RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
LINC00649-217ENST00000616030 Q6ZVQ6 151 aa5.94□□□□□ -1.46
LINC00649-217ENST00000616030 SPINK1P00995 79 aa5.93□□□□□ -1.46
LINC00649-217ENST00000616030 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
LINC00649-217ENST00000616030 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
LINC00649-217ENST00000616030 Q5XG85 94 aa5.91□□□□□ -1.46
LINC00649-217ENST00000616030 RETNLBQ9BQ08 111 aa5.91□□□□□ -1.46
LINC00649-217ENST00000616030 SIGMAR1Q99720 223 aa5.9□□□□□ -1.46
LINC00649-217ENST00000616030 LIMD2Q9BT23 127 aa5.9□□□□□ -1.46
LINC00649-217ENST00000616030 MUC17Q685J3 4493 aa5.9□□□□□ -1.47
LINC00649-217ENST00000616030 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
LINC00649-217ENST00000616030 BPY2O14599 106 aa5.89□□□□□ -1.47
LINC00649-217ENST00000616030 CXCL6P80162 114 aa5.89□□□□□ -1.47
LINC00649-217ENST00000616030 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
LINC00649-217ENST00000616030 J3KT08 172 aa5.88□□□□□ -1.47
LINC00649-217ENST00000616030 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
LINC00649-217ENST00000616030 IGKV3D-7A0A0C4DH55 119 aa5.87□□□□□ -1.47
LINC00649-217ENST00000616030 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
LINC00649-217ENST00000616030 IMUPQ9GZP8 106 aa5.87□□□□□ -1.47
LINC00649-217ENST00000616030 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
LINC00649-217ENST00000616030 Q96NJ1 140 aa5.83□□□□□ -1.48
LINC00649-217ENST00000616030 NDUFB1O75438 58 aa5.82□□□□□ -1.48
LINC00649-217ENST00000616030 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
LINC00649-217ENST00000616030 DSCR10P59022 87 aa5.82□□□□□ -1.48
LINC00649-217ENST00000616030 DEFB116Q30KQ4 102 aa5.82□□□□□ -1.48
LINC00649-217ENST00000616030 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
LINC00649-217ENST00000616030 A0A0U1RQV1 116 aa5.81□□□□□ -1.48
LINC00649-217ENST00000616030 A8MWP4 228 aa5.81□□□□□ -1.48
LINC00649-217ENST00000616030 HIST1H4AP62805 103 aaKnown RBP5.81□□□□□ -1.48
LINC00649-217ENST00000616030 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
LINC00649-217ENST00000616030 FAT4Q6V0I7 4981 aa5.78□□□□□ -1.48
LINC00649-217ENST00000616030 PRR15Q8IV56 129 aa5.78□□□□□ -1.48
LINC00649-217ENST00000616030 K7EQZ3 153 aa5.77□□□□□ -1.49
LINC00649-217ENST00000616030 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
LINC00649-217ENST00000616030 Q8N9L7 120 aa5.76□□□□□ -1.49
LINC00649-217ENST00000616030 SCGB1A1P11684 91 aa5.75□□□□□ -1.49
LINC00649-217ENST00000616030 A0A087WVE0 104 aa5.74□□□□□ -1.49
LINC00649-217ENST00000616030 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
LINC00649-217ENST00000616030 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
LINC00649-217ENST00000616030 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
LINC00649-217ENST00000616030 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
LINC00649-217ENST00000616030 FAM236AA0A1B0GUQ0 79 aa5.71□□□□□ -1.5
LINC00649-217ENST00000616030 FAM236BA0A1B0GV22 79 aa5.71□□□□□ -1.5
LINC00649-217ENST00000616030 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
LINC00649-217ENST00000616030 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
LINC00649-217ENST00000616030 LINC00313P59037 77 aa5.7□□□□□ -1.5
LINC00649-217ENST00000616030 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
LINC00649-217ENST00000616030 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
LINC00649-217ENST00000616030 CASC2Q6XLA1 102 aa5.69□□□□□ -1.5
LINC00649-217ENST00000616030 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
LINC00649-217ENST00000616030 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
LINC00649-217ENST00000616030 hDV103S1A0JD37 113 aa5.68□□□□□ -1.5
LINC00649-217ENST00000616030 ATOX1O00244 68 aa5.68□□□□□ -1.5
LINC00649-217ENST00000616030 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
LINC00649-217ENST00000616030 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
LINC00649-217ENST00000616030 TMEM254Q8TBM7 123 aa5.67□□□□□ -1.5
LINC00649-217ENST00000616030 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
LINC00649-217ENST00000616030 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
LINC00649-217ENST00000616030 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
LINC00649-217ENST00000616030 TRAV7A0A075B6U4 112 aa5.61□□□□□ -1.51
LINC00649-217ENST00000616030 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
LINC00649-217ENST00000616030 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
LINC00649-217ENST00000616030 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
LINC00649-217ENST00000616030 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
LINC00649-217ENST00000616030 Q8N9P0 234 aaPredicted RBP5.6□□□□□ -1.51
LINC00649-217ENST00000616030 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
LINC00649-217ENST00000616030 C9orf92A6NGG3 77 aa5.59□□□□□ -1.51
LINC00649-217ENST00000616030 UQCRQO14949 82 aa5.59□□□□□ -1.51
LINC00649-217ENST00000616030 NDUFS5O43920 106 aa5.59□□□□□ -1.51
LINC00649-217ENST00000616030 SERP2Q8N6R1 65 aa5.59□□□□□ -1.51
LINC00649-217ENST00000616030 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
LINC00649-217ENST00000616030 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
LINC00649-217ENST00000616030 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
LINC00649-217ENST00000616030 C20orf166-AS1Q96NR2 134 aa5.56□□□□□ -1.52
LINC00649-217ENST00000616030 A8MUU9 505 aa5.55□□□□□ -1.52
LINC00649-217ENST00000616030 COX7CP15954 63 aa5.55□□□□□ -1.52
LINC00649-217ENST00000616030 Q75L30 129 aa5.53□□□□□ -1.52
LINC00649-217ENST00000616030 PCP4P48539 62 aa5.52□□□□□ -1.53
LINC00649-217ENST00000616030 MP68P56378 58 aa5.52□□□□□ -1.53
LINC00649-217ENST00000616030 TRAV22A0A0B4J277 110 aa5.51□□□□□ -1.53
LINC00649-217ENST00000616030 H3BPC8 53 aa5.51□□□□□ -1.53
LINC00649-217ENST00000616030 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
LINC00649-217ENST00000616030 H0Y9P7 68 aa5.5□□□□□ -1.53
LINC00649-217ENST00000616030 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
LINC00649-217ENST00000616030 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
LINC00649-217ENST00000616030 MT1HP80294 61 aa5.48□□□□□ -1.53
LINC00649-217ENST00000616030 Q5W150 140 aa5.48□□□□□ -1.53
LINC00649-217ENST00000616030 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
LINC00649-217ENST00000616030 ATP11AUNQ6ZP68 121 aa5.47□□□□□ -1.53
LINC00649-217ENST00000616030 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
LINC00649-217ENST00000616030 LINC00208Q96KT6 92 aa5.46□□□□□ -1.54
LINC00649-217ENST00000616030 LOC101927531A0A1B0GV80 90 aa5.45□□□□□ -1.54
LINC00649-217ENST00000616030 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
LINC00649-217ENST00000616030 KLKP1Q107X0 134 aa5.45□□□□□ -1.54
LINC00649-217ENST00000616030 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
LINC00649-217ENST00000616030 NDUFC1O43677 76 aa5.42□□□□□ -1.54
LINC00649-217ENST00000616030 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
LINC00649-217ENST00000616030 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
LINC00649-217ENST00000616030 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
LINC00649-217ENST00000616030 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms