RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
CBWD1-223ENST00000613988 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
CBWD1-223ENST00000613988 CXCL6P80162 114 aa12.15□□□□□ -0.46
CBWD1-223ENST00000613988 ASB16-AS1Q495Z4 193 aa12.15□□□□□ -0.46
CBWD1-223ENST00000613988 IMUPQ9GZP8 106 aa12.12□□□□□ -0.47
CBWD1-223ENST00000613988 BPY2O14599 106 aa12.1□□□□□ -0.47
CBWD1-223ENST00000613988 SEC61BP60468 96 aaKnown RBP12.1□□□□□ -0.47
CBWD1-223ENST00000613988 Q5XG85 94 aa12.1□□□□□ -0.47
CBWD1-223ENST00000613988 IGKV3D-7A0A0C4DH55 119 aa12.09□□□□□ -0.47
CBWD1-223ENST00000613988 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
CBWD1-223ENST00000613988 LIMD2Q9BT23 127 aa12.06□□□□□ -0.48
CBWD1-223ENST00000613988 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
CBWD1-223ENST00000613988 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
CBWD1-223ENST00000613988 J3KT08 172 aa12.05□□□□□ -0.48
CBWD1-223ENST00000613988 KRTAP4-1Q9BYQ7 146 aa12.03□□□□□ -0.48
CBWD1-223ENST00000613988 XP32Q5T750 250 aa12□□□□□ -0.49
CBWD1-223ENST00000613988 Q96NJ1 140 aa12□□□□□ -0.49
CBWD1-223ENST00000613988 DSCR10P59022 87 aa11.98□□□□□ -0.49
CBWD1-223ENST00000613988 HIST1H4AP62805 103 aaKnown RBP11.97□□□□□ -0.49
CBWD1-223ENST00000613988 DEFB116Q30KQ4 102 aa11.96□□□□□ -0.49
CBWD1-223ENST00000613988 IGKV4-1P06312 121 aa11.94□□□□□ -0.5
CBWD1-223ENST00000613988 A8MWP4 228 aa11.93□□□□□ -0.5
CBWD1-223ENST00000613988 SCGB1A1P11684 91 aa11.93□□□□□ -0.5
CBWD1-223ENST00000613988 NDUFB1O75438 58 aa11.91□□□□□ -0.5
CBWD1-223ENST00000613988 C1orf195Q5TG92 126 aa11.9□□□□□ -0.5
CBWD1-223ENST00000613988 Q8N9L7 120 aa11.9□□□□□ -0.5
CBWD1-223ENST00000613988 K7EQZ3 153 aa11.89□□□□□ -0.51
CBWD1-223ENST00000613988 PRR15Q8IV56 129 aa11.88□□□□□ -0.51
CBWD1-223ENST00000613988 A0A087WVE0 104 aa11.87□□□□□ -0.51
CBWD1-223ENST00000613988 C9orf92A6NGG3 77 aa11.85□□□□□ -0.51
CBWD1-223ENST00000613988 FAM236AA0A1B0GUQ0 79 aa11.82□□□□□ -0.52
CBWD1-223ENST00000613988 FAM236BA0A1B0GV22 79 aa11.82□□□□□ -0.52
CBWD1-223ENST00000613988 A0A1B0GVX0 72 aa11.82□□□□□ -0.52
CBWD1-223ENST00000613988 KRTAP9-6A0A140TA67 174 aa11.81□□□□□ -0.52
CBWD1-223ENST00000613988 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
CBWD1-223ENST00000613988 HCG22E2RYF7 251 aa11.78□□□□□ -0.52
CBWD1-223ENST00000613988 IGHV6-1A0A0B4J1U7 121 aa11.75□□□□□ -0.53
CBWD1-223ENST00000613988 LCE2CQ5TA81 110 aa11.75□□□□□ -0.53
CBWD1-223ENST00000613988 C8orf87E5RJ46 101 aa11.74□□□□□ -0.53
CBWD1-223ENST00000613988 ATOX1O00244 68 aa11.73□□□□□ -0.53
CBWD1-223ENST00000613988 C8orf17Q9NRJ1 99 aa11.73□□□□□ -0.53
CBWD1-223ENST00000613988 MMP24-AS1A0A0U1RRL7 71 aa11.72□□□□□ -0.53
CBWD1-223ENST00000613988 CASC2Q6XLA1 102 aa11.7□□□□□ -0.54
CBWD1-223ENST00000613988 KRTAP19-2Q3LHN2 52 aa11.69□□□□□ -0.54
CBWD1-223ENST00000613988 hDV103S1A0JD37 113 aa11.67□□□□□ -0.54
CBWD1-223ENST00000613988 WFDC13Q8IUB5 93 aa11.67□□□□□ -0.54
CBWD1-223ENST00000613988 SMIM20Q8N5G0 67 aa11.67□□□□□ -0.54
CBWD1-223ENST00000613988 LINC00313P59037 77 aa11.66□□□□□ -0.54
CBWD1-223ENST00000613988 TMEM254Q8TBM7 123 aa11.64□□□□□ -0.55
CBWD1-223ENST00000613988 MT1HP80294 61 aa11.63□□□□□ -0.55
CBWD1-223ENST00000613988 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
CBWD1-223ENST00000613988 ANAPC13Q9BS18 74 aa11.62□□□□□ -0.55
CBWD1-223ENST00000613988 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
CBWD1-223ENST00000613988 FSIP2Q5CZC0 6907 aa11.6□□□□□ -0.55
CBWD1-223ENST00000613988 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
CBWD1-223ENST00000613988 TRAV7A0A075B6U4 112 aa11.57□□□□□ -0.56
CBWD1-223ENST00000613988 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
CBWD1-223ENST00000613988 OCR1Q9BZK8 76 aa11.56□□□□□ -0.56
CBWD1-223ENST00000613988 KRTAP16-1A8MUX0 517 aa11.52□□□□□ -0.57
CBWD1-223ENST00000613988 TP53AIP1Q9HCN2 124 aa11.52□□□□□ -0.57
CBWD1-223ENST00000613988 PCP4P48539 62 aa11.51□□□□□ -0.57
CBWD1-223ENST00000613988 UQCRQO14949 82 aa11.49□□□□□ -0.57
CBWD1-223ENST00000613988 Q8N9P0 234 aaPredicted RBP11.49□□□□□ -0.57
CBWD1-223ENST00000613988 COX7CP15954 63 aa11.48□□□□□ -0.57
CBWD1-223ENST00000613988 COX6B2Q6YFQ2 88 aa11.48□□□□□ -0.57
CBWD1-223ENST00000613988 CRCT1Q9UGL9 99 aa11.47□□□□□ -0.57
CBWD1-223ENST00000613988 M0R2T5 61 aa11.46□□□□□ -0.57
CBWD1-223ENST00000613988 NDUFS5O43920 106 aa11.46□□□□□ -0.57
CBWD1-223ENST00000613988 LORP23490 312 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-223ENST00000613988 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-223ENST00000613988 FLGP20930 4061 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-223ENST00000613988 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
CBWD1-223ENST00000613988 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
CBWD1-223ENST00000613988 C20orf166-AS1Q96NR2 134 aa11.39□□□□□ -0.59
CBWD1-223ENST00000613988 Q75L30 129 aa11.37□□□□□ -0.59
CBWD1-223ENST00000613988 A8MUU9 505 aa11.36□□□□□ -0.59
CBWD1-223ENST00000613988 TRAV22A0A0B4J277 110 aa11.35□□□□□ -0.59
CBWD1-223ENST00000613988 MP68P56378 58 aa11.35□□□□□ -0.59
CBWD1-223ENST00000613988 H0Y9P7 68 aa11.32□□□□□ -0.6
CBWD1-223ENST00000613988 H3BPC8 53 aa11.32□□□□□ -0.6
CBWD1-223ENST00000613988 CCDC179H3BU77 68 aa11.32□□□□□ -0.6
CBWD1-223ENST00000613988 C20orf197Q8N268 126 aa11.3□□□□□ -0.6
CBWD1-223ENST00000613988 KLKP1Q107X0 134 aa11.28□□□□□ -0.6
CBWD1-223ENST00000613988 Q5W150 140 aa11.26□□□□□ -0.61
CBWD1-223ENST00000613988 ZCCHC13Q8WW36 166 aaKnown RBP11.25□□□□□ -0.61
CBWD1-223ENST00000613988 LINC00208Q96KT6 92 aa11.23□□□□□ -0.61
CBWD1-223ENST00000613988 C1orf64Q8NEQ6 169 aa11.21□□□□□ -0.61
CBWD1-223ENST00000613988 SNURFQ9Y675 71 aa11.2□□□□□ -0.62
CBWD1-223ENST00000613988 LOC101927531A0A1B0GV80 90 aa11.18□□□□□ -0.62
CBWD1-223ENST00000613988 NDUFC1O43677 76 aa11.18□□□□□ -0.62
CBWD1-223ENST00000613988 IGKV2-30P06310 120 aa11.11□□□□□ -0.63
CBWD1-223ENST00000613988 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
CBWD1-223ENST00000613988 CYP4F30PQ9H0H9 118 aa11.08□□□□□ -0.64
CBWD1-223ENST00000613988 H7BZZ5 65 aa11.07□□□□□ -0.64
CBWD1-223ENST00000613988 C7orf65Q6ZTY9 151 aa11.04□□□□□ -0.64
CBWD1-223ENST00000613988 IGKV2D-30A0A075B6S6 120 aa11.03□□□□□ -0.64
CBWD1-223ENST00000613988 TMEM258P61165 79 aa11□□□□□ -0.65
CBWD1-223ENST00000613988 KRTAP9-8Q9BYQ0 159 aa10.97□□□□□ -0.65
CBWD1-223ENST00000613988 SPINK7P58062 85 aa10.95□□□□□ -0.66
CBWD1-223ENST00000613988 SPANXA2-OT1Q8N9U9 137 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms