B-205ENST00000616288 CSMD3Q7Z407 3707 aa7.42□□□□□ -1.22
PPP4R3B-205ENST00000616288 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
PPP4R3B-205ENST00000616288 TRRAPQ9Y4A5 3859 aa7.39□□□□□ -1.23
PPP4R3B-205ENST00000616288 S4R3F8 94 aa7.38□□□□□ -1.23
PPP4R3B-205ENST00000616288 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
PPP4R3B-205ENST00000616288 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
PPP4R3B-205ENST00000616288 ZNF469Q96JG9 3925 aaPredicted RBP7.32□□□□□ -1.24
PPP4R3B-205ENST00000616288 KRTAP10-2P60368 255 aa7.25□□□□□ -1.25
PPP4R3B-205ENST00000616288 FBN3Q75N90 2809 aa7.23□□□□□ -1.25
PPP4R3B-205ENST00000616288 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
PPP4R3B-205ENST00000616288 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
PPP4R3B-205ENST00000616288 R4GN34 69 aa7.21□□□□□ -1.26
PPP4R3B-205ENST00000616288 M0QZ58 72 aa7.19□□□□□ -1.26
PPP4R3B-205ENST00000616288 KRTAP10-1P60331 282 aa7.19□□□□□ -1.26
PPP4R3B-205ENST00000616288 MEGF8Q7Z7M0 2845 aa7.16□□□□□ -1.26
PPP4R3B-205ENST00000616288 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
PPP4R3B-205ENST00000616288 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
PPP4R3B-205ENST00000616288 ALMS1Q8TCU4 4167 aa7.08□□□□□ -1.28
PPP4R3B-205ENST00000616288 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
PPP4R3B-205ENST00000616288 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
PPP4R3B-205ENST00000616288 ANK3Q12955 4377 aaKnown RBP7.04□□□□□ -1.28
PPP4R3B-205ENST00000616288 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
PPP4R3B-205ENST00000616288 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
PPP4R3B-205ENST00000616288 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
PPP4R3B-205ENST00000616288 DNAH10Q8IVF4 4471 aa6.96□□□□□ -1.29
PPP4R3B-205ENST00000616288 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
PPP4R3B-205ENST00000616288 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
PPP4R3B-205ENST00000616288 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
PPP4R3B-205ENST00000616288 XP32Q5T750 250 aa6.76□□□□□ -1.33
PPP4R3B-205ENST00000616288 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
PPP4R3B-205ENST00000616288 LYSTQ99698 3801 aa6.72□□□□□ -1.33
PPP4R3B-205ENST00000616288 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
PPP4R3B-205ENST00000616288 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
PPP4R3B-205ENST00000616288 TNP1P09430 55 aa6.63□□□□□ -1.35
PPP4R3B-205ENST00000616288 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
PPP4R3B-205ENST00000616288 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
PPP4R3B-205ENST00000616288 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
PPP4R3B-205ENST00000616288 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
PPP4R3B-205ENST00000616288 ANK2Q01484 3957 aa6.56□□□□□ -1.36
PPP4R3B-205ENST00000616288 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
PPP4R3B-205ENST00000616288 Q5VSD8 79 aa6.5□□□□□ -1.37
PPP4R3B-205ENST00000616288 DNAH1Q9P2D7 4330 aa6.49□□□□□ -1.37
PPP4R3B-205ENST00000616288 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
PPP4R3B-205ENST00000616288 J3QL48 77 aa6.36□□□□□ -1.39
PPP4R3B-205ENST00000616288 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
PPP4R3B-205ENST00000616288 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms