RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
TNFAIP3-206ENST00000612899 Q5W150 140 aa7.49□□□□□ -1.21
TNFAIP3-206ENST00000612899 A0A1B0GU33 70 aa7.45□□□□□ -1.22
TNFAIP3-206ENST00000612899 LCE6AA0A183 80 aa7.43□□□□□ -1.22
TNFAIP3-206ENST00000612899 HRNRQ86YZ3 2850 aaPredicted RBP7.43□□□□□ -1.22
TNFAIP3-206ENST00000612899 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
TNFAIP3-206ENST00000612899 Q6ZR54 194 aa7.42□□□□□ -1.22
TNFAIP3-206ENST00000612899 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
TNFAIP3-206ENST00000612899 A8MU10 97 aa7.4□□□□□ -1.22
TNFAIP3-206ENST00000612899 DCHS1Q96JQ0 3298 aa7.4□□□□□ -1.23
TNFAIP3-206ENST00000612899 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
TNFAIP3-206ENST00000612899 Q5VSD8 79 aa7.37□□□□□ -1.23
TNFAIP3-206ENST00000612899 KRTAP11-1Q8IUC1 163 aa7.37□□□□□ -1.23
TNFAIP3-206ENST00000612899 ASPMQ8IZT6 3477 aa7.36□□□□□ -1.23
TNFAIP3-206ENST00000612899 RELNP78509 3460 aa7.36□□□□□ -1.23
TNFAIP3-206ENST00000612899 LAMA5O15230 3695 aa7.35□□□□□ -1.23
TNFAIP3-206ENST00000612899 ROMO1P60602 79 aa7.35□□□□□ -1.23
TNFAIP3-206ENST00000612899 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
TNFAIP3-206ENST00000612899 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
TNFAIP3-206ENST00000612899 WDFY3Q8IZQ1 3526 aa7.34□□□□□ -1.23
TNFAIP3-206ENST00000612899 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
TNFAIP3-206ENST00000612899 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
TNFAIP3-206ENST00000612899 DMDP11532 3685 aa7.33□□□□□ -1.24
TNFAIP3-206ENST00000612899 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
TNFAIP3-206ENST00000612899 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
TNFAIP3-206ENST00000612899 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
TNFAIP3-206ENST00000612899 M0R2T5 61 aa7.3□□□□□ -1.24
TNFAIP3-206ENST00000612899 S4R3F8 94 aa7.29□□□□□ -1.24
TNFAIP3-206ENST00000612899 MXRA5Q9NR99 2828 aa7.29□□□□□ -1.24
TNFAIP3-206ENST00000612899 TENM1Q9UKZ4 2725 aa7.28□□□□□ -1.24
TNFAIP3-206ENST00000612899 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
TNFAIP3-206ENST00000612899 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
TNFAIP3-206ENST00000612899 PKD1L1Q8TDX9 2849 aa7.22□□□□□ -1.25
TNFAIP3-206ENST00000612899 CELSR1Q9NYQ6 3014 aa7.21□□□□□ -1.26
TNFAIP3-206ENST00000612899 R4GN34 69 aa7.2□□□□□ -1.26
TNFAIP3-206ENST00000612899 KRTAP13-1Q8IUC0 172 aa7.15□□□□□ -1.26
TNFAIP3-206ENST00000612899 KRTAP13-2Q52LG2 175 aa7.14□□□□□ -1.27
TNFAIP3-206ENST00000612899 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
TNFAIP3-206ENST00000612899 ZFHX4Q86UP3 3567 aa7.1□□□□□ -1.27
TNFAIP3-206ENST00000612899 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
TNFAIP3-206ENST00000612899 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
TNFAIP3-206ENST00000612899 M0QZ58 72 aa7.07□□□□□ -1.28
TNFAIP3-206ENST00000612899 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
TNFAIP3-206ENST00000612899 VWFP04275 2813 aa7.06□□□□□ -1.28
TNFAIP3-206ENST00000612899 A8MUU9 505 aa7.05□□□□□ -1.28
TNFAIP3-206ENST00000612899 PDZD2O15018 2839 aa7.04□□□□□ -1.28
TNFAIP3-206ENST00000612899 SMG1Q96Q15 3661 aaKnown RBP7.03□□□□□ -1.28
TNFAIP3-206ENST00000612899 FBN1P35555 2871 aaKnown RBP7.03□□□□□ -1.28
TNFAIP3-206ENST00000612899 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
TNFAIP3-206ENST00000612899 TGP01266 2768 aa7□□□□□ -1.29
TNFAIP3-206ENST00000612899 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
TNFAIP3-206ENST00000612899 KRTAP21-3Q3LHN1 58 aa6.9□□□□□ -1.3
TNFAIP3-206ENST00000612899 ZFHX3Q15911 3703 aa6.86□□□□□ -1.31
TNFAIP3-206ENST00000612899 OTOGQ6ZRI0 2925 aa6.85□□□□□ -1.31
TNFAIP3-206ENST00000612899 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.32
TNFAIP3-206ENST00000612899 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
TNFAIP3-206ENST00000612899 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
TNFAIP3-206ENST00000612899 CSMD1Q96PZ7 3565 aa6.78□□□□□ -1.32
TNFAIP3-206ENST00000612899 CUBNO60494 3623 aa6.75□□□□□ -1.33
TNFAIP3-206ENST00000612899 CSMD2Q7Z408 3487 aa6.74□□□□□ -1.33
TNFAIP3-206ENST00000612899 SVEP1Q4LDE5 3571 aa6.74□□□□□ -1.33
TNFAIP3-206ENST00000612899 SPENQ96T58 3664 aaKnown RBP6.67□□□□□ -1.34
TNFAIP3-206ENST00000612899 XP32Q5T750 250 aa6.67□□□□□ -1.34
TNFAIP3-206ENST00000612899 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
TNFAIP3-206ENST00000612899 H0YAA0 97 aa6.59□□□□□ -1.35
TNFAIP3-206ENST00000612899 P0C880 135 aa6.59□□□□□ -1.35
TNFAIP3-206ENST00000612899 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
TNFAIP3-206ENST00000612899 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
TNFAIP3-206ENST00000612899 TNP1P09430 55 aa6.5□□□□□ -1.37
TNFAIP3-206ENST00000612899 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
TNFAIP3-206ENST00000612899 A0A1B0GVY2 172 aa6.49□□□□□ -1.37
TNFAIP3-206ENST00000612899 BSNQ9UPA5 3926 aa6.47□□□□□ -1.37
TNFAIP3-206ENST00000612899 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
TNFAIP3-206ENST00000612899 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
TNFAIP3-206ENST00000612899 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
TNFAIP3-206ENST00000612899 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
TNFAIP3-206ENST00000612899 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
TNFAIP3-206ENST00000612899 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
TNFAIP3-206ENST00000612899 ANK3Q12955 4377 aaKnown RBP6.27□□□□□ -1.4
TNFAIP3-206ENST00000612899 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
TNFAIP3-206ENST00000612899 VPS13CQ709C8 3753 aa6.17□□□□□ -1.42
TNFAIP3-206ENST00000612899 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
TNFAIP3-206ENST00000612899 ZNF469Q96JG9 3925 aaPredicted RBP6.12□□□□□ -1.43
TNFAIP3-206ENST00000612899 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
TNFAIP3-206ENST00000612899 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
TNFAIP3-206ENST00000612899 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
TNFAIP3-206ENST00000612899 INE1O15225 51 aa6.01□□□□□ -1.45
TNFAIP3-206ENST00000612899 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
TNFAIP3-206ENST00000612899 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
TNFAIP3-206ENST00000612899 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
TNFAIP3-206ENST00000612899 CSMD3Q7Z407 3707 aa5.9□□□□□ -1.46
TNFAIP3-206ENST00000612899 HUWE1Q7Z6Z7 4374 aaKnown RBP5.86□□□□□ -1.47
TNFAIP3-206ENST00000612899 AKAP9Q99996 3911 aa5.85□□□□□ -1.47
TNFAIP3-206ENST00000612899 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
TNFAIP3-206ENST00000612899 DNHD1Q96M86 4753 aa5.8□□□□□ -1.48
TNFAIP3-206ENST00000612899 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
TNFAIP3-206ENST00000612899 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
TNFAIP3-206ENST00000612899 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
TNFAIP3-206ENST00000612899 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.5
TNFAIP3-206ENST00000612899 DNAH9Q9NYC9 4486 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms