RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 RBM3P98179 157 aaKnown RBP12.27□□□□□ -0.45
SNX5-219ENST00000606602 KRTAP16-1A8MUX0 517 aa12.26□□□□□ -0.45
SNX5-219ENST00000606602 IGKV4-1P06312 121 aa12.26□□□□□ -0.45
SNX5-219ENST00000606602 FAM236DA0A1B0GTK5 79 aa12.25□□□□□ -0.45
SNX5-219ENST00000606602 FAM236CP0DP71 79 aa12.25□□□□□ -0.45
SNX5-219ENST00000606602 CCKP06307 115 aa12.22□□□□□ -0.45
SNX5-219ENST00000606602 DSCR8Q96T75 97 aa12.22□□□□□ -0.45
SNX5-219ENST00000606602 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.21□□□□□ -0.45
SNX5-219ENST00000606602 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.45
SNX5-219ENST00000606602 JMJD7-PLA2G4BH0Y9G9 81 aa12.2□□□□□ -0.46
SNX5-219ENST00000606602 MT2AP02795 61 aa12.18□□□□□ -0.46
SNX5-219ENST00000606602 NOTCH2NLQ7Z3S9 236 aa12.18□□□□□ -0.46
SNX5-219ENST00000606602 H3BT86 120 aa12.17□□□□□ -0.46
SNX5-219ENST00000606602 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
SNX5-219ENST00000606602 RBM12B-AS1Q9P1G2 102 aa12.17□□□□□ -0.46
SNX5-219ENST00000606602 KRTAP9-7A8MTY7 169 aa12.16□□□□□ -0.46
SNX5-219ENST00000606602 MTURNQ8N3F0 131 aa12.16□□□□□ -0.46
SNX5-219ENST00000606602 HRES1P13985 223 aa12.14□□□□□ -0.47
SNX5-219ENST00000606602 VPS25Q9BRG1 176 aa12.14□□□□□ -0.47
SNX5-219ENST00000606602 LOC110117498A0A087WWA1 95 aa12.13□□□□□ -0.47
SNX5-219ENST00000606602 MPLKIPQ8TAP9 179 aa12.13□□□□□ -0.47
SNX5-219ENST00000606602 LINC00472Q9H8W2 130 aa12.13□□□□□ -0.47
SNX5-219ENST00000606602 IGHV6-1A0A0B4J1U7 121 aa12.12□□□□□ -0.47
SNX5-219ENST00000606602 Q6ZQT0 140 aa12.12□□□□□ -0.47
SNX5-219ENST00000606602 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
SNX5-219ENST00000606602 K7EP34 96 aa12.1□□□□□ -0.47
SNX5-219ENST00000606602 PDE6GP18545 87 aa12.09□□□□□ -0.47
SNX5-219ENST00000606602 MT1FP04733 61 aa12.08□□□□□ -0.48
SNX5-219ENST00000606602 FCGBPQ9Y6R7 5405 aaPredicted RBP12.07□□□□□ -0.48
SNX5-219ENST00000606602 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
SNX5-219ENST00000606602 KRTAP10-10P60014 251 aa12.04□□□□□ -0.48
SNX5-219ENST00000606602 C21orf62-AS1Q17RA5 79 aa12.04□□□□□ -0.48
SNX5-219ENST00000606602 PRO0461Q9UI25 63 aa12.04□□□□□ -0.48
SNX5-219ENST00000606602 LCE2BO14633 110 aa12.02□□□□□ -0.49
SNX5-219ENST00000606602 A0A1B0GW54 56 aa12.01□□□□□ -0.49
SNX5-219ENST00000606602 A0A1B0GVX0 72 aa11.99□□□□□ -0.49
SNX5-219ENST00000606602 C8orf87E5RJ46 101 aa11.99□□□□□ -0.49
SNX5-219ENST00000606602 KRTAP9-3Q9BYQ3 159 aa11.99□□□□□ -0.49
SNX5-219ENST00000606602 GTF2H5Q6ZYL4 71 aa11.98□□□□□ -0.49
SNX5-219ENST00000606602 KRTAP19-1Q8IUB9 90 aa11.97□□□□□ -0.49
SNX5-219ENST00000606602 ZCCHC13Q8WW36 166 aaKnown RBP11.92□□□□□ -0.5
SNX5-219ENST00000606602 SPINK7P58062 85 aa11.89□□□□□ -0.51
SNX5-219ENST00000606602 J3KT08 172 aa11.88□□□□□ -0.51
SNX5-219ENST00000606602 F8W1H4 67 aa11.87□□□□□ -0.51
SNX5-219ENST00000606602 NREPQ16612 68 aa11.83□□□□□ -0.52
SNX5-219ENST00000606602 MACF1Q9UPN3 7388 aaKnown RBP11.82□□□□□ -0.52
SNX5-219ENST00000606602 NDUFB1O75438 58 aa11.79□□□□□ -0.52
SNX5-219ENST00000606602 Q8N9P0 234 aaPredicted RBP11.79□□□□□ -0.52
SNX5-219ENST00000606602 A8MWP4 228 aa11.77□□□□□ -0.53
SNX5-219ENST00000606602 ETDBQ3ZM63 59 aa11.77□□□□□ -0.53
SNX5-219ENST00000606602 SYNE2Q8WXH0 6885 aaKnown RBP11.75□□□□□ -0.53
SNX5-219ENST00000606602 IGKV3D-7A0A0C4DH55 119 aa11.74□□□□□ -0.53
SNX5-219ENST00000606602 WFDC13Q8IUB5 93 aa11.74□□□□□ -0.53
SNX5-219ENST00000606602 Q6ZVQ6 151 aa11.72□□□□□ -0.53
SNX5-219ENST00000606602 C8orf17Q9NRJ1 99 aa11.72□□□□□ -0.53
SNX5-219ENST00000606602 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
SNX5-219ENST00000606602 A0A1B0GV90 55 aa11.69□□□□□ -0.54
SNX5-219ENST00000606602 PRR15Q8IV56 129 aa11.68□□□□□ -0.54
SNX5-219ENST00000606602 BPY2O14599 106 aa11.66□□□□□ -0.54
SNX5-219ENST00000606602 KRTAP19-6Q3LI70 58 aa11.65□□□□□ -0.54
SNX5-219ENST00000606602 K7EQZ3 153 aa11.63□□□□□ -0.55
SNX5-219ENST00000606602 UBL5Q9BZL1 73 aa11.62□□□□□ -0.55
SNX5-219ENST00000606602 MMP24-AS1A0A0U1RRL7 71 aa11.58□□□□□ -0.56
SNX5-219ENST00000606602 Q8N9L7 120 aa11.54□□□□□ -0.56
SNX5-219ENST00000606602 TMEM254Q8TBM7 123 aa11.52□□□□□ -0.57
SNX5-219ENST00000606602 MRPL34Q9BQ48 92 aaKnown RBP11.51□□□□□ -0.57
SNX5-219ENST00000606602 H1FX-AS1Q4G0G2 97 aa11.5□□□□□ -0.57
SNX5-219ENST00000606602 hDV103S1A0JD37 113 aa11.49□□□□□ -0.57
SNX5-219ENST00000606602 ACYP1P07311 99 aa11.47□□□□□ -0.57
SNX5-219ENST00000606602 FAM240AA0A1B0GVK7 77 aa11.46□□□□□ -0.57
SNX5-219ENST00000606602 NDUFS5O43920 106 aa11.45□□□□□ -0.58
SNX5-219ENST00000606602 CXCL6P80162 114 aa11.43□□□□□ -0.58
SNX5-219ENST00000606602 CASC2Q6XLA1 102 aa11.41□□□□□ -0.58
SNX5-219ENST00000606602 IGKV2D-30A0A075B6S6 120 aa11.38□□□□□ -0.59
SNX5-219ENST00000606602 IGKV2-30P06310 120 aa11.38□□□□□ -0.59
SNX5-219ENST00000606602 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
SNX5-219ENST00000606602 C7orf65Q6ZTY9 151 aa11.32□□□□□ -0.6
SNX5-219ENST00000606602 KRTAP6-3Q3LI67 103 aa11.31□□□□□ -0.6
SNX5-219ENST00000606602 Q5W150 140 aa11.3□□□□□ -0.6
SNX5-219ENST00000606602 ATP5EP2Q5VTU8 51 aa11.28□□□□□ -0.6
SNX5-219ENST00000606602 LINC00643Q86TS7 51 aa11.22□□□□□ -0.61
SNX5-219ENST00000606602 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
SNX5-219ENST00000606602 J3QR89 54 aa11.2□□□□□ -0.62
SNX5-219ENST00000606602 HIST1H4AP62805 103 aaKnown RBP11.14□□□□□ -0.63
SNX5-219ENST00000606602 C5orf47Q569G3 176 aa11.13□□□□□ -0.63
SNX5-219ENST00000606602 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
SNX5-219ENST00000606602 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
SNX5-219ENST00000606602 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
SNX5-219ENST00000606602 NEBP20929 6669 aa11.07□□□□□ -0.64
SNX5-219ENST00000606602 A0A087WVE0 104 aa11.06□□□□□ -0.64
SNX5-219ENST00000606602 A6NN06 94 aa11.03□□□□□ -0.64
SNX5-219ENST00000606602 KRTAP3-1Q9BYR8 98 aa11.01□□□□□ -0.65
SNX5-219ENST00000606602 S4R3F8 94 aa11.01□□□□□ -0.65
SNX5-219ENST00000606602 MT1BP07438 61 aa10.99□□□□□ -0.65
SNX5-219ENST00000606602 K7ERU9 68 aa10.98□□□□□ -0.65
SNX5-219ENST00000606602 Q5VV11 94 aa10.98□□□□□ -0.65
SNX5-219ENST00000606602 CSAG1Q6PB30 78 aa10.98□□□□□ -0.65
SNX5-219ENST00000606602 C1orf64Q8NEQ6 169 aa10.95□□□□□ -0.66
SNX5-219ENST00000606602 LCA10Q71F78 164 aa10.93□□□□□ -0.66
SNX5-219ENST00000606602 SPRR2GQ9BYE4 73 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms