RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
LINC01278-204ENST00000609143 CDK2AP2O75956 126 aa6.71□□□□□ -1.33
LINC01278-204ENST00000609143 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.33
LINC01278-204ENST00000609143 TRAV22A0A0B4J277 110 aa6.71□□□□□ -1.34
LINC01278-204ENST00000609143 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
LINC01278-204ENST00000609143 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
LINC01278-204ENST00000609143 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
LINC01278-204ENST00000609143 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
LINC01278-204ENST00000609143 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
LINC01278-204ENST00000609143 A0A1B0GVX0 72 aa6.68□□□□□ -1.34
LINC01278-204ENST00000609143 A8MU10 97 aa6.68□□□□□ -1.34
LINC01278-204ENST00000609143 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
LINC01278-204ENST00000609143 SMR3BP02814 79 aaPredicted RBP6.68□□□□□ -1.34
LINC01278-204ENST00000609143 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
LINC01278-204ENST00000609143 RYR2Q92736 4967 aa6.67□□□□□ -1.34
LINC01278-204ENST00000609143 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
LINC01278-204ENST00000609143 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
LINC01278-204ENST00000609143 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
LINC01278-204ENST00000609143 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
LINC01278-204ENST00000609143 A8MUN3 132 aa6.65□□□□□ -1.34
LINC01278-204ENST00000609143 TYMSOSQ8TAI1 123 aa6.64□□□□□ -1.35
LINC01278-204ENST00000609143 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
LINC01278-204ENST00000609143 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
LINC01278-204ENST00000609143 Q5VV11 94 aa6.63□□□□□ -1.35
LINC01278-204ENST00000609143 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
LINC01278-204ENST00000609143 MP68P56378 58 aa6.62□□□□□ -1.35
LINC01278-204ENST00000609143 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
LINC01278-204ENST00000609143 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
LINC01278-204ENST00000609143 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
LINC01278-204ENST00000609143 NDUFS5O43920 106 aa6.59□□□□□ -1.35
LINC01278-204ENST00000609143 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
LINC01278-204ENST00000609143 SPINK1P00995 79 aa6.59□□□□□ -1.35
LINC01278-204ENST00000609143 TP53AIP1Q9HCN2 124 aa6.59□□□□□ -1.35
LINC01278-204ENST00000609143 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
LINC01278-204ENST00000609143 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
LINC01278-204ENST00000609143 C8orf87E5RJ46 101 aa6.57□□□□□ -1.36
LINC01278-204ENST00000609143 H0Y9P7 68 aa6.57□□□□□ -1.36
LINC01278-204ENST00000609143 H3BPC8 53 aa6.57□□□□□ -1.36
LINC01278-204ENST00000609143 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
LINC01278-204ENST00000609143 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
LINC01278-204ENST00000609143 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
LINC01278-204ENST00000609143 PRR4Q16378 134 aa6.56□□□□□ -1.36
LINC01278-204ENST00000609143 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
LINC01278-204ENST00000609143 A6NN06 94 aa6.56□□□□□ -1.36
LINC01278-204ENST00000609143 LINC00208Q96KT6 92 aa6.56□□□□□ -1.36
LINC01278-204ENST00000609143 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
LINC01278-204ENST00000609143 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
LINC01278-204ENST00000609143 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
LINC01278-204ENST00000609143 RPS29P62273 56 aaKnown RBP6.54□□□□□ -1.36
LINC01278-204ENST00000609143 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
LINC01278-204ENST00000609143 LINC00313P59037 77 aa6.52□□□□□ -1.37
LINC01278-204ENST00000609143 LCA10Q71F78 164 aa6.52□□□□□ -1.37
LINC01278-204ENST00000609143 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
LINC01278-204ENST00000609143 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
LINC01278-204ENST00000609143 C7orf65Q6ZTY9 151 aa6.5□□□□□ -1.37
LINC01278-204ENST00000609143 Q75L30 129 aa6.47□□□□□ -1.37
LINC01278-204ENST00000609143 FAT1Q14517 4588 aa6.47□□□□□ -1.37
LINC01278-204ENST00000609143 A6NED7 52 aa6.46□□□□□ -1.37
LINC01278-204ENST00000609143 Q5VSD8 79 aa6.46□□□□□ -1.38
LINC01278-204ENST00000609143 H3BS24 57 aa6.45□□□□□ -1.38
LINC01278-204ENST00000609143 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
LINC01278-204ENST00000609143 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
LINC01278-204ENST00000609143 RYR3Q15413 4870 aa6.43□□□□□ -1.38
LINC01278-204ENST00000609143 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
LINC01278-204ENST00000609143 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
LINC01278-204ENST00000609143 Q5W150 140 aa6.42□□□□□ -1.38
LINC01278-204ENST00000609143 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
LINC01278-204ENST00000609143 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
LINC01278-204ENST00000609143 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
LINC01278-204ENST00000609143 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
LINC01278-204ENST00000609143 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
LINC01278-204ENST00000609143 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
LINC01278-204ENST00000609143 HSPG2P98160 4391 aa6.34□□□□□ -1.39
LINC01278-204ENST00000609143 Q8N1X5 172 aa6.34□□□□□ -1.4
LINC01278-204ENST00000609143 RYR1P21817 5038 aa6.33□□□□□ -1.4
LINC01278-204ENST00000609143 COA5Q86WW8 74 aa6.33□□□□□ -1.4
LINC01278-204ENST00000609143 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
LINC01278-204ENST00000609143 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
LINC01278-204ENST00000609143 C9orf92A6NGG3 77 aa6.3□□□□□ -1.4
LINC01278-204ENST00000609143 PRAC1Q96KF2 57 aa6.3□□□□□ -1.4
LINC01278-204ENST00000609143 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
LINC01278-204ENST00000609143 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
LINC01278-204ENST00000609143 SPINK7P58062 85 aa6.29□□□□□ -1.4
LINC01278-204ENST00000609143 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
LINC01278-204ENST00000609143 C20orf166-AS1Q96NR2 134 aa6.27□□□□□ -1.41
LINC01278-204ENST00000609143 A8MUU9 505 aa6.26□□□□□ -1.41
LINC01278-204ENST00000609143 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
LINC01278-204ENST00000609143 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
LINC01278-204ENST00000609143 HRES1P13985 223 aa6.25□□□□□ -1.41
LINC01278-204ENST00000609143 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
LINC01278-204ENST00000609143 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
LINC01278-204ENST00000609143 MT1HL1P0DM35 61 aa6.21□□□□□ -1.42
LINC01278-204ENST00000609143 EPPK1P58107 5090 aaKnown RBP6.2□□□□□ -1.42
LINC01278-204ENST00000609143 TNXBP22105 4242 aa6.2□□□□□ -1.42
LINC01278-204ENST00000609143 ACYP2P14621 99 aa6.19□□□□□ -1.42
LINC01278-204ENST00000609143 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
LINC01278-204ENST00000609143 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
LINC01278-204ENST00000609143 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
LINC01278-204ENST00000609143 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
LINC01278-204ENST00000609143 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms