RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 LINC01558Q9Y6Z2 57 aa11.52□□□□□ -0.56
SEMA3B-210ENST00000611067 KRTAP13-1Q8IUC0 172 aa11.52□□□□□ -0.57
SEMA3B-210ENST00000611067 PANO1I0J062 215 aa11.51□□□□□ -0.57
SEMA3B-210ENST00000611067 SPACA4Q8TDM5 124 aa11.51□□□□□ -0.57
SEMA3B-210ENST00000611067 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
SEMA3B-210ENST00000611067 CDC42SE1Q9NRR8 79 aa11.51□□□□□ -0.57
SEMA3B-210ENST00000611067 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
SEMA3B-210ENST00000611067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.49□□□□□ -0.57
SEMA3B-210ENST00000611067 SPAG11AQ6PDA7 123 aa11.46□□□□□ -0.57
SEMA3B-210ENST00000611067 IGLV9-49A0A0B4J1Y8 123 aa11.45□□□□□ -0.58
SEMA3B-210ENST00000611067 A6NN06 94 aa11.45□□□□□ -0.58
SEMA3B-210ENST00000611067 HECTD4Q9Y4D8 3996 aa11.45□□□□□ -0.58
SEMA3B-210ENST00000611067 A0A1B0GVX0 72 aa11.43□□□□□ -0.58
SEMA3B-210ENST00000611067 NDUFS5O43920 106 aa11.43□□□□□ -0.58
SEMA3B-210ENST00000611067 DNAH17Q9UFH2 4485 aa11.42□□□□□ -0.58
SEMA3B-210ENST00000611067 HRES1P13985 223 aa11.42□□□□□ -0.58
SEMA3B-210ENST00000611067 IGHV6-1A0A0B4J1U7 121 aa11.41□□□□□ -0.58
SEMA3B-210ENST00000611067 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.58
SEMA3B-210ENST00000611067 LINC00483Q53H64 154 aa11.39□□□□□ -0.59
SEMA3B-210ENST00000611067 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
SEMA3B-210ENST00000611067 KRTAP10-2P60368 255 aa11.38□□□□□ -0.59
SEMA3B-210ENST00000611067 FRAS1Q86XX4 4008 aa11.37□□□□□ -0.59
SEMA3B-210ENST00000611067 CDK2AP2O75956 126 aa11.37□□□□□ -0.59
SEMA3B-210ENST00000611067 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
SEMA3B-210ENST00000611067 SPINK7P58062 85 aa11.33□□□□□ -0.6
SEMA3B-210ENST00000611067 ZNF706Q9Y5V0 76 aaPredicted RBP11.3□□□□□ -0.6
SEMA3B-210ENST00000611067 A0A087X002 238 aa11.3□□□□□ -0.6
SEMA3B-210ENST00000611067 NOTCH2NLQ7Z3S9 236 aa11.3□□□□□ -0.6
SEMA3B-210ENST00000611067 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
SEMA3B-210ENST00000611067 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
SEMA3B-210ENST00000611067 DNAH11Q96DT5 4516 aa11.24□□□□□ -0.61
SEMA3B-210ENST00000611067 FAT2Q9NYQ8 4349 aa11.24□□□□□ -0.61
SEMA3B-210ENST00000611067 SACSQ9NZJ4 4579 aa11.24□□□□□ -0.61
SEMA3B-210ENST00000611067 CIRBP-AS1Q8TBR5 109 aa11.23□□□□□ -0.61
SEMA3B-210ENST00000611067 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
SEMA3B-210ENST00000611067 KRTAP10-1P60331 282 aa11.23□□□□□ -0.61
SEMA3B-210ENST00000611067 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
SEMA3B-210ENST00000611067 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
SEMA3B-210ENST00000611067 Q5W150 140 aa11.21□□□□□ -0.61
SEMA3B-210ENST00000611067 Q6ZSA8 131 aa11.21□□□□□ -0.61
SEMA3B-210ENST00000611067 PKD1P98161 4303 aa11.19□□□□□ -0.62
SEMA3B-210ENST00000611067 ANAPC11Q9NYG5 84 aa11.19□□□□□ -0.62
SEMA3B-210ENST00000611067 ACYP2P14621 99 aa11.18□□□□□ -0.62
SEMA3B-210ENST00000611067 DNAH8Q96JB1 4490 aa11.17□□□□□ -0.62
SEMA3B-210ENST00000611067 ZNF861PO60384 105 aa11.16□□□□□ -0.62
SEMA3B-210ENST00000611067 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
SEMA3B-210ENST00000611067 IGLV7-43P04211 117 aa11.12□□□□□ -0.63
SEMA3B-210ENST00000611067 DMAC1Q96GE9 116 aa11.09□□□□□ -0.63
SEMA3B-210ENST00000611067 C8orf87E5RJ46 101 aa11.07□□□□□ -0.64
SEMA3B-210ENST00000611067 A0A1B0GVY2 172 aa11.05□□□□□ -0.64
SEMA3B-210ENST00000611067 RYR2Q92736 4967 aa11.04□□□□□ -0.64
SEMA3B-210ENST00000611067 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
SEMA3B-210ENST00000611067 LINC00313P59037 77 aa11.01□□□□□ -0.65
SEMA3B-210ENST00000611067 PKHD1P08F94 4074 aa11□□□□□ -0.65
SEMA3B-210ENST00000611067 A0A1B0GU69 56 aa11□□□□□ -0.65
SEMA3B-210ENST00000611067 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
SEMA3B-210ENST00000611067 SSBP3-AS1Q7Z2R9 100 aa10.96□□□□□ -0.65
SEMA3B-210ENST00000611067 SPATA8Q6RVD6 105 aa10.95□□□□□ -0.66
SEMA3B-210ENST00000611067 PLA2G1BP04054 148 aaKnown RBP10.95□□□□□ -0.66
SEMA3B-210ENST00000611067 IGKV2-30P06310 120 aa10.95□□□□□ -0.66
SEMA3B-210ENST00000611067 LRP1BQ9NZR2 4599 aa10.94□□□□□ -0.66
SEMA3B-210ENST00000611067 PRAC1Q96KF2 57 aa10.91□□□□□ -0.66
SEMA3B-210ENST00000611067 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
SEMA3B-210ENST00000611067 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
SEMA3B-210ENST00000611067 UQCR11O14957 56 aa10.86□□□□□ -0.67
SEMA3B-210ENST00000611067 MIR22HGQ0VDD5 57 aa10.86□□□□□ -0.67
SEMA3B-210ENST00000611067 ADM2Q7Z4H4 148 aa10.86□□□□□ -0.67
SEMA3B-210ENST00000611067 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
SEMA3B-210ENST00000611067 VPS13BQ7Z7G8 4022 aa10.84□□□□□ -0.67
SEMA3B-210ENST00000611067 KRTAP16-1A8MUX0 517 aa10.81□□□□□ -0.68
SEMA3B-210ENST00000611067 KRTAP1-4P0C5Y4 121 aa10.77□□□□□ -0.69
SEMA3B-210ENST00000611067 KRTAP13-2Q52LG2 175 aa10.74□□□□□ -0.69
SEMA3B-210ENST00000611067 APOBP04114 4563 aaKnown RBP10.74□□□□□ -0.69
SEMA3B-210ENST00000611067 RYR3Q15413 4870 aa10.74□□□□□ -0.69
SEMA3B-210ENST00000611067 LINC01554Q52M75 96 aa10.74□□□□□ -0.69
SEMA3B-210ENST00000611067 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
SEMA3B-210ENST00000611067 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
SEMA3B-210ENST00000611067 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
SEMA3B-210ENST00000611067 FAT1Q14517 4588 aa10.62□□□□□ -0.71
SEMA3B-210ENST00000611067 C4orf48Q5BLP8 95 aa10.6□□□□□ -0.71
SEMA3B-210ENST00000611067 CSAG1Q6PB30 78 aa10.56□□□□□ -0.72
SEMA3B-210ENST00000611067 Q5VSD8 79 aa10.54□□□□□ -0.72
SEMA3B-210ENST00000611067 SPINK1P00995 79 aa10.53□□□□□ -0.72
SEMA3B-210ENST00000611067 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.73
SEMA3B-210ENST00000611067 Q8N1X5 172 aa10.5□□□□□ -0.73
SEMA3B-210ENST00000611067 HSPG2P98160 4391 aa10.47□□□□□ -0.73
SEMA3B-210ENST00000611067 RPS29P62273 56 aaKnown RBP10.44□□□□□ -0.74
SEMA3B-210ENST00000611067 RYR1P21817 5038 aa10.43□□□□□ -0.74
SEMA3B-210ENST00000611067 H0YAA0 97 aa10.4□□□□□ -0.74
SEMA3B-210ENST00000611067 A8MUU9 505 aa10.38□□□□□ -0.75
SEMA3B-210ENST00000611067 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
SEMA3B-210ENST00000611067 EPPK1P58107 5090 aaKnown RBP10.37□□□□□ -0.75
SEMA3B-210ENST00000611067 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
SEMA3B-210ENST00000611067 KRTAP17-1Q9BYP8 105 aa10.32□□□□□ -0.76
SEMA3B-210ENST00000611067 A0A1B0GU33 70 aa10.3□□□□□ -0.76
SEMA3B-210ENST00000611067 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
SEMA3B-210ENST00000611067 KRTAP25-1Q3LHN0 102 aa10.26□□□□□ -0.77
SEMA3B-210ENST00000611067 H1FX-AS1Q4G0G2 97 aa10.24□□□□□ -0.77
SEMA3B-210ENST00000611067 KRTAP3-1Q9BYR8 98 aa10.24□□□□□ -0.77
SEMA3B-210ENST00000611067 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms