RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 MACF1Q9UPN3 7388 aaKnown RBP0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 SPENQ96T58 3664 aaKnown RBP0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 KMT2DO14686 5537 aa0.21□□□□□ -2.38
UBE2E3-212ENST00000602888 KMT2AQ03164 3969 aa0.21□□□□□ -2.38
UBE2E3-212ENST00000602888 SPTA1P02549 2419 aa0.21□□□□□ -2.38
UBE2E3-212ENST00000602888 CUBNO60494 3623 aa0.2□□□□□ -2.38
UBE2E3-212ENST00000602888 VPS13BQ7Z7G8 4022 aa0.2□□□□□ -2.38
UBE2E3-212ENST00000602888 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
UBE2E3-212ENST00000602888 CEP290O15078 2479 aa0.2□□□□□ -2.38
UBE2E3-212ENST00000602888 HUWE1Q7Z6Z7 4374 aaKnown RBP0.2□□□□□ -2.38
UBE2E3-212ENST00000602888 UNC79Q9P2D8 2635 aa0.19□□□□□ -2.38
UBE2E3-212ENST00000602888 ZFYVE26Q68DK2 2539 aa0.19□□□□□ -2.38
UBE2E3-212ENST00000602888 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
UBE2E3-212ENST00000602888 ACANP16112 2415 aa0.19□□□□□ -2.38
UBE2E3-212ENST00000602888 STAB1Q9NY15 2570 aa0.18□□□□□ -2.38
UBE2E3-212ENST00000602888 H3BNG1 76 aa0.18□□□□□ -2.38
UBE2E3-212ENST00000602888 SPRR2BP35325 72 aa0.18□□□□□ -2.38
UBE2E3-212ENST00000602888 SACSQ9NZJ4 4579 aa0.18□□□□□ -2.38
UBE2E3-212ENST00000602888 SVEP1Q4LDE5 3571 aa0.17□□□□□ -2.38
UBE2E3-212ENST00000602888 HECTD1Q9ULT8 2610 aa0.17□□□□□ -2.38
UBE2E3-212ENST00000602888 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
UBE2E3-212ENST00000602888 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
UBE2E3-212ENST00000602888 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
UBE2E3-212ENST00000602888 HSPG2P98160 4391 aa0.17□□□□□ -2.38
UBE2E3-212ENST00000602888 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
UBE2E3-212ENST00000602888 WNK1Q9H4A3 2382 aa0.16□□□□□ -2.38
UBE2E3-212ENST00000602888 DNAH11Q96DT5 4516 aa0.16□□□□□ -2.38
UBE2E3-212ENST00000602888 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
UBE2E3-212ENST00000602888 LPAP08519 4548 aa0.15□□□□□ -2.38
UBE2E3-212ENST00000602888 ZZEF1O43149 2961 aa0.15□□□□□ -2.38
UBE2E3-212ENST00000602888 APC2O95996 2303 aa0.15□□□□□ -2.38
UBE2E3-212ENST00000602888 CHD8Q9HCK8 2581 aa0.15□□□□□ -2.38
UBE2E3-212ENST00000602888 M0QY20 66 aa0.15□□□□□ -2.39
UBE2E3-212ENST00000602888 DEFB131AP59861 70 aa0.15□□□□□ -2.39
UBE2E3-212ENST00000602888 SPTBN4Q9H254 2564 aa0.15□□□□□ -2.39
UBE2E3-212ENST00000602888 PKD1L2Q7Z442 2459 aa0.14□□□□□ -2.39
UBE2E3-212ENST00000602888 CACNA1AO00555 2505 aa0.14□□□□□ -2.39
UBE2E3-212ENST00000602888 HECTD4Q9Y4D8 3996 aa0.14□□□□□ -2.39
UBE2E3-212ENST00000602888 COL6A5A8TX70 2615 aa0.14□□□□□ -2.39
UBE2E3-212ENST00000602888 DMXL1Q9Y485 3027 aa0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 GCN1Q92616 2671 aaKnown RBP0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 PKHD1L1Q86WI1 4243 aa0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 CREBBPQ92793 2442 aa0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 RANBP2P49792 3224 aaKnown RBP0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 C9orf92A6NGG3 77 aa0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 POLR2KP53803 58 aaKnown RBP0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 CLPSL2Q6UWE3 100 aa0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 SRRM2Q9UQ35 2752 aaKnown RBP0.13□□□□□ -2.39
UBE2E3-212ENST00000602888 SETXQ7Z333 2677 aaKnown RBP0.12□□□□□ -2.39
UBE2E3-212ENST00000602888 VPS13DQ5THJ4 4388 aa0.12□□□□□ -2.39
UBE2E3-212ENST00000602888 FLNCQ14315 2725 aa0.12□□□□□ -2.39
UBE2E3-212ENST00000602888 DEFB110Q30KQ9 67 aa0.12□□□□□ -2.39
UBE2E3-212ENST00000602888 FLNBO75369 2602 aaKnown RBP0.12□□□□□ -2.39
UBE2E3-212ENST00000602888 ANK3Q12955 4377 aaKnown RBP0.12□□□□□ -2.39
UBE2E3-212ENST00000602888 TACC2O95359 2948 aa0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 SONP18583 2426 aaKnown RBP0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 SPRR2AP35326 72 aa0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 SNRPGP62308 76 aaKnown RBP0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 RPL39P62891 51 aaKnown RBP0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 ACACAQ13085 2346 aa0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 PKD1P98161 4303 aa0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 COL6A3P12111 3177 aa0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 MAP1BP46821 2468 aaKnown RBP0.11□□□□□ -2.39
UBE2E3-212ENST00000602888 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 NF1P21359 2839 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 NBPF19A0A087WUL8 3843 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 LAMA5O15230 3695 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 FAT3Q8TDW7 4589 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 A8MTW9 85 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 ZANQ9Y493 2812 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 CHD7Q9P2D1 2997 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 CELSR3Q9NYQ7 3312 aa0.1□□□□□ -2.39
UBE2E3-212ENST00000602888 APOBP04114 4563 aaKnown RBP0.09□□□□□ -2.39
UBE2E3-212ENST00000602888 DNAH3Q8TD57 4116 aa0.09□□□□□ -2.39
UBE2E3-212ENST00000602888 TNP1P09430 55 aa0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 SPRR2EP22531 72 aa0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 RPL39LQ96EH5 51 aaKnown RBP0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 ZFHX4Q86UP3 3567 aa0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 SETD2Q9BYW2 2564 aaPredicted RBP0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 RELNP78509 3460 aa0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 TRIOO75962 3097 aa0.09□□□□□ -2.4
UBE2E3-212ENST00000602888 FLGP20930 4061 aaPredicted RBP0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 M0QZ58 72 aa0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 MT1AP04731 61 aa0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 SPRR2FQ96RM1 72 aa0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 SPTBN5Q9NRC6 3674 aaKnown RBP0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 DNAH2Q9P225 4427 aa0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 FAT1Q14517 4588 aa0.08□□□□□ -2.4
UBE2E3-212ENST00000602888 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 KRTAP19-5Q3LI72 72 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 LEAP2Q969E1 77 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 KALRNO60229 2985 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 DNAH6Q9C0G6 4158 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 ACACBO00763 2458 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 CCDC168Q8NDH2 2452 aa0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 ANKRD11Q6UB99 2663 aaPredicted RBP0.07□□□□□ -2.4
UBE2E3-212ENST00000602888 KRTAP8-1Q8IUC2 63 aa0.06□□□□□ -2.4
UBE2E3-212ENST00000602888 DNAH8Q96JB1 4490 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms