RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 KRTAP9-3Q9BYQ3 159 aa12.07□□□□□ -0.48
CDKN3-211ENST00000611205 DNAL4O96015 105 aa12.06□□□□□ -0.48
CDKN3-211ENST00000611205 HSD52Q0P140 79 aa12.06□□□□□ -0.48
CDKN3-211ENST00000611205 IGHV6-1A0A0B4J1U7 121 aa12.04□□□□□ -0.48
CDKN3-211ENST00000611205 ORMDL1Q9P0S3 153 aa12.04□□□□□ -0.48
CDKN3-211ENST00000611205 PSMB2P49721 201 aa12.02□□□□□ -0.49
CDKN3-211ENST00000611205 COX6CP09669 75 aa12.01□□□□□ -0.49
CDKN3-211ENST00000611205 LINC00472Q9H8W2 130 aa12.01□□□□□ -0.49
CDKN3-211ENST00000611205 TMEM256-PLSCR3K7ERE1 68 aa12□□□□□ -0.49
CDKN3-211ENST00000611205 K7ERJ3 54 aa11.98□□□□□ -0.49
CDKN3-211ENST00000611205 TRACP01848 142 aa11.98□□□□□ -0.49
CDKN3-211ENST00000611205 CCKP06307 115 aa11.98□□□□□ -0.49
CDKN3-211ENST00000611205 UBE2V1Q13404 147 aa11.98□□□□□ -0.49
CDKN3-211ENST00000611205 TAX1BP3O14907 124 aa11.95□□□□□ -0.5
CDKN3-211ENST00000611205 MTURNQ8N3F0 131 aa11.95□□□□□ -0.5
CDKN3-211ENST00000611205 A0A1B0GVX0 72 aa11.9□□□□□ -0.5
CDKN3-211ENST00000611205 C8orf87E5RJ46 101 aa11.9□□□□□ -0.5
CDKN3-211ENST00000611205 VPS25Q9BRG1 176 aa11.89□□□□□ -0.51
CDKN3-211ENST00000611205 GTF2H5Q6ZYL4 71 aa11.88□□□□□ -0.51
CDKN3-211ENST00000611205 C9orf118A6NHY6 69 aa11.86□□□□□ -0.51
CDKN3-211ENST00000611205 ZCCHC13Q8WW36 166 aaKnown RBP11.86□□□□□ -0.51
CDKN3-211ENST00000611205 MACF1Q9UPN3 7388 aaKnown RBP11.84□□□□□ -0.51
CDKN3-211ENST00000611205 SPINK7P58062 85 aa11.84□□□□□ -0.51
CDKN3-211ENST00000611205 LINC00846Q9NV44 126 aa11.84□□□□□ -0.51
CDKN3-211ENST00000611205 SYNE2Q8WXH0 6885 aaKnown RBP11.83□□□□□ -0.52
CDKN3-211ENST00000611205 SCGB1C2P0DMR2 95 aa11.82□□□□□ -0.52
CDKN3-211ENST00000611205 RBM3P98179 157 aaKnown RBP11.8□□□□□ -0.52
CDKN3-211ENST00000611205 K7EP34 96 aa11.78□□□□□ -0.52
CDKN3-211ENST00000611205 DSCR8Q96T75 97 aa11.78□□□□□ -0.52
CDKN3-211ENST00000611205 KRTAP19-6Q3LI70 58 aa11.77□□□□□ -0.53
CDKN3-211ENST00000611205 A0A1W2PPM0 123 aa11.76□□□□□ -0.53
CDKN3-211ENST00000611205 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
CDKN3-211ENST00000611205 A8MWP4 228 aa11.74□□□□□ -0.53
CDKN3-211ENST00000611205 J3KT08 172 aa11.74□□□□□ -0.53
CDKN3-211ENST00000611205 BAALC-AS2P0C853 105 aa11.72□□□□□ -0.53
CDKN3-211ENST00000611205 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
CDKN3-211ENST00000611205 K7ERU9 68 aa11.71□□□□□ -0.53
CDKN3-211ENST00000611205 C9JAW5 83 aa11.7□□□□□ -0.54
CDKN3-211ENST00000611205 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
CDKN3-211ENST00000611205 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
CDKN3-211ENST00000611205 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
CDKN3-211ENST00000611205 NDUFB1O75438 58 aa11.68□□□□□ -0.54
CDKN3-211ENST00000611205 Q6ZQT0 140 aa11.65□□□□□ -0.54
CDKN3-211ENST00000611205 C8orf17Q9NRJ1 99 aa11.62□□□□□ -0.55
CDKN3-211ENST00000611205 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
CDKN3-211ENST00000611205 A0A1B0GW54 56 aa11.6□□□□□ -0.55
CDKN3-211ENST00000611205 F8W1H4 67 aa11.6□□□□□ -0.55
CDKN3-211ENST00000611205 JMJD7-PLA2G4BH0Y9G9 81 aa11.6□□□□□ -0.55
CDKN3-211ENST00000611205 LOC110117498A0A087WWA1 95 aa11.56□□□□□ -0.56
CDKN3-211ENST00000611205 J3QR89 54 aa11.55□□□□□ -0.56
CDKN3-211ENST00000611205 PDE6GP18545 87 aa11.55□□□□□ -0.56
CDKN3-211ENST00000611205 IGKV3D-7A0A0C4DH55 119 aa11.53□□□□□ -0.56
CDKN3-211ENST00000611205 Q6ZVQ6 151 aa11.53□□□□□ -0.56
CDKN3-211ENST00000611205 NAA38Q9BRA0 125 aaKnown RBP11.53□□□□□ -0.56
CDKN3-211ENST00000611205 KRTAP6-3Q3LI67 103 aa11.47□□□□□ -0.57
CDKN3-211ENST00000611205 H1FX-AS1Q4G0G2 97 aa11.46□□□□□ -0.57
CDKN3-211ENST00000611205 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
CDKN3-211ENST00000611205 PRR15Q8IV56 129 aa11.43□□□□□ -0.58
CDKN3-211ENST00000611205 PRO0461Q9UI25 63 aa11.43□□□□□ -0.58
CDKN3-211ENST00000611205 MRPL34Q9BQ48 92 aaKnown RBP11.41□□□□□ -0.58
CDKN3-211ENST00000611205 MMP24-AS1A0A0U1RRL7 71 aa11.39□□□□□ -0.59
CDKN3-211ENST00000611205 TMEM254Q8TBM7 123 aa11.39□□□□□ -0.59
CDKN3-211ENST00000611205 NREPQ16612 68 aa11.38□□□□□ -0.59
CDKN3-211ENST00000611205 PCP4P48539 62 aa11.37□□□□□ -0.59
CDKN3-211ENST00000611205 NDUFS5O43920 106 aa11.36□□□□□ -0.59
CDKN3-211ENST00000611205 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
CDKN3-211ENST00000611205 SCGB1A1P11684 91 aa11.32□□□□□ -0.6
CDKN3-211ENST00000611205 IGKV2D-30A0A075B6S6 120 aa11.31□□□□□ -0.6
CDKN3-211ENST00000611205 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
CDKN3-211ENST00000611205 IGKV2-30P06310 120 aa11.31□□□□□ -0.6
CDKN3-211ENST00000611205 H3BT86 120 aa11.28□□□□□ -0.6
CDKN3-211ENST00000611205 K7EQZ3 153 aa11.27□□□□□ -0.61
CDKN3-211ENST00000611205 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
CDKN3-211ENST00000611205 C7orf65Q6ZTY9 151 aa11.25□□□□□ -0.61
CDKN3-211ENST00000611205 Q5W150 140 aa11.2□□□□□ -0.62
CDKN3-211ENST00000611205 BPY2O14599 106 aa11.16□□□□□ -0.62
CDKN3-211ENST00000611205 C4orf26Q17RF5 130 aa11.14□□□□□ -0.63
CDKN3-211ENST00000611205 FAM236AA0A1B0GUQ0 79 aa11.13□□□□□ -0.63
CDKN3-211ENST00000611205 FAM236BA0A1B0GV22 79 aa11.13□□□□□ -0.63
CDKN3-211ENST00000611205 A6NN06 94 aa11.12□□□□□ -0.63
CDKN3-211ENST00000611205 NEBP20929 6669 aa11.11□□□□□ -0.63
CDKN3-211ENST00000611205 FAM240AA0A1B0GVK7 77 aa11.11□□□□□ -0.63
CDKN3-211ENST00000611205 C5orf47Q569G3 176 aa11.11□□□□□ -0.63
CDKN3-211ENST00000611205 HCG22E2RYF7 251 aa11.08□□□□□ -0.64
CDKN3-211ENST00000611205 CASC2Q6XLA1 102 aa11.06□□□□□ -0.64
CDKN3-211ENST00000611205 ACYP1P07311 99 aa11.05□□□□□ -0.64
CDKN3-211ENST00000611205 MT1BP07438 61 aa11.04□□□□□ -0.64
CDKN3-211ENST00000611205 Q8N9L7 120 aa11.04□□□□□ -0.64
CDKN3-211ENST00000611205 Q5VV11 94 aa11.03□□□□□ -0.64
CDKN3-211ENST00000611205 S4R3F8 94 aa10.98□□□□□ -0.65
CDKN3-211ENST00000611205 CXCL6P80162 114 aa10.97□□□□□ -0.65
CDKN3-211ENST00000611205 MUC12Q9UKN1 5478 aa10.95□□□□□ -0.66
CDKN3-211ENST00000611205 MT-ATP8P03928 68 aa10.93□□□□□ -0.66
CDKN3-211ENST00000611205 KRTAP19-8Q3LI54 63 aa10.93□□□□□ -0.66
CDKN3-211ENST00000611205 CSAG1Q6PB30 78 aa10.93□□□□□ -0.66
CDKN3-211ENST00000611205 KRTAP3-1Q9BYR8 98 aa10.93□□□□□ -0.66
CDKN3-211ENST00000611205 SPRR2GQ9BYE4 73 aa10.92□□□□□ -0.66
CDKN3-211ENST00000611205 UBL5Q9BZL1 73 aa10.9□□□□□ -0.66
CDKN3-211ENST00000611205 IMUPQ9GZP8 106 aa10.89□□□□□ -0.67
CDKN3-211ENST00000611205 LCA10Q71F78 164 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms