RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SNCGO76070 127 aa7.63□□□□□ -1.19
CTSA-216ENST00000607212 FAM236DA0A1B0GTK5 79 aa7.62□□□□□ -1.19
CTSA-216ENST00000607212 FAM236CP0DP71 79 aa7.62□□□□□ -1.19
CTSA-216ENST00000607212 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
CTSA-216ENST00000607212 A0A087WSZ3 146 aa7.59□□□□□ -1.19
CTSA-216ENST00000607212 A0A1B0GX51 115 aa7.59□□□□□ -1.19
CTSA-216ENST00000607212 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
CTSA-216ENST00000607212 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.19
CTSA-216ENST00000607212 DSCR10P59022 87 aa7.59□□□□□ -1.19
CTSA-216ENST00000607212 A8MUU9 505 aa7.58□□□□□ -1.2
CTSA-216ENST00000607212 ACYP1P07311 99 aa7.58□□□□□ -1.2
CTSA-216ENST00000607212 DNAL4O96015 105 aa7.57□□□□□ -1.2
CTSA-216ENST00000607212 NDUFV3P56181 108 aaKnown RBP7.56□□□□□ -1.2
CTSA-216ENST00000607212 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
CTSA-216ENST00000607212 ORMDL1Q9P0S3 153 aa7.54□□□□□ -1.2
CTSA-216ENST00000607212 USH2AO75445 5202 aa7.53□□□□□ -1.2
CTSA-216ENST00000607212 RBM12B-AS1Q9P1G2 102 aa7.51□□□□□ -1.21
CTSA-216ENST00000607212 GHRHP01286 108 aa7.5□□□□□ -1.21
CTSA-216ENST00000607212 LINC00313P59037 77 aa7.5□□□□□ -1.21
CTSA-216ENST00000607212 LINC00643Q86TS7 51 aa7.5□□□□□ -1.21
CTSA-216ENST00000607212 C14orf132Q9NPU4 83 aa7.5□□□□□ -1.21
CTSA-216ENST00000607212 SSPOA2VEC9 5147 aa7.5□□□□□ -1.21
CTSA-216ENST00000607212 A0A1B0GV72 72 aa7.49□□□□□ -1.21
CTSA-216ENST00000607212 IGKV4-1P06312 121 aa7.49□□□□□ -1.21
CTSA-216ENST00000607212 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
CTSA-216ENST00000607212 MT2AP02795 61 aa7.46□□□□□ -1.22
CTSA-216ENST00000607212 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
CTSA-216ENST00000607212 CCKP06307 115 aa7.45□□□□□ -1.22
CTSA-216ENST00000607212 IMUPQ9GZP8 106 aa7.45□□□□□ -1.22
CTSA-216ENST00000607212 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
CTSA-216ENST00000607212 ANAPC13Q9BS18 74 aa7.44□□□□□ -1.22
CTSA-216ENST00000607212 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
CTSA-216ENST00000607212 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
CTSA-216ENST00000607212 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
CTSA-216ENST00000607212 H3BQ85 93 aa7.42□□□□□ -1.22
CTSA-216ENST00000607212 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
CTSA-216ENST00000607212 IGHV6-1A0A0B4J1U7 121 aa7.41□□□□□ -1.22
CTSA-216ENST00000607212 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
CTSA-216ENST00000607212 MT1FP04733 61 aa7.4□□□□□ -1.22
CTSA-216ENST00000607212 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
CTSA-216ENST00000607212 HRES1P13985 223 aa7.39□□□□□ -1.23
CTSA-216ENST00000607212 TRBV7-4A0A0J9YYF1 115 aa7.38□□□□□ -1.23
CTSA-216ENST00000607212 Q6ZQT0 140 aa7.38□□□□□ -1.23
CTSA-216ENST00000607212 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
CTSA-216ENST00000607212 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
CTSA-216ENST00000607212 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
CTSA-216ENST00000607212 IGKV3D-7A0A0C4DH55 119 aa7.36□□□□□ -1.23
CTSA-216ENST00000607212 LCE2BO14633 110 aa7.36□□□□□ -1.23
CTSA-216ENST00000607212 FAM236AA0A1B0GUQ0 79 aa7.35□□□□□ -1.23
CTSA-216ENST00000607212 FAM236BA0A1B0GV22 79 aa7.35□□□□□ -1.23
CTSA-216ENST00000607212 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
CTSA-216ENST00000607212 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
CTSA-216ENST00000607212 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
CTSA-216ENST00000607212 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
CTSA-216ENST00000607212 PDE6GP18545 87 aa7.32□□□□□ -1.24
CTSA-216ENST00000607212 C8orf87E5RJ46 101 aa7.31□□□□□ -1.24
CTSA-216ENST00000607212 DSCR8Q96T75 97 aa7.31□□□□□ -1.24
CTSA-216ENST00000607212 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
CTSA-216ENST00000607212 ATP5EP2Q5VTU8 51 aa7.3□□□□□ -1.24
CTSA-216ENST00000607212 A0A1B0GVX0 72 aa7.29□□□□□ -1.24
CTSA-216ENST00000607212 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
CTSA-216ENST00000607212 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
CTSA-216ENST00000607212 A0A087WVE0 104 aa7.26□□□□□ -1.25
CTSA-216ENST00000607212 ATOX1O00244 68 aa7.25□□□□□ -1.25
CTSA-216ENST00000607212 SPINK7P58062 85 aa7.25□□□□□ -1.25
CTSA-216ENST00000607212 Q6ZVQ6 151 aa7.25□□□□□ -1.25
CTSA-216ENST00000607212 UQCRQO14949 82 aa7.21□□□□□ -1.26
CTSA-216ENST00000607212 NDUFB1O75438 58 aa7.21□□□□□ -1.26
CTSA-216ENST00000607212 COX7CP15954 63 aa7.21□□□□□ -1.26
CTSA-216ENST00000607212 A8MWP4 228 aa7.2□□□□□ -1.26
CTSA-216ENST00000607212 J3KT08 172 aa7.2□□□□□ -1.26
CTSA-216ENST00000607212 CXCL6P80162 114 aa7.2□□□□□ -1.26
CTSA-216ENST00000607212 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
CTSA-216ENST00000607212 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
CTSA-216ENST00000607212 SERP2Q8N6R1 65 aa7.18□□□□□ -1.26
CTSA-216ENST00000607212 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
CTSA-216ENST00000607212 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.26
CTSA-216ENST00000607212 Q8N9P0 234 aaPredicted RBP7.15□□□□□ -1.26
CTSA-216ENST00000607212 A0A1B0GW54 56 aa7.13□□□□□ -1.27
CTSA-216ENST00000607212 C8orf17Q9NRJ1 99 aa7.12□□□□□ -1.27
CTSA-216ENST00000607212 NREPQ16612 68 aa7.11□□□□□ -1.27
CTSA-216ENST00000607212 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
CTSA-216ENST00000607212 CYSTM1Q9H1C7 97 aa7.08□□□□□ -1.28
CTSA-216ENST00000607212 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
CTSA-216ENST00000607212 BPY2O14599 106 aa7.06□□□□□ -1.28
CTSA-216ENST00000607212 Q8N9L7 120 aa7.05□□□□□ -1.28
CTSA-216ENST00000607212 NDUFS5O43920 106 aa7.04□□□□□ -1.28
CTSA-216ENST00000607212 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CTSA-216ENST00000607212 C20orf197Q8N268 126 aa7□□□□□ -1.29
CTSA-216ENST00000607212 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
CTSA-216ENST00000607212 TMEM258P61165 79 aa6.99□□□□□ -1.29
CTSA-216ENST00000607212 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
CTSA-216ENST00000607212 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
CTSA-216ENST00000607212 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
CTSA-216ENST00000607212 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
CTSA-216ENST00000607212 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
CTSA-216ENST00000607212 OCR1Q9BZK8 76 aa6.97□□□□□ -1.29
CTSA-216ENST00000607212 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
CTSA-216ENST00000607212 KLKP1Q107X0 134 aa6.95□□□□□ -1.3
CTSA-216ENST00000607212 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms