RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DNAH6Q9C0G6 4158 aa11.96□□□□□ -0.5
SHKBP1-225ENST00000600733 IGLV7-43P04211 117 aa11.95□□□□□ -0.5
SHKBP1-225ENST00000600733 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
SHKBP1-225ENST00000600733 V9GYY9 64 aa11.93□□□□□ -0.5
SHKBP1-225ENST00000600733 COA5Q86WW8 74 aa11.93□□□□□ -0.5
SHKBP1-225ENST00000600733 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-225ENST00000600733 CIRBP-AS1Q8TBR5 109 aa11.92□□□□□ -0.5
SHKBP1-225ENST00000600733 ALMS1Q8TCU4 4167 aa11.91□□□□□ -0.5
SHKBP1-225ENST00000600733 LY6G6CO95867 125 aa11.89□□□□□ -0.51
SHKBP1-225ENST00000600733 Q5VV11 94 aa11.88□□□□□ -0.51
SHKBP1-225ENST00000600733 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
SHKBP1-225ENST00000600733 KRTAP10-2P60368 255 aa11.83□□□□□ -0.52
SHKBP1-225ENST00000600733 LIMD2Q9BT23 127 aa11.83□□□□□ -0.52
SHKBP1-225ENST00000600733 DNHD1Q96M86 4753 aa11.83□□□□□ -0.52
SHKBP1-225ENST00000600733 C1orf195Q5TG92 126 aa11.83□□□□□ -0.52
SHKBP1-225ENST00000600733 DNAH5Q8TE73 4624 aa11.82□□□□□ -0.52
SHKBP1-225ENST00000600733 PRR15LQ9BU68 103 aa11.82□□□□□ -0.52
SHKBP1-225ENST00000600733 Q5W150 140 aa11.81□□□□□ -0.52
SHKBP1-225ENST00000600733 A8MU10 97 aa11.79□□□□□ -0.52
SHKBP1-225ENST00000600733 CHKB-CPT1BH3BT56 60 aa11.77□□□□□ -0.53
SHKBP1-225ENST00000600733 SSBP3-AS1Q7Z2R9 100 aa11.77□□□□□ -0.53
SHKBP1-225ENST00000600733 KRTAP13-3Q3SY46 172 aa11.75□□□□□ -0.53
SHKBP1-225ENST00000600733 HRES1P13985 223 aa11.75□□□□□ -0.53
SHKBP1-225ENST00000600733 LOC101927531A0A1B0GV80 90 aa11.73□□□□□ -0.53
SHKBP1-225ENST00000600733 SPAG11AQ6PDA7 123 aa11.72□□□□□ -0.53
SHKBP1-225ENST00000600733 KRTAP13-2Q52LG2 175 aa11.7□□□□□ -0.54
SHKBP1-225ENST00000600733 LRP1BQ9NZR2 4599 aa11.69□□□□□ -0.54
SHKBP1-225ENST00000600733 PKD1P98161 4303 aa11.67□□□□□ -0.54
SHKBP1-225ENST00000600733 C8orf87E5RJ46 101 aa11.67□□□□□ -0.54
SHKBP1-225ENST00000600733 Q75L30 129 aa11.67□□□□□ -0.54
SHKBP1-225ENST00000600733 KRTAP10-1P60331 282 aa11.67□□□□□ -0.54
SHKBP1-225ENST00000600733 LINC00313P59037 77 aa11.65□□□□□ -0.55
SHKBP1-225ENST00000600733 Q6ZSA8 131 aa11.63□□□□□ -0.55
SHKBP1-225ENST00000600733 LINC01558Q9Y6Z2 57 aa11.62□□□□□ -0.55
SHKBP1-225ENST00000600733 RETNLBQ9BQ08 111 aa11.62□□□□□ -0.55
SHKBP1-225ENST00000600733 A6NED7 52 aa11.61□□□□□ -0.55
SHKBP1-225ENST00000600733 HYDINQ4G0P3 5121 aa11.61□□□□□ -0.55
SHKBP1-225ENST00000600733 FAT2Q9NYQ8 4349 aa11.6□□□□□ -0.55
SHKBP1-225ENST00000600733 LCA10Q71F78 164 aa11.59□□□□□ -0.55
SHKBP1-225ENST00000600733 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
SHKBP1-225ENST00000600733 VPS13BQ7Z7G8 4022 aa11.57□□□□□ -0.56
SHKBP1-225ENST00000600733 KRTAP1-4P0C5Y4 121 aa11.56□□□□□ -0.56
SHKBP1-225ENST00000600733 FAM229AH3BQW9 127 aa11.55□□□□□ -0.56
SHKBP1-225ENST00000600733 PMAIP1Q13794 54 aa11.52□□□□□ -0.57
SHKBP1-225ENST00000600733 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
SHKBP1-225ENST00000600733 ACYP2P14621 99 aa11.51□□□□□ -0.57
SHKBP1-225ENST00000600733 SPTSSBQ8NFR3 76 aa11.51□□□□□ -0.57
SHKBP1-225ENST00000600733 DMAC1Q96GE9 116 aa11.48□□□□□ -0.57
SHKBP1-225ENST00000600733 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
SHKBP1-225ENST00000600733 SPINK7P58062 85 aa11.47□□□□□ -0.57
SHKBP1-225ENST00000600733 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.58
SHKBP1-225ENST00000600733 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-225ENST00000600733 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
SHKBP1-225ENST00000600733 TYMSOSQ8TAI1 123 aa11.39□□□□□ -0.59
SHKBP1-225ENST00000600733 PKHD1P08F94 4074 aa11.39□□□□□ -0.59
SHKBP1-225ENST00000600733 C4orf48Q5BLP8 95 aa11.39□□□□□ -0.59
SHKBP1-225ENST00000600733 IGKV2D-30A0A075B6S6 120 aa11.37□□□□□ -0.59
SHKBP1-225ENST00000600733 SPINK1P00995 79 aa11.32□□□□□ -0.6
SHKBP1-225ENST00000600733 A6NN06 94 aa11.29□□□□□ -0.6
SHKBP1-225ENST00000600733 KTN1-AS1Q86SY8 53 aa11.24□□□□□ -0.61
SHKBP1-225ENST00000600733 A0A1B0GU69 56 aa11.23□□□□□ -0.61
SHKBP1-225ENST00000600733 C7orf65Q6ZTY9 151 aa11.23□□□□□ -0.61
SHKBP1-225ENST00000600733 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
SHKBP1-225ENST00000600733 SEC61GP60059 68 aa11.2□□□□□ -0.62
SHKBP1-225ENST00000600733 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-225ENST00000600733 SACSQ9NZJ4 4579 aa11.18□□□□□ -0.62
SHKBP1-225ENST00000600733 RPS29P62273 56 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-225ENST00000600733 Q8N1X5 172 aa11.12□□□□□ -0.63
SHKBP1-225ENST00000600733 DYNC1H1Q14204 4646 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-225ENST00000600733 FAT1Q14517 4588 aa11.09□□□□□ -0.63
SHKBP1-225ENST00000600733 C9orf92A6NGG3 77 aa11.07□□□□□ -0.64
SHKBP1-225ENST00000600733 SPATA8Q6RVD6 105 aa11.04□□□□□ -0.64
SHKBP1-225ENST00000600733 UQCR11O14957 56 aa11.01□□□□□ -0.65
SHKBP1-225ENST00000600733 PKHD1L1Q86WI1 4243 aa11□□□□□ -0.65
SHKBP1-225ENST00000600733 MIR22HGQ0VDD5 57 aa11□□□□□ -0.65
SHKBP1-225ENST00000600733 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
SHKBP1-225ENST00000600733 APOBP04114 4563 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-225ENST00000600733 RBM12B-AS1Q9P1G2 102 aa10.98□□□□□ -0.65
SHKBP1-225ENST00000600733 A0A1B0GVY2 172 aa10.97□□□□□ -0.65
SHKBP1-225ENST00000600733 A8MUU9 505 aa10.96□□□□□ -0.65
SHKBP1-225ENST00000600733 C20orf166-AS1Q96NR2 134 aa10.96□□□□□ -0.65
SHKBP1-225ENST00000600733 KRTAP21-3Q3LHN1 58 aa10.92□□□□□ -0.66
SHKBP1-225ENST00000600733 KRTAP3-1Q9BYR8 98 aa10.87□□□□□ -0.67
SHKBP1-225ENST00000600733 PRAC1Q96KF2 57 aa10.83□□□□□ -0.68
SHKBP1-225ENST00000600733 ADM2Q7Z4H4 148 aa10.83□□□□□ -0.68
SHKBP1-225ENST00000600733 FLG2Q5D862 2391 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-225ENST00000600733 RYR2Q92736 4967 aa10.75□□□□□ -0.69
SHKBP1-225ENST00000600733 KMT2CQ8NEZ4 4911 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-225ENST00000600733 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-225ENST00000600733 H0YAA0 97 aa10.69□□□□□ -0.7
SHKBP1-225ENST00000600733 FAT3Q8TDW7 4589 aa10.64□□□□□ -0.71
SHKBP1-225ENST00000600733 TNXBP22105 4242 aa10.64□□□□□ -0.71
SHKBP1-225ENST00000600733 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
SHKBP1-225ENST00000600733 A0A1B0GU33 70 aa10.61□□□□□ -0.71
SHKBP1-225ENST00000600733 H1FX-AS1Q4G0G2 97 aa10.57□□□□□ -0.72
SHKBP1-225ENST00000600733 HSPG2P98160 4391 aa10.56□□□□□ -0.72
SHKBP1-225ENST00000600733 KRTAP10-8P60410 259 aa10.55□□□□□ -0.72
SHKBP1-225ENST00000600733 DMBT1Q9UGM3 2413 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-225ENST00000600733 Q5VSD8 79 aa10.51□□□□□ -0.73
SHKBP1-225ENST00000600733 CSAG1Q6PB30 78 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms