RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MP68P56378 58 aa8.35□□□□□ -1.07
PCDHGA3-202ENST00000612467 C1orf64Q8NEQ6 169 aa8.35□□□□□ -1.07
PCDHGA3-202ENST00000612467 ZNF706Q9Y5V0 76 aaPredicted RBP8.35□□□□□ -1.07
PCDHGA3-202ENST00000612467 NDUFB1O75438 58 aa8.33□□□□□ -1.08
PCDHGA3-202ENST00000612467 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
PCDHGA3-202ENST00000612467 KRTAP10-1P60331 282 aa8.31□□□□□ -1.08
PCDHGA3-202ENST00000612467 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
PCDHGA3-202ENST00000612467 NDUFS5O43920 106 aa8.3□□□□□ -1.08
PCDHGA3-202ENST00000612467 VPS13BQ7Z7G8 4022 aa8.29□□□□□ -1.08
PCDHGA3-202ENST00000612467 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
PCDHGA3-202ENST00000612467 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
PCDHGA3-202ENST00000612467 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
PCDHGA3-202ENST00000612467 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
PCDHGA3-202ENST00000612467 Q1T7F1 81 aa8.25□□□□□ -1.09
PCDHGA3-202ENST00000612467 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
PCDHGA3-202ENST00000612467 A8MUN3 132 aa8.24□□□□□ -1.09
PCDHGA3-202ENST00000612467 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
PCDHGA3-202ENST00000612467 SACSQ9NZJ4 4579 aa8.22□□□□□ -1.09
PCDHGA3-202ENST00000612467 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
PCDHGA3-202ENST00000612467 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
PCDHGA3-202ENST00000612467 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
PCDHGA3-202ENST00000612467 CD164Q04900 197 aa8.19□□□□□ -1.1
PCDHGA3-202ENST00000612467 Q5W150 140 aa8.17□□□□□ -1.1
PCDHGA3-202ENST00000612467 Q6ZSA8 131 aa8.17□□□□□ -1.1
PCDHGA3-202ENST00000612467 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
PCDHGA3-202ENST00000612467 H3BPC8 53 aa8.15□□□□□ -1.1
PCDHGA3-202ENST00000612467 Q5VV11 94 aa8.14□□□□□ -1.11
PCDHGA3-202ENST00000612467 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
PCDHGA3-202ENST00000612467 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 FAT1Q14517 4588 aa8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 KRTAP1-4P0C5Y4 121 aa8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 SPANXA2-OT1Q8N9U9 137 aa8.11□□□□□ -1.11
PCDHGA3-202ENST00000612467 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 CHKB-CPT1BH3BT56 60 aa8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 COA5Q86WW8 74 aa8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
PCDHGA3-202ENST00000612467 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
PCDHGA3-202ENST00000612467 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
PCDHGA3-202ENST00000612467 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
PCDHGA3-202ENST00000612467 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
PCDHGA3-202ENST00000612467 LINC00313P59037 77 aa8.03□□□□□ -1.12
PCDHGA3-202ENST00000612467 LCA10Q71F78 164 aa8.03□□□□□ -1.12
PCDHGA3-202ENST00000612467 KMT2CQ8NEZ4 4911 aaKnown RBP8□□□□□ -1.13
PCDHGA3-202ENST00000612467 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
PCDHGA3-202ENST00000612467 HRES1P13985 223 aa7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 APOBP04114 4563 aaKnown RBP7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
PCDHGA3-202ENST00000612467 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
PCDHGA3-202ENST00000612467 C8orf87E5RJ46 101 aa7.96□□□□□ -1.13
PCDHGA3-202ENST00000612467 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
PCDHGA3-202ENST00000612467 LOC101927531A0A1B0GV80 90 aa7.95□□□□□ -1.14
PCDHGA3-202ENST00000612467 KTN1-AS1Q86SY8 53 aa7.94□□□□□ -1.14
PCDHGA3-202ENST00000612467 A6NED7 52 aa7.94□□□□□ -1.14
PCDHGA3-202ENST00000612467 RYR2Q92736 4967 aa7.93□□□□□ -1.14
PCDHGA3-202ENST00000612467 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
PCDHGA3-202ENST00000612467 A6NN06 94 aa7.9□□□□□ -1.14
PCDHGA3-202ENST00000612467 IGKV2D-30A0A075B6S6 120 aa7.89□□□□□ -1.15
PCDHGA3-202ENST00000612467 IGKV2-30P06310 120 aa7.89□□□□□ -1.15
PCDHGA3-202ENST00000612467 Q75L30 129 aa7.88□□□□□ -1.15
PCDHGA3-202ENST00000612467 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
PCDHGA3-202ENST00000612467 ATP11AUNQ6ZP68 121 aa7.87□□□□□ -1.15
PCDHGA3-202ENST00000612467 LINC00304Q8N9R0 145 aa7.86□□□□□ -1.15
PCDHGA3-202ENST00000612467 A0A1B0GVY2 172 aa7.85□□□□□ -1.15
PCDHGA3-202ENST00000612467 SPINK1P00995 79 aa7.85□□□□□ -1.15
PCDHGA3-202ENST00000612467 SPINK7P58062 85 aa7.84□□□□□ -1.15
PCDHGA3-202ENST00000612467 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
PCDHGA3-202ENST00000612467 C9orf92A6NGG3 77 aa7.82□□□□□ -1.16
PCDHGA3-202ENST00000612467 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
PCDHGA3-202ENST00000612467 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
PCDHGA3-202ENST00000612467 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
PCDHGA3-202ENST00000612467 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
PCDHGA3-202ENST00000612467 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
PCDHGA3-202ENST00000612467 ACYP2P14621 99 aa7.78□□□□□ -1.16
PCDHGA3-202ENST00000612467 C7orf65Q6ZTY9 151 aa7.75□□□□□ -1.17
PCDHGA3-202ENST00000612467 RYR3Q15413 4870 aa7.75□□□□□ -1.17
PCDHGA3-202ENST00000612467 PRAC1Q96KF2 57 aa7.74□□□□□ -1.17
PCDHGA3-202ENST00000612467 H3BS24 57 aa7.74□□□□□ -1.17
PCDHGA3-202ENST00000612467 Q8N1X5 172 aa7.73□□□□□ -1.17
PCDHGA3-202ENST00000612467 ADM2Q7Z4H4 148 aa7.72□□□□□ -1.17
PCDHGA3-202ENST00000612467 FLG2Q5D862 2391 aaPredicted RBP7.7□□□□□ -1.18
PCDHGA3-202ENST00000612467 HSPG2P98160 4391 aa7.68□□□□□ -1.18
PCDHGA3-202ENST00000612467 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
PCDHGA3-202ENST00000612467 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
PCDHGA3-202ENST00000612467 TNXBP22105 4242 aa7.65□□□□□ -1.18
PCDHGA3-202ENST00000612467 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
PCDHGA3-202ENST00000612467 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
PCDHGA3-202ENST00000612467 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
PCDHGA3-202ENST00000612467 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
PCDHGA3-202ENST00000612467 A0A1B0GU69 56 aa7.59□□□□□ -1.19
PCDHGA3-202ENST00000612467 A8MUU9 505 aa7.58□□□□□ -1.2
PCDHGA3-202ENST00000612467 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
PCDHGA3-202ENST00000612467 RYR1P21817 5038 aa7.56□□□□□ -1.2
PCDHGA3-202ENST00000612467 Q5VSD8 79 aa7.54□□□□□ -1.2
PCDHGA3-202ENST00000612467 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
PCDHGA3-202ENST00000612467 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
PCDHGA3-202ENST00000612467 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms