RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 A0A1B0GV72 72 aa7.32□□□□□ -1.24
SSBP4-211ENST00000601614 H0YGX0 51 aa7.31□□□□□ -1.24
SSBP4-211ENST00000601614 ANKRD29Q8N6D5 301 aa7.31□□□□□ -1.24
SSBP4-211ENST00000601614 SNCGO76070 127 aa7.3□□□□□ -1.24
SSBP4-211ENST00000601614 GHRHP01286 108 aa7.3□□□□□ -1.24
SSBP4-211ENST00000601614 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
SSBP4-211ENST00000601614 HIGD1BQ9P298 99 aa7.29□□□□□ -1.24
SSBP4-211ENST00000601614 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
SSBP4-211ENST00000601614 H1FX-AS1Q4G0G2 97 aa7.27□□□□□ -1.25
SSBP4-211ENST00000601614 A0A0B4J2C4 111 aa7.26□□□□□ -1.25
SSBP4-211ENST00000601614 TRACP01848 142 aa7.25□□□□□ -1.25
SSBP4-211ENST00000601614 CCKP06307 115 aa7.25□□□□□ -1.25
SSBP4-211ENST00000601614 A0A1B0GX51 115 aa7.24□□□□□ -1.25
SSBP4-211ENST00000601614 PYY3Q5JQD4 70 aa7.24□□□□□ -1.25
SSBP4-211ENST00000601614 FXYD2P54710 66 aa7.23□□□□□ -1.25
SSBP4-211ENST00000601614 CEND1Q8N111 149 aa7.23□□□□□ -1.25
SSBP4-211ENST00000601614 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
SSBP4-211ENST00000601614 Q5VV11 94 aa7.22□□□□□ -1.25
SSBP4-211ENST00000601614 TMA7Q9Y2S6 64 aaKnown RBP7.19□□□□□ -1.26
SSBP4-211ENST00000601614 TRIAP1O43715 76 aa7.17□□□□□ -1.26
SSBP4-211ENST00000601614 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
SSBP4-211ENST00000601614 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
SSBP4-211ENST00000601614 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
SSBP4-211ENST00000601614 A6NJY4 79 aa7.16□□□□□ -1.26
SSBP4-211ENST00000601614 K7ERJ3 54 aa7.16□□□□□ -1.26
SSBP4-211ENST00000601614 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.26
SSBP4-211ENST00000601614 HSD52Q0P140 79 aa7.15□□□□□ -1.26
SSBP4-211ENST00000601614 ORMDL1Q9P0S3 153 aa7.15□□□□□ -1.26
SSBP4-211ENST00000601614 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
SSBP4-211ENST00000601614 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
SSBP4-211ENST00000601614 C8orf17Q9NRJ1 99 aa7.14□□□□□ -1.27
SSBP4-211ENST00000601614 J3KT08 172 aa7.11□□□□□ -1.27
SSBP4-211ENST00000601614 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
SSBP4-211ENST00000601614 FAM236BA0A1B0GV22 79 aa7.1□□□□□ -1.27
SSBP4-211ENST00000601614 SPRR2EP22531 72 aa7.1□□□□□ -1.27
SSBP4-211ENST00000601614 SPRR2BP35325 72 aa7.1□□□□□ -1.27
SSBP4-211ENST00000601614 SPRR2AP35326 72 aa7.1□□□□□ -1.27
SSBP4-211ENST00000601614 TMEM256-PLSCR3K7ERE1 68 aa7.09□□□□□ -1.27
SSBP4-211ENST00000601614 DNAL4O96015 105 aa7.09□□□□□ -1.27
SSBP4-211ENST00000601614 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
SSBP4-211ENST00000601614 UQCR10Q9UDW1 63 aa7.08□□□□□ -1.28
SSBP4-211ENST00000601614 NDUFB1O75438 58 aa7.07□□□□□ -1.28
SSBP4-211ENST00000601614 H3BQ85 93 aa7.06□□□□□ -1.28
SSBP4-211ENST00000601614 PSMB2P49721 201 aa7.06□□□□□ -1.28
SSBP4-211ENST00000601614 Q6ZVQ6 151 aa7.06□□□□□ -1.28
SSBP4-211ENST00000601614 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
SSBP4-211ENST00000601614 KRTAP2-2Q9BYT5 123 aa7.06□□□□□ -1.28
SSBP4-211ENST00000601614 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
SSBP4-211ENST00000601614 UBE2V1Q13404 147 aa7.05□□□□□ -1.28
SSBP4-211ENST00000601614 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
SSBP4-211ENST00000601614 Q6ZQT0 140 aa7.04□□□□□ -1.28
SSBP4-211ENST00000601614 RBM3P98179 157 aaKnown RBP7.01□□□□□ -1.29
SSBP4-211ENST00000601614 IGKV2D-30A0A075B6S6 120 aa7□□□□□ -1.29
SSBP4-211ENST00000601614 LOC105371267A0A1B0GV96 52 aa7□□□□□ -1.29
SSBP4-211ENST00000601614 IGKV2-30P06310 120 aa7□□□□□ -1.29
SSBP4-211ENST00000601614 COX6CP09669 75 aa6.99□□□□□ -1.29
SSBP4-211ENST00000601614 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
SSBP4-211ENST00000601614 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.3
SSBP4-211ENST00000601614 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
SSBP4-211ENST00000601614 LCE1AQ5T7P2 110 aa6.95□□□□□ -1.3
SSBP4-211ENST00000601614 Q5W150 140 aa6.95□□□□□ -1.3
SSBP4-211ENST00000601614 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
SSBP4-211ENST00000601614 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
SSBP4-211ENST00000601614 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
SSBP4-211ENST00000601614 C7orf65Q6ZTY9 151 aa6.94□□□□□ -1.3
SSBP4-211ENST00000601614 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
SSBP4-211ENST00000601614 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
SSBP4-211ENST00000601614 C9JAW5 83 aa6.93□□□□□ -1.3
SSBP4-211ENST00000601614 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
SSBP4-211ENST00000601614 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
SSBP4-211ENST00000601614 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
SSBP4-211ENST00000601614 NDUFS5O43920 106 aa6.9□□□□□ -1.3
SSBP4-211ENST00000601614 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
SSBP4-211ENST00000601614 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
SSBP4-211ENST00000601614 M0R143 59 aa6.88□□□□□ -1.31
SSBP4-211ENST00000601614 BAALC-AS2P0C853 105 aa6.87□□□□□ -1.31
SSBP4-211ENST00000601614 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
SSBP4-211ENST00000601614 CSAG1Q6PB30 78 aa6.86□□□□□ -1.31
SSBP4-211ENST00000601614 LCA10Q71F78 164 aa6.86□□□□□ -1.31
SSBP4-211ENST00000601614 S4R3F8 94 aa6.86□□□□□ -1.31
SSBP4-211ENST00000601614 SPRR2DP22532 72 aa6.85□□□□□ -1.31
SSBP4-211ENST00000601614 ATXN8Q156A1 80 aa6.83□□□□□ -1.32
SSBP4-211ENST00000601614 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
SSBP4-211ENST00000601614 K7EQZ3 153 aa6.81□□□□□ -1.32
SSBP4-211ENST00000601614 A0A1B0GW54 56 aa6.79□□□□□ -1.32
SSBP4-211ENST00000601614 BATFQ16520 125 aa6.79□□□□□ -1.32
SSBP4-211ENST00000601614 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
SSBP4-211ENST00000601614 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
SSBP4-211ENST00000601614 C14orf132Q9NPU4 83 aa6.77□□□□□ -1.33
SSBP4-211ENST00000601614 JMJD7-PLA2G4BH0Y9G9 81 aa6.76□□□□□ -1.33
SSBP4-211ENST00000601614 NREPQ16612 68 aa6.75□□□□□ -1.33
SSBP4-211ENST00000601614 MT1XP80297 61 aa6.74□□□□□ -1.33
SSBP4-211ENST00000601614 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
SSBP4-211ENST00000601614 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
SSBP4-211ENST00000601614 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
SSBP4-211ENST00000601614 TAX1BP3O14907 124 aa6.71□□□□□ -1.34
SSBP4-211ENST00000601614 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
SSBP4-211ENST00000601614 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
SSBP4-211ENST00000601614 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
SSBP4-211ENST00000601614 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms