RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 A0A1B0GU33 70 aa8.69□□□□□ -1.02
VPS36-207ENST00000611132 A0A087X002 238 aa8.68□□□□□ -1.02
VPS36-207ENST00000611132 NOTCH2NLQ7Z3S9 236 aa8.68□□□□□ -1.02
VPS36-207ENST00000611132 SMG1Q96Q15 3661 aaKnown RBP8.67□□□□□ -1.02
VPS36-207ENST00000611132 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
VPS36-207ENST00000611132 H3BS24 57 aa8.64□□□□□ -1.03
VPS36-207ENST00000611132 LAMA5O15230 3695 aa8.64□□□□□ -1.03
VPS36-207ENST00000611132 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
VPS36-207ENST00000611132 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
VPS36-207ENST00000611132 A0A0D9SG42 100 aa8.57□□□□□ -1.04
VPS36-207ENST00000611132 KRTAP13-1Q8IUC0 172 aa8.56□□□□□ -1.04
VPS36-207ENST00000611132 KMT2BQ9UMN6 2715 aaPredicted RBP8.55□□□□□ -1.04
VPS36-207ENST00000611132 SMR3BP02814 79 aaPredicted RBP8.53□□□□□ -1.04
VPS36-207ENST00000611132 CELSR1Q9NYQ6 3014 aa8.52□□□□□ -1.05
VPS36-207ENST00000611132 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
VPS36-207ENST00000611132 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
VPS36-207ENST00000611132 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
VPS36-207ENST00000611132 SVEP1Q4LDE5 3571 aa8.41□□□□□ -1.06
VPS36-207ENST00000611132 SPENQ96T58 3664 aaKnown RBP8.4□□□□□ -1.06
VPS36-207ENST00000611132 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.07
VPS36-207ENST00000611132 TENM3Q9P273 2699 aa8.38□□□□□ -1.07
VPS36-207ENST00000611132 KRTAP10-2P60368 255 aa8.36□□□□□ -1.07
VPS36-207ENST00000611132 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
VPS36-207ENST00000611132 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
VPS36-207ENST00000611132 RPL37P61927 97 aaKnown RBP8.32□□□□□ -1.08
VPS36-207ENST00000611132 ROMO1P60602 79 aa8.31□□□□□ -1.08
VPS36-207ENST00000611132 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
VPS36-207ENST00000611132 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
VPS36-207ENST00000611132 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
VPS36-207ENST00000611132 S4R3F8 94 aa8.22□□□□□ -1.09
VPS36-207ENST00000611132 VWFP04275 2813 aa8.22□□□□□ -1.09
VPS36-207ENST00000611132 CUBNO60494 3623 aa8.22□□□□□ -1.09
VPS36-207ENST00000611132 TENM1Q9UKZ4 2725 aa8.21□□□□□ -1.1
VPS36-207ENST00000611132 PDZD2O15018 2839 aa8.19□□□□□ -1.1
VPS36-207ENST00000611132 RPS29P62273 56 aaKnown RBP8.12□□□□□ -1.11
VPS36-207ENST00000611132 LUZP6Q538Z0 58 aa8.09□□□□□ -1.11
VPS36-207ENST00000611132 Q6ZSA8 131 aa8.09□□□□□ -1.11
VPS36-207ENST00000611132 TENM4Q6N022 2769 aa8.08□□□□□ -1.12
VPS36-207ENST00000611132 KRTAP13-3Q3SY46 172 aa8.07□□□□□ -1.12
VPS36-207ENST00000611132 TGP01266 2768 aa8.05□□□□□ -1.12
VPS36-207ENST00000611132 PKD1L1Q8TDX9 2849 aa8.04□□□□□ -1.12
VPS36-207ENST00000611132 A8MUU9 505 aa8.03□□□□□ -1.12
VPS36-207ENST00000611132 BSNQ9UPA5 3926 aa8.03□□□□□ -1.12
VPS36-207ENST00000611132 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
VPS36-207ENST00000611132 H0YAA0 97 aa8□□□□□ -1.13
VPS36-207ENST00000611132 R4GN34 69 aa7.97□□□□□ -1.13
VPS36-207ENST00000611132 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.13
VPS36-207ENST00000611132 KRTAP1-4P0C5Y4 121 aa7.96□□□□□ -1.14
VPS36-207ENST00000611132 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.14
VPS36-207ENST00000611132 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
VPS36-207ENST00000611132 NDUFAF8A1L188 74 aa7.89□□□□□ -1.15
VPS36-207ENST00000611132 M0QZ58 72 aa7.89□□□□□ -1.15
VPS36-207ENST00000611132 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
VPS36-207ENST00000611132 J3QL48 77 aa7.87□□□□□ -1.15
VPS36-207ENST00000611132 SRRM2Q9UQ35 2752 aaKnown RBP7.85□□□□□ -1.15
VPS36-207ENST00000611132 CSMD2Q7Z408 3487 aa7.84□□□□□ -1.15
VPS36-207ENST00000611132 A0A0A0MQY5 61 aa7.84□□□□□ -1.15
VPS36-207ENST00000611132 Q5VSD8 79 aa7.82□□□□□ -1.16
VPS36-207ENST00000611132 NBPF19A0A087WUL8 3843 aa7.81□□□□□ -1.16
VPS36-207ENST00000611132 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
VPS36-207ENST00000611132 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
VPS36-207ENST00000611132 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
VPS36-207ENST00000611132 ANK3Q12955 4377 aaKnown RBP7.72□□□□□ -1.17
VPS36-207ENST00000611132 VPS13CQ709C8 3753 aa7.7□□□□□ -1.18
VPS36-207ENST00000611132 SEC61BP60468 96 aaKnown RBP7.69□□□□□ -1.18
VPS36-207ENST00000611132 TRRAPQ9Y4A5 3859 aa7.68□□□□□ -1.18
VPS36-207ENST00000611132 FBN3Q75N90 2809 aa7.66□□□□□ -1.18
VPS36-207ENST00000611132 P0C880 135 aa7.55□□□□□ -1.2
VPS36-207ENST00000611132 XP32Q5T750 250 aa7.55□□□□□ -1.2
VPS36-207ENST00000611132 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
VPS36-207ENST00000611132 MEGF8Q7Z7M0 2845 aa7.49□□□□□ -1.21
VPS36-207ENST00000611132 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
VPS36-207ENST00000611132 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
VPS36-207ENST00000611132 M0R2T5 61 aa7.4□□□□□ -1.22
VPS36-207ENST00000611132 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
VPS36-207ENST00000611132 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
VPS36-207ENST00000611132 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
VPS36-207ENST00000611132 ZNF469Q96JG9 3925 aaPredicted RBP7.36□□□□□ -1.23
VPS36-207ENST00000611132 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
VPS36-207ENST00000611132 TNP1P09430 55 aa7.31□□□□□ -1.24
VPS36-207ENST00000611132 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
VPS36-207ENST00000611132 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
VPS36-207ENST00000611132 KRTAP12-1P59990 96 aa7.29□□□□□ -1.24
VPS36-207ENST00000611132 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
VPS36-207ENST00000611132 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
VPS36-207ENST00000611132 CSMD3Q7Z407 3707 aa7.2□□□□□ -1.26
VPS36-207ENST00000611132 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
VPS36-207ENST00000611132 KRTAP21-3Q3LHN1 58 aa7.14□□□□□ -1.27
VPS36-207ENST00000611132 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
VPS36-207ENST00000611132 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
VPS36-207ENST00000611132 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
VPS36-207ENST00000611132 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
VPS36-207ENST00000611132 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
VPS36-207ENST00000611132 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
VPS36-207ENST00000611132 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
VPS36-207ENST00000611132 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
VPS36-207ENST00000611132 ALMS1Q8TCU4 4167 aa6.78□□□□□ -1.32
VPS36-207ENST00000611132 DNAH11Q96DT5 4516 aa6.75□□□□□ -1.33
VPS36-207ENST00000611132 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
VPS36-207ENST00000611132 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms