RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 HIST1H2BJP06899 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BOP23527 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BBP33778 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BDP58876 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BCP62807 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST2H2BEQ16778 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 DEFB116Q30KQ4 102 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 H1FX-AS1Q4G0G2 97 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BHQ93079 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BNQ99877 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 HIST1H2BMQ99879 126 aa4.62□□□□□ -1.67
SSX3-204ENST00000612497 NDUFV3P56181 108 aaKnown RBP4.61□□□□□ -1.67
SSX3-204ENST00000612497 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
SSX3-204ENST00000612497 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
SSX3-204ENST00000612497 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
SSX3-204ENST00000612497 A0A1B0GX51 115 aa4.6□□□□□ -1.67
SSX3-204ENST00000612497 H3BS24 57 aa4.6□□□□□ -1.67
SSX3-204ENST00000612497 COA6Q5JTJ3 125 aaKnown RBP4.6□□□□□ -1.67
SSX3-204ENST00000612497 C21orf62-AS1Q17RA5 79 aa4.59□□□□□ -1.67
SSX3-204ENST00000612497 H3BMG7 143 aa4.58□□□□□ -1.68
SSX3-204ENST00000612497 SPRR2DP22532 72 aa4.58□□□□□ -1.68
SSX3-204ENST00000612497 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
SSX3-204ENST00000612497 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
SSX3-204ENST00000612497 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
SSX3-204ENST00000612497 TRBV7-4A0A0J9YYF1 115 aa4.56□□□□□ -1.68
SSX3-204ENST00000612497 LYRM7Q5U5X0 104 aa4.56□□□□□ -1.68
SSX3-204ENST00000612497 LINC00472Q9H8W2 130 aa4.56□□□□□ -1.68
SSX3-204ENST00000612497 SPRR2GQ9BYE4 73 aa4.55□□□□□ -1.68
SSX3-204ENST00000612497 A0A1B0GVX0 72 aa4.54□□□□□ -1.68
SSX3-204ENST00000612497 RAB37Q96AX2 223 aa4.54□□□□□ -1.68
SSX3-204ENST00000612497 HIST1H4GQ99525 98 aa4.54□□□□□ -1.68
SSX3-204ENST00000612497 DNAL4O96015 105 aa4.52□□□□□ -1.69
SSX3-204ENST00000612497 ATOH7Q8N100 152 aa4.52□□□□□ -1.69
SSX3-204ENST00000612497 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
SSX3-204ENST00000612497 TMEM238LA0A1B0GVL6 79 aa4.51□□□□□ -1.69
SSX3-204ENST00000612497 J3KT08 172 aa4.51□□□□□ -1.69
SSX3-204ENST00000612497 FABP2P12104 132 aa4.51□□□□□ -1.69
SSX3-204ENST00000612497 ANKRD29Q8N6D5 301 aa4.51□□□□□ -1.69
SSX3-204ENST00000612497 A0A0B4J2C4 111 aa4.5□□□□□ -1.69
SSX3-204ENST00000612497 TRACP01848 142 aa4.5□□□□□ -1.69
SSX3-204ENST00000612497 S100A2P29034 98 aa4.49□□□□□ -1.69
SSX3-204ENST00000612497 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
SSX3-204ENST00000612497 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
SSX3-204ENST00000612497 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
SSX3-204ENST00000612497 DLEU1O43261 78 aa4.48□□□□□ -1.69
SSX3-204ENST00000612497 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
SSX3-204ENST00000612497 A0A1B0GV72 72 aa4.47□□□□□ -1.69
SSX3-204ENST00000612497 NDUFB1O75438 58 aa4.47□□□□□ -1.69
SSX3-204ENST00000612497 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
SSX3-204ENST00000612497 CCKP06307 115 aa4.45□□□□□ -1.7
SSX3-204ENST00000612497 COX6CP09669 75 aa4.44□□□□□ -1.7
SSX3-204ENST00000612497 COX8AP10176 69 aa4.44□□□□□ -1.7
SSX3-204ENST00000612497 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
SSX3-204ENST00000612497 PRO1854Q9UHT4 67 aa4.43□□□□□ -1.7
SSX3-204ENST00000612497 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
SSX3-204ENST00000612497 A0A1B0GW54 56 aa4.42□□□□□ -1.7
SSX3-204ENST00000612497 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
SSX3-204ENST00000612497 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
SSX3-204ENST00000612497 S100A6P06703 90 aa4.4□□□□□ -1.71
SSX3-204ENST00000612497 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.71
SSX3-204ENST00000612497 KLKP1Q107X0 134 aa4.39□□□□□ -1.71
SSX3-204ENST00000612497 HIST3H2BBQ8N257 126 aa4.39□□□□□ -1.71
SSX3-204ENST00000612497 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
SSX3-204ENST00000612497 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
SSX3-204ENST00000612497 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
SSX3-204ENST00000612497 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
SSX3-204ENST00000612497 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
SSX3-204ENST00000612497 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
SSX3-204ENST00000612497 CEND1Q8N111 149 aa4.37□□□□□ -1.71
SSX3-204ENST00000612497 TRIAP1O43715 76 aa4.36□□□□□ -1.71
SSX3-204ENST00000612497 S100A1P23297 94 aa4.36□□□□□ -1.71
SSX3-204ENST00000612497 PSMB2P49721 201 aa4.36□□□□□ -1.71
SSX3-204ENST00000612497 Q6ZVQ6 151 aa4.36□□□□□ -1.71
SSX3-204ENST00000612497 C9JAW5 83 aa4.35□□□□□ -1.71
SSX3-204ENST00000612497 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
SSX3-204ENST00000612497 C2orf91Q6ZV80 131 aa4.35□□□□□ -1.71
SSX3-204ENST00000612497 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
SSX3-204ENST00000612497 PDE6GP18545 87 aa4.34□□□□□ -1.71
SSX3-204ENST00000612497 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
SSX3-204ENST00000612497 S4R3F8 94 aa4.33□□□□□ -1.72
SSX3-204ENST00000612497 Q6ZQT0 140 aa4.32□□□□□ -1.72
SSX3-204ENST00000612497 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
SSX3-204ENST00000612497 VAMP8Q9BV40 100 aa4.32□□□□□ -1.72
SSX3-204ENST00000612497 JMJD7-PLA2G4BH0Y9G9 81 aa4.31□□□□□ -1.72
SSX3-204ENST00000612497 LCA10Q71F78 164 aa4.31□□□□□ -1.72
SSX3-204ENST00000612497 NDUFS5O43920 106 aa4.3□□□□□ -1.72
SSX3-204ENST00000612497 SPATA45Q537H7 98 aa4.3□□□□□ -1.72
SSX3-204ENST00000612497 C14orf144Q96I85 54 aa4.3□□□□□ -1.72
SSX3-204ENST00000612497 MT1XP80297 61 aa4.29□□□□□ -1.72
SSX3-204ENST00000612497 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
SSX3-204ENST00000612497 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
SSX3-204ENST00000612497 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
SSX3-204ENST00000612497 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
SSX3-204ENST00000612497 HSD52Q0P140 79 aa4.28□□□□□ -1.72
SSX3-204ENST00000612497 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
SSX3-204ENST00000612497 SCGB1C2P0DMR2 95 aa4.26□□□□□ -1.73
SSX3-204ENST00000612497 FXYD2P54710 66 aa4.26□□□□□ -1.73
SSX3-204ENST00000612497 LOC110117498A0A087WWA1 95 aa4.25□□□□□ -1.73
SSX3-204ENST00000612497 Q5W150 140 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms