RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 MMP24-AS1A0A0U1RRL7 71 aa11.59□□□□□ -0.55
PNKP-214ENST00000600573 LINC00304Q8N9R0 145 aa11.58□□□□□ -0.56
PNKP-214ENST00000600573 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
PNKP-214ENST00000600573 CYSTM1Q9H1C7 97 aa11.57□□□□□ -0.56
PNKP-214ENST00000600573 KLKP1Q107X0 134 aa11.57□□□□□ -0.56
PNKP-214ENST00000600573 PKHD1L1Q86WI1 4243 aa11.55□□□□□ -0.56
PNKP-214ENST00000600573 Q8N1X5 172 aa11.55□□□□□ -0.56
PNKP-214ENST00000600573 TMEM254Q8TBM7 123 aa11.54□□□□□ -0.56
PNKP-214ENST00000600573 C8orf17Q9NRJ1 99 aa11.54□□□□□ -0.56
PNKP-214ENST00000600573 KIAA1109Q2LD37 5005 aa11.53□□□□□ -0.56
PNKP-214ENST00000600573 IGHV6-1A0A0B4J1U7 121 aa11.52□□□□□ -0.57
PNKP-214ENST00000600573 hDV103S1A0JD37 113 aa11.52□□□□□ -0.57
PNKP-214ENST00000600573 HERC2O95714 4834 aa11.52□□□□□ -0.57
PNKP-214ENST00000600573 TMEM258P61165 79 aa11.51□□□□□ -0.57
PNKP-214ENST00000600573 SNURFQ9Y675 71 aa11.51□□□□□ -0.57
PNKP-214ENST00000600573 A0A0U1RQV1 116 aa11.49□□□□□ -0.57
PNKP-214ENST00000600573 C1orf195Q5TG92 126 aa11.49□□□□□ -0.57
PNKP-214ENST00000600573 KRTAP17-1Q9BYP8 105 aa11.49□□□□□ -0.57
PNKP-214ENST00000600573 NDUFC1O43677 76 aa11.48□□□□□ -0.57
PNKP-214ENST00000600573 C5orf47Q569G3 176 aa11.47□□□□□ -0.57
PNKP-214ENST00000600573 C8orf87E5RJ46 101 aa11.44□□□□□ -0.58
PNKP-214ENST00000600573 H7BZZ5 65 aa11.43□□□□□ -0.58
PNKP-214ENST00000600573 KRTAP10-8P60410 259 aa11.42□□□□□ -0.58
PNKP-214ENST00000600573 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.58
PNKP-214ENST00000600573 MP68P56378 58 aa11.39□□□□□ -0.59
PNKP-214ENST00000600573 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
PNKP-214ENST00000600573 NOTCH2NLQ7Z3S9 236 aa11.37□□□□□ -0.59
PNKP-214ENST00000600573 H0Y9P7 68 aa11.36□□□□□ -0.59
PNKP-214ENST00000600573 H3BPC8 53 aa11.36□□□□□ -0.59
PNKP-214ENST00000600573 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
PNKP-214ENST00000600573 PCLOQ9Y6V0 5065 aa11.36□□□□□ -0.59
PNKP-214ENST00000600573 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
PNKP-214ENST00000600573 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
PNKP-214ENST00000600573 LINC00313P59037 77 aa11.34□□□□□ -0.59
PNKP-214ENST00000600573 TRAV22A0A0B4J277 110 aa11.33□□□□□ -0.6
PNKP-214ENST00000600573 NDUFS5O43920 106 aa11.33□□□□□ -0.6
PNKP-214ENST00000600573 ATP5EP56381 51 aaPredicted RBP11.31□□□□□ -0.6
PNKP-214ENST00000600573 OXTP01178 125 aa11.28□□□□□ -0.6
PNKP-214ENST00000600573 LINC00208Q96KT6 92 aa11.28□□□□□ -0.6
PNKP-214ENST00000600573 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
PNKP-214ENST00000600573 FAT3Q8TDW7 4589 aa11.24□□□□□ -0.61
PNKP-214ENST00000600573 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
PNKP-214ENST00000600573 TNXBP22105 4242 aa11.21□□□□□ -0.61
PNKP-214ENST00000600573 ABCA13Q86UQ4 5058 aa11.2□□□□□ -0.62
PNKP-214ENST00000600573 RPS28P62857 69 aaKnown RBP11.2□□□□□ -0.62
PNKP-214ENST00000600573 KRTAP16-1A8MUX0 517 aa11.19□□□□□ -0.62
PNKP-214ENST00000600573 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
PNKP-214ENST00000600573 LRP1Q07954 4544 aaKnown RBP11.18□□□□□ -0.62
PNKP-214ENST00000600573 MT1HL1P0DM35 61 aa11.17□□□□□ -0.62
PNKP-214ENST00000600573 FP248Q71RG6 208 aaPredicted RBP11.17□□□□□ -0.62
PNKP-214ENST00000600573 SERP1Q9Y6X1 66 aa11.16□□□□□ -0.62
PNKP-214ENST00000600573 KRTAP13-3Q3SY46 172 aa11.12□□□□□ -0.63
PNKP-214ENST00000600573 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
PNKP-214ENST00000600573 LOC101927531A0A1B0GV80 90 aa11.09□□□□□ -0.63
PNKP-214ENST00000600573 Q5W150 140 aa11.09□□□□□ -0.63
PNKP-214ENST00000600573 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
PNKP-214ENST00000600573 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
PNKP-214ENST00000600573 CYP4F30PQ9H0H9 118 aa11.06□□□□□ -0.64
PNKP-214ENST00000600573 MYCBP2O75592 4640 aa11.04□□□□□ -0.64
PNKP-214ENST00000600573 PCOTHQ58A44 107 aa11.02□□□□□ -0.65
PNKP-214ENST00000600573 C20orf166-AS1Q96NR2 134 aa10.99□□□□□ -0.65
PNKP-214ENST00000600573 PRR4Q16378 134 aa10.98□□□□□ -0.65
PNKP-214ENST00000600573 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
PNKP-214ENST00000600573 C9orf92A6NGG3 77 aa10.98□□□□□ -0.65
PNKP-214ENST00000600573 A8MUU9 505 aa10.98□□□□□ -0.65
PNKP-214ENST00000600573 DMBT1Q9UGM3 2413 aaPredicted RBP10.94□□□□□ -0.66
PNKP-214ENST00000600573 IGKV2-30P06310 120 aa10.94□□□□□ -0.66
PNKP-214ENST00000600573 Q75L30 129 aa10.91□□□□□ -0.66
PNKP-214ENST00000600573 J3QL48 77 aa10.9□□□□□ -0.66
PNKP-214ENST00000600573 SMIM26A0A096LP01 95 aa10.88□□□□□ -0.67
PNKP-214ENST00000600573 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
PNKP-214ENST00000600573 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
PNKP-214ENST00000600573 HRES1P13985 223 aa10.8□□□□□ -0.68
PNKP-214ENST00000600573 C7orf65Q6ZTY9 151 aa10.79□□□□□ -0.68
PNKP-214ENST00000600573 XP32Q5T750 250 aa10.76□□□□□ -0.69
PNKP-214ENST00000600573 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
PNKP-214ENST00000600573 ATP11AUNQ6ZP68 121 aa10.76□□□□□ -0.69
PNKP-214ENST00000600573 COA5Q86WW8 74 aa10.76□□□□□ -0.69
PNKP-214ENST00000600573 HERC1Q15751 4861 aa10.75□□□□□ -0.69
PNKP-214ENST00000600573 DMAC1Q96GE9 116 aa10.71□□□□□ -0.69
PNKP-214ENST00000600573 ACYP2P14621 99 aa10.67□□□□□ -0.7
PNKP-214ENST00000600573 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
PNKP-214ENST00000600573 SPINK7P58062 85 aa10.61□□□□□ -0.71
PNKP-214ENST00000600573 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
PNKP-214ENST00000600573 Q1T7F1 81 aa10.6□□□□□ -0.71
PNKP-214ENST00000600573 V9GYY9 64 aa10.58□□□□□ -0.72
PNKP-214ENST00000600573 A8MUN3 132 aa10.54□□□□□ -0.72
PNKP-214ENST00000600573 CHKB-CPT1BH3BT56 60 aa10.54□□□□□ -0.72
PNKP-214ENST00000600573 SEC61BP60468 96 aaKnown RBP10.47□□□□□ -0.73
PNKP-214ENST00000600573 LINC01558Q9Y6Z2 57 aa10.4□□□□□ -0.74
PNKP-214ENST00000600573 PSPHP1O15172 72 aa10.39□□□□□ -0.75
PNKP-214ENST00000600573 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
PNKP-214ENST00000600573 LRP2P98164 4655 aa10.37□□□□□ -0.75
PNKP-214ENST00000600573 PRR15LQ9BU68 103 aa10.36□□□□□ -0.75
PNKP-214ENST00000600573 LPAP08519 4548 aa10.36□□□□□ -0.75
PNKP-214ENST00000600573 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
PNKP-214ENST00000600573 HMCN2Q8NDA2 5059 aa10.31□□□□□ -0.76
PNKP-214ENST00000600573 Q5VV11 94 aa10.31□□□□□ -0.76
PNKP-214ENST00000600573 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
PNKP-214ENST00000600573 RBM12B-AS1Q9P1G2 102 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms