RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 LINC00472Q9H8W2 130 aa8.88□□□□□ -0.99
SSBP1-215ENST00000612337 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
SSBP1-215ENST00000612337 KRTAP9-7A8MTY7 169 aa8.87□□□□□ -0.99
SSBP1-215ENST00000612337 HRES1P13985 223 aa8.87□□□□□ -0.99
SSBP1-215ENST00000612337 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
SSBP1-215ENST00000612337 DEFB116Q30KQ4 102 aa8.86□□□□□ -0.99
SSBP1-215ENST00000612337 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-215ENST00000612337 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
SSBP1-215ENST00000612337 M0R143 59 aa8.84□□□□□ -0.99
SSBP1-215ENST00000612337 DSCR8Q96T75 97 aa8.84□□□□□ -0.99
SSBP1-215ENST00000612337 IGHV6-1A0A0B4J1U7 121 aa8.83□□□□□ -1
SSBP1-215ENST00000612337 H3BS24 57 aa8.82□□□□□ -1
SSBP1-215ENST00000612337 MT1FP04733 61 aa8.82□□□□□ -1
SSBP1-215ENST00000612337 VPS25Q9BRG1 176 aa8.82□□□□□ -1
SSBP1-215ENST00000612337 SMIM6P0DI80 62 aa8.8□□□□□ -1
SSBP1-215ENST00000612337 ATXN8Q156A1 80 aa8.79□□□□□ -1
SSBP1-215ENST00000612337 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
SSBP1-215ENST00000612337 C9JAW5 83 aa8.78□□□□□ -1
SSBP1-215ENST00000612337 C8orf87E5RJ46 101 aa8.78□□□□□ -1
SSBP1-215ENST00000612337 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
SSBP1-215ENST00000612337 A0A1B0GVX0 72 aa8.76□□□□□ -1.01
SSBP1-215ENST00000612337 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
SSBP1-215ENST00000612337 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
SSBP1-215ENST00000612337 Q6ZQT0 140 aa8.73□□□□□ -1.01
SSBP1-215ENST00000612337 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
SSBP1-215ENST00000612337 MTURNQ8N3F0 131 aa8.73□□□□□ -1.01
SSBP1-215ENST00000612337 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
SSBP1-215ENST00000612337 J3KT08 172 aa8.71□□□□□ -1.02
SSBP1-215ENST00000612337 ZCCHC13Q8WW36 166 aaKnown RBP8.71□□□□□ -1.02
SSBP1-215ENST00000612337 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
SSBP1-215ENST00000612337 TSTD3H0UI37 97 aa8.7□□□□□ -1.02
SSBP1-215ENST00000612337 A0A1B0GW54 56 aa8.68□□□□□ -1.02
SSBP1-215ENST00000612337 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
SSBP1-215ENST00000612337 PDE6GP18545 87 aa8.67□□□□□ -1.02
SSBP1-215ENST00000612337 SPINK7P58062 85 aa8.67□□□□□ -1.02
SSBP1-215ENST00000612337 BATFQ16520 125 aa8.65□□□□□ -1.02
SSBP1-215ENST00000612337 C14orf132Q9NPU4 83 aa8.64□□□□□ -1.03
SSBP1-215ENST00000612337 NDUFB1O75438 58 aa8.63□□□□□ -1.03
SSBP1-215ENST00000612337 Q8N9P0 234 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-215ENST00000612337 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
SSBP1-215ENST00000612337 LOC105371267A0A1B0GV96 52 aa8.62□□□□□ -1.03
SSBP1-215ENST00000612337 MACF1Q9UPN3 7388 aaKnown RBP8.61□□□□□ -1.03
SSBP1-215ENST00000612337 A8MWP4 228 aa8.6□□□□□ -1.03
SSBP1-215ENST00000612337 C9orf118A6NHY6 69 aa8.59□□□□□ -1.03
SSBP1-215ENST00000612337 SYNE2Q8WXH0 6885 aaKnown RBP8.59□□□□□ -1.03
SSBP1-215ENST00000612337 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
SSBP1-215ENST00000612337 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
SSBP1-215ENST00000612337 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
SSBP1-215ENST00000612337 WFDC13Q8IUB5 93 aa8.56□□□□□ -1.04
SSBP1-215ENST00000612337 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
SSBP1-215ENST00000612337 NREPQ16612 68 aa8.55□□□□□ -1.04
SSBP1-215ENST00000612337 LINC00846Q9NV44 126 aa8.55□□□□□ -1.04
SSBP1-215ENST00000612337 H3BT86 120 aa8.54□□□□□ -1.04
SSBP1-215ENST00000612337 KRTAP19-6Q3LI70 58 aa8.53□□□□□ -1.04
SSBP1-215ENST00000612337 PRR15Q8IV56 129 aa8.52□□□□□ -1.05
SSBP1-215ENST00000612337 Q6ZVQ6 151 aa8.5□□□□□ -1.05
SSBP1-215ENST00000612337 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
SSBP1-215ENST00000612337 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
SSBP1-215ENST00000612337 MRPL34Q9BQ48 92 aaKnown RBP8.42□□□□□ -1.06
SSBP1-215ENST00000612337 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
SSBP1-215ENST00000612337 K7EQZ3 153 aa8.41□□□□□ -1.06
SSBP1-215ENST00000612337 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
SSBP1-215ENST00000612337 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
SSBP1-215ENST00000612337 KRTAP4-12Q9BQ66 201 aa8.4□□□□□ -1.06
SSBP1-215ENST00000612337 BPY2O14599 106 aa8.39□□□□□ -1.07
SSBP1-215ENST00000612337 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
SSBP1-215ENST00000612337 NDUFS5O43920 106 aa8.34□□□□□ -1.07
SSBP1-215ENST00000612337 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
SSBP1-215ENST00000612337 Q8N9L7 120 aa8.29□□□□□ -1.08
SSBP1-215ENST00000612337 IGKV2D-30A0A075B6S6 120 aa8.28□□□□□ -1.08
SSBP1-215ENST00000612337 K7EP34 96 aa8.28□□□□□ -1.08
SSBP1-215ENST00000612337 IGKV2-30P06310 120 aa8.28□□□□□ -1.08
SSBP1-215ENST00000612337 KRTAP6-3Q3LI67 103 aa8.27□□□□□ -1.09
SSBP1-215ENST00000612337 Q5W150 140 aa8.27□□□□□ -1.09
SSBP1-215ENST00000612337 CASC2Q6XLA1 102 aa8.27□□□□□ -1.09
SSBP1-215ENST00000612337 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.09
SSBP1-215ENST00000612337 LCE3BQ5TA77 95 aa8.25□□□□□ -1.09
SSBP1-215ENST00000612337 UBL5Q9BZL1 73 aa8.23□□□□□ -1.09
SSBP1-215ENST00000612337 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
SSBP1-215ENST00000612337 CXCL6P80162 114 aa8.18□□□□□ -1.1
SSBP1-215ENST00000612337 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
SSBP1-215ENST00000612337 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
SSBP1-215ENST00000612337 F8W1H4 67 aa8.14□□□□□ -1.11
SSBP1-215ENST00000612337 PCP4L1A6NKN8 68 aa8.11□□□□□ -1.11
SSBP1-215ENST00000612337 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
SSBP1-215ENST00000612337 NEBP20929 6669 aa8.1□□□□□ -1.11
SSBP1-215ENST00000612337 C5orf47Q569G3 176 aa8.09□□□□□ -1.11
SSBP1-215ENST00000612337 KRTAP9-9Q9BYP9 154 aa8.09□□□□□ -1.11
SSBP1-215ENST00000612337 KRTAP9-4Q9BYQ2 154 aa8.09□□□□□ -1.11
SSBP1-215ENST00000612337 MUC12Q9UKN1 5478 aa8.08□□□□□ -1.12
SSBP1-215ENST00000612337 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
SSBP1-215ENST00000612337 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
SSBP1-215ENST00000612337 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
SSBP1-215ENST00000612337 A6NN06 94 aa8.04□□□□□ -1.12
SSBP1-215ENST00000612337 S4R3F8 94 aa8.04□□□□□ -1.12
SSBP1-215ENST00000612337 MT1BP07438 61 aa8.03□□□□□ -1.12
SSBP1-215ENST00000612337 TP53AIP1Q9HCN2 124 aa8.03□□□□□ -1.12
SSBP1-215ENST00000612337 Q5VV11 94 aa8.01□□□□□ -1.13
SSBP1-215ENST00000612337 CSAG1Q6PB30 78 aa8.01□□□□□ -1.13
SSBP1-215ENST00000612337 KRTAP19-8Q3LI54 63 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms